Zobrazeno 1 - 10
of 226
pro vyhledávání: '"Nathan M Springer"'
Publikováno v:
PLoS Genetics, Vol 17, Iss 10, p e1009768 (2021)
Transposable elements (TEs) constitute the majority of flowering plant DNA, reflecting their tremendous success in subverting, avoiding, and surviving the defenses of their host genomes to ensure their selfish replication. More than 85% of the sequen
Externí odkaz:
https://doaj.org/article/c6b1e467813e4afc96d9a21d072dd984
Autor:
Yinjie Qiu, Christine H O’Connor, Rafael Della Coletta, Jonathan S Renk, Patrick J Monnahan, Jaclyn M Noshay, Zhikai Liang, Amanda Gilbert, Sarah N Anderson, Suzanne E McGaugh, Nathan M Springer, Candice N Hirsch
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 11, Iss 10 (2021)
AbstractIntact transposable elements (TEs) account for 65% of the maize genome and can impact gene function and regulation. Although TEs comprise the majority of the maize genome and affect important phenotypes, genome-wide patterns of TE polymorphis
Externí odkaz:
https://doaj.org/article/4612470fb4ad4a5d87f6e5745029e5ba
Autor:
Jaclyn M Noshay, Zhikai Liang, Peng Zhou, Peter A Crisp, Alexandre P Marand, Candice N Hirsch, Robert J Schmitz, Nathan M Springer
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 11, Iss 8 (2021)
AbstractAccessible chromatin and unmethylated DNA are associated with many genes and cis-regulatory elements. Attempts to understand natural variation for accessible chromatin regions (ACRs) and unmethylated regions (UMRs) often rely upon alignments
Externí odkaz:
https://doaj.org/article/8c0da28743144c4ea3b8e8220e2f547e
Publikováno v:
PLoS Genetics, Vol 17, Iss 4, p e1009491 (2021)
Fertilization and seed development is a critical time in the plant life cycle, and coordinated development of the embryo and endosperm are required to produce a viable seed. In the endosperm, some genes show imprinted expression where transcripts are
Externí odkaz:
https://doaj.org/article/cd12f5be2abc4956988dc26f10d6663d
Autor:
Jaclyn M Noshay, Sarah N Anderson, Peng Zhou, Lexiang Ji, William Ricci, Zefu Lu, Michelle C Stitzer, Peter A Crisp, Candice N Hirsch, Xiaoyu Zhang, Robert J Schmitz, Nathan M Springer
Publikováno v:
PLoS Genetics, Vol 15, Iss 9, p e1008291 (2019)
DNA methylation and epigenetic silencing play important roles in the regulation of transposable elements (TEs) in many eukaryotic genomes. A majority of the maize genome is derived from TEs that can be classified into different orders and families ba
Externí odkaz:
https://doaj.org/article/09a68ab31ed14bafa5f72dc63ebc7c60
Autor:
Zhi Li, Lisa Coffey, Jacob Garfin, Nathan D Miller, Michael R White, Edgar P Spalding, Natalia de Leon, Shawn M Kaeppler, Patrick S Schnable, Nathan M Springer, Candice N Hirsch
Publikováno v:
PLoS ONE, Vol 14, Iss 8, p e0219528 (2019)
[This corrects the article DOI: 10.1371/journal.pone.0191321.].
Externí odkaz:
https://doaj.org/article/beca4636f0d643729beebf96ceac11f5
Autor:
Lin Li, Katherine Petsch, Rena Shimizu, Sanzhen Liu, Wayne Wenzhong Xu, Kai Ying, Jianming Yu, Michael J Scanlon, Patrick S Schnable, Marja C P Timmermans, Nathan M Springer, Gary J Muehlbauer
Publikováno v:
PLoS Genetics, Vol 14, Iss 2, p e1007234 (2018)
[This corrects the article DOI: 10.1371/journal.pgen.1003202.].
Externí odkaz:
https://doaj.org/article/fb9e0095bd66484ea975d8f05597c341
Autor:
Zhi Li, Lisa Coffey, Jacob Garfin, Nathan D Miller, Michael R White, Edgar P Spalding, Natalia de Leon, Shawn M Kaeppler, Patrick S Schnable, Nathan M Springer, Candice N Hirsch
Publikováno v:
PLoS ONE, Vol 13, Iss 1, p e0191321 (2018)
The environment can influence heterosis, the phenomena in which the offspring of two inbred parents exhibits phenotypic performance beyond the inbred parents for specific traits. In this study we measured 25 traits in a set of 47 maize hybrids and th
Externí odkaz:
https://doaj.org/article/a00a5b6719ef4e51add974362d3a7a89
Autor:
Irina Makarevitch, Amanda J Waters, Patrick T West, Michelle Stitzer, Candice N Hirsch, Jeffrey Ross-Ibarra, Nathan M Springer
Publikováno v:
PLoS Genetics, Vol 11, Iss 10, p e1005566 (2015)
Externí odkaz:
https://doaj.org/article/f6790131201243d4abfb0cca848a768b
Autor:
Steven R Eichten, Nathan M Springer
Publikováno v:
Frontiers in Plant Science, Vol 6 (2015)
DNA methylation is a chromatin modification that is sometimes associated with epigenetic regulation of gene expression. As DNA methylation can be reversible at some loci, it is possible that methylation patterns may change within an organism that is
Externí odkaz:
https://doaj.org/article/79197fbed4414f4e907c7fe1e4f7c2f9