Zobrazeno 1 - 10
of 28
pro vyhledávání: '"Naomi Saichi"'
Autor:
Yuriko Minegishi, Kazuma Kiyotani, Kensaku Nemoto, Yoshikage Inoue, Yoshimi Haga, Risa Fujii, Naomi Saichi, Satoshi Nagayama, Koji Ueda
Publikováno v:
Communications Biology, Vol 5, Iss 1, Pp 1-13 (2022)
An optimized method for mass spectrometry based immunopeptidomics analysis using high-field asymmetric waveform ion mobility spectrometry is presented and identifies 44,815 HLA-bound peptides (HLAp) from colorectal cancer samples.
Externí odkaz:
https://doaj.org/article/750ac77c42f84bf4bff742a48339e0d7
Autor:
Chizu Tanikawa, Koji Ueda, Akari Suzuki, Aritoshi Iida, Ryoichi Nakamura, Naoki Atsuta, Genki Tohnai, Gen Sobue, Naomi Saichi, Yukihide Momozawa, Yoichiro Kamatani, Michiaki Kubo, Kazuhiko Yamamoto, Yusuke Nakamura, Koichi Matsuda
Publikováno v:
Cell Reports, Vol 22, Iss 6, Pp 1473-1483 (2018)
Summary: Recent proteome analyses have provided a comprehensive overview of various posttranslational modifications (PTMs); however, PTMs involving protein citrullination remain unclear. We performed a proteomic analysis of citrullinated proteins, an
Externí odkaz:
https://doaj.org/article/71eb86cdba4b4857835aa8859b5bfc24
Autor:
Koji Ueda, Naomi Saichi, Sachiko Takami, Daechun Kang, Atsuhiko Toyama, Yataro Daigo, Nobuhisa Ishikawa, Nobuoki Kohno, Kenji Tamura, Taro Shuin, Masato Nakayama, Taka-Aki Sato, Yusuke Nakamura, Hidewaki Nakagawa
Publikováno v:
PLoS ONE, Vol 6, Iss 4, p e18567 (2011)
The mass spectrometry-based peptidomics approaches have proven its usefulness in several areas such as the discovery of physiologically active peptides or biomarker candidates derived from various biological fluids including blood and cerebrospinal f
Externí odkaz:
https://doaj.org/article/e0141fc38cd34060a50784feb68d9c30
Autor:
Ryosuke Ochiai, Kentaro Hayashi, Hiroshi Yamamoto, Risa Fujii, Naomi Saichi, Hiroki Shinchi, Tsuyoshi Ishida, Takeshi Honda, Tetsuo Shimizu, Noriyuki Matsutani, Nobuhiko Seki, Masafumi Kawamura, Koji Ueda
Publikováno v:
Cancer Science. 113:3960-3971
To identify liquid biomarkers that predict clinical outcomes of epidermal growth factor receptor-tyrosine kinase inhibitor (EGFR-TKI), we enrolled patients with EGFR gene mutation-positive non-small-cell lung cancer who were intended to receive gefit
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e80d33771e7a840d99c7dfc9c7d754ec
https://doi.org/10.1111/cas.15512
https://doi.org/10.1111/cas.15512
Autor:
Koji Ueda, Yoshiharu Sakai, Hideaki Shimada, Daisuke Saigusa, Satoshi Muraoka, Naomi Saichi, Risa Fujii, Makoto Konishi, Makoto Sumazaki, Satoshi Nagayama, Atsushi Ikeda
Supplementary figure 1. Dynamic range plot of quantified Te-EV proteome. The X axis indicates abundance rank of qualified Te-EV proteome, and the Y axis indicates the relative abundance by the LC/MS analysis. Supplementary figure 2. GO analysis of up
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2a51b8f86591934322d5497e8236989c
https://doi.org/10.1158/1541-7786.22525841
https://doi.org/10.1158/1541-7786.22525841
Autor:
Koji Ueda, Yoshiharu Sakai, Hideaki Shimada, Daisuke Saigusa, Satoshi Muraoka, Naomi Saichi, Risa Fujii, Makoto Konishi, Makoto Sumazaki, Satoshi Nagayama, Atsushi Ikeda
Table S1. Clinical information and protein abundances in LC/MS analysis of the CRC patients and the healthy donors. Table S2: The list of identified 8,565 CRC tissue proteins. Table S3: The list of identified 6,307 CRC Te-EV proteins. Table S3: The l
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::11478da6e44dd2a593ef9604e2dd2cda
https://doi.org/10.1158/1541-7786.22525838
https://doi.org/10.1158/1541-7786.22525838
Autor:
Yoshimi Haga, Masaki Yamada, Risa Fujii, Naomi Saichi, Takashi Yokokawa, Toshihiro Hama, Yoshihiro Hayakawa, Koji Ueda
Publikováno v:
Analytical chemistry. 94(46)
The glycoform of a therapeutic monoclonal antibody (mAb) has a significant impact on its effector function as well as its safety and pharmacokinetics. Glycoform heterogeneity is influenced by various factors, including the producing cells and cell cu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::72090f2f74b2ae43f3078e27ab8cfd40
https://pubmed.ncbi.nlm.nih.gov/36345688
https://pubmed.ncbi.nlm.nih.gov/36345688
Therapeutic monoclonal antibodies (mAbs) are currently the largest and fastest growing category of biopharmaceuticals. Glycosylation of mAbs has a significant impact on their effector functions, as well as on their safety and pharmacokinetics. Hetero
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::86d94ce089f01c0618478638fec75b3f
https://doi.org/10.1101/2021.09.30.462681
https://doi.org/10.1101/2021.09.30.462681
Autor:
Risa Fujii, Yuriko Minegishi, Kensaku Nemoto, Kazuma Kiyotani, Satoshi Nagayama, Yoshimi Haga, Yoshikage Inoue, Koji Ueda, Naomi Saichi
Understanding the properties of human leukocyte antigen (HLA) peptides (HLAp) is essential for cancer precision medicine, while the direct identification of HLAp from a tiny piece of clinical tissues by mass spectrometry (MS) is still confronted with
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c32f36aee73d877b2680cabce73c2c6c
https://doi.org/10.1101/2021.04.09.439118
https://doi.org/10.1101/2021.04.09.439118
Autor:
Satoshi Muraoka, Makoto Konishi, Makoto Sumazaki, Naomi Saichi, Atsushi Ikeda, Yoshiharu Sakai, Koji Ueda, Satoshi Nagayama, Risa Fujii, Hideaki Shimada, Daisuke Saigusa
Publikováno v:
Molecular cancer research : MCR. 19(5)
Accumulating scientific evidences strongly support the importance of cancer-derived extracellular vesicles (EV) in organization of tumor microenvironment and metastatic niches, which are also considered as ideal tools for cancer liquid biopsy. To unc
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7668d4ceb0381a55f44098c406712536
https://pubmed.ncbi.nlm.nih.gov/33579815
https://pubmed.ncbi.nlm.nih.gov/33579815