The Role of Tyr-His-Trp Triad and Water Molecule Near the N1-Atom of 2-Hydroperoxycoelenterazine in Bioluminescence of Hydromedusan Photoproteins: Structural and Mutagenesis Study.

Autor: Natashin PV; Photobiology Laboratory, Institute of Biophysics of Siberian Branch of the Russian Academy of Sciences, Federal Research Center 'Krasnoyarsk Science Center' of Siberian Branch of the Russian Academy of Sciences', Krasnoyarsk 660036, Russia., Burakova LP; Photobiology Laboratory, Institute of Biophysics of Siberian Branch of the Russian Academy of Sciences, Federal Research Center 'Krasnoyarsk Science Center' of Siberian Branch of the Russian Academy of Sciences', Krasnoyarsk 660036, Russia.; Institute of Fundamental Biology and Biotechnology, Siberian Federal University, Krasnoyarsk 660041, Russia., Kovaleva MI; Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny 141701, Russia., Shevtsov MB; Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny 141701, Russia., Dmitrieva DA; Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny 141701, Russia., Eremeeva EV; Photobiology Laboratory, Institute of Biophysics of Siberian Branch of the Russian Academy of Sciences, Federal Research Center 'Krasnoyarsk Science Center' of Siberian Branch of the Russian Academy of Sciences', Krasnoyarsk 660036, Russia.; Institute of Fundamental Biology and Biotechnology, Siberian Federal University, Krasnoyarsk 660041, Russia., Markova SV; Photobiology Laboratory, Institute of Biophysics of Siberian Branch of the Russian Academy of Sciences, Federal Research Center 'Krasnoyarsk Science Center' of Siberian Branch of the Russian Academy of Sciences', Krasnoyarsk 660036, Russia.; Institute of Fundamental Biology and Biotechnology, Siberian Federal University, Krasnoyarsk 660041, Russia., Mishin AV; Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny 141701, Russia., Borshchevskiy VI; Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny 141701, Russia.; Joint Institute for Nuclear Research, Dubna 141980, Russia., Vysotski ES; Photobiology Laboratory, Institute of Biophysics of Siberian Branch of the Russian Academy of Sciences, Federal Research Center 'Krasnoyarsk Science Center' of Siberian Branch of the Russian Academy of Sciences', Krasnoyarsk 660036, Russia.

Publikováno v: International journal of molecular sciences [Int J Mol Sci] 2023 Apr 06; Vol. 24 (7). Date of Electronic Publication: 2023 Apr 06.

Crystal structure of semisynthetic obelin-v.

Autor: Larionova MD; Photobiology Laboratory, Institute of Biophysics SB RAS, Federal Research Center 'Krasnoyarsk Science Center SB RAS', Krasnoyarsk, Russia.; iHuman Institute, ShanghaiTech University, Shanghai, China., Wu L; iHuman Institute, ShanghaiTech University, Shanghai, China., Eremeeva EV; Photobiology Laboratory, Institute of Biophysics SB RAS, Federal Research Center 'Krasnoyarsk Science Center SB RAS', Krasnoyarsk, Russia.; Institute of Fundamental Biology and Biotechnology, Siberian Federal University, Krasnoyarsk, Russia., Natashin PV; Photobiology Laboratory, Institute of Biophysics SB RAS, Federal Research Center 'Krasnoyarsk Science Center SB RAS', Krasnoyarsk, Russia., Gulnov DV; Institute of Fundamental Biology and Biotechnology, Siberian Federal University, Krasnoyarsk, Russia., Nemtseva EV; Photobiology Laboratory, Institute of Biophysics SB RAS, Federal Research Center 'Krasnoyarsk Science Center SB RAS', Krasnoyarsk, Russia.; Institute of Fundamental Biology and Biotechnology, Siberian Federal University, Krasnoyarsk, Russia., Liu D; iHuman Institute, ShanghaiTech University, Shanghai, China., Liu ZJ; iHuman Institute, ShanghaiTech University, Shanghai, China.; School of Life Science and Technology, ShanghaiTech University, Shanghai, China., Vysotski ES; Photobiology Laboratory, Institute of Biophysics SB RAS, Federal Research Center 'Krasnoyarsk Science Center SB RAS', Krasnoyarsk, Russia.

Publikováno v: Protein science : a publication of the Protein Society [Protein Sci] 2022 Feb; Vol. 31 (2), pp. 454-469. Date of Electronic Publication: 2021 Nov 29.

Mitrocomin from the jellyfish Mitrocoma cellularia with deleted C-terminal tyrosine reveals a higher bioluminescence activity compared to wild type photoprotein.

Autor: Burakova LP; Photobiology Laboratory, Institute of Biophysics, Russian Academy of Sciences, Siberian Branch, Krasnoyarsk 660036, Russia., Natashin PV; Photobiology Laboratory, Institute of Biophysics, Russian Academy of Sciences, Siberian Branch, Krasnoyarsk 660036, Russia; National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China., Markova SV; Photobiology Laboratory, Institute of Biophysics, Russian Academy of Sciences, Siberian Branch, Krasnoyarsk 660036, Russia., Eremeeva EV; Photobiology Laboratory, Institute of Biophysics, Russian Academy of Sciences, Siberian Branch, Krasnoyarsk 660036, Russia., Malikova NP; Photobiology Laboratory, Institute of Biophysics, Russian Academy of Sciences, Siberian Branch, Krasnoyarsk 660036, Russia., Cheng C; National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China., Liu ZJ; National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China; Institute of Molecular and Clinical Medicine, Kunming Medical University, Kunming 650500, China; iHuman Institute, ShanghaiTech University, Shanghai 201210, China. Electronic address: zjliu@ibp.ac.cn., Vysotski ES; Photobiology Laboratory, Institute of Biophysics, Russian Academy of Sciences, Siberian Branch, Krasnoyarsk 660036, Russia. Electronic address: eugene.vysotski@gmail.com.

Publikováno v: Journal of photochemistry and photobiology. B, Biology [J Photochem Photobiol B] 2016 Sep; Vol. 162, pp. 286-297. Date of Electronic Publication: 2016 Jul 02.

Structures of the Ca2+-regulated photoprotein obelin Y138F mutant before and after bioluminescence support the catalytic function of a water molecule in the reaction.

Autor: Natashin PV; National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, People's Republic of China., Ding W; National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, People's Republic of China., Eremeeva EV; Photobiology Laboratory, Institute of Biophysics, Russian Academy of Sciences, Siberian Branch, Krasnoyarsk, Russian Federation., Markova SV; Photobiology Laboratory, Institute of Biophysics, Russian Academy of Sciences, Siberian Branch, Krasnoyarsk, Russian Federation., Lee J; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA., Vysotski ES; Photobiology Laboratory, Institute of Biophysics, Russian Academy of Sciences, Siberian Branch, Krasnoyarsk, Russian Federation., Liu ZJ; National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, People's Republic of China.

Publikováno v: Acta crystallographica. Section D, Biological crystallography [Acta Crystallogr D Biol Crystallogr] 2014 Mar; Vol. 70 (Pt 3), pp. 720-32. Date of Electronic Publication: 2014 Feb 15.

Oxygen activation of apo-obelin-coelenterazine complex.

Autor: Eremeeva EV; National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, 15 Datun Road, Beijing 100101, China., Natashin PV, Song L, Zhou Y, van Berkel WJ, Liu ZJ, Vysotski ES

Publikováno v: Chembiochem : a European journal of chemical biology [Chembiochem] 2013 Apr 15; Vol. 14 (6), pp. 739-45. Date of Electronic Publication: 2013 Mar 12.