Zobrazeno 1 - 10
of 13
pro vyhledávání: '"Naoko Karino"'
Autor:
Mayumi Matsubara, Rei Hasegawa, Aya Masaoka, Hiroshi Ide, Hiroaki Terato, and Akira Matsuda, Yoshihiko Ohyama, Tamon Tanaka, Naoko Karino, Satofumi Kurisu
Publikováno v:
Biochemistry. 42:5003-5012
In the accompanying paper [Matsubara, M., et al. (2003) Biochemistry 42, 4993-5002], we have partially purified and characterized rat 5-formyluracil (fU)-DNA glycosylase (FDG). Several lines of evidence have indicated that FDG is a rat homologue of s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2c6a75e7a4976eecb651174166c14a4b
https://doi.org/10.1021/bi0273213
https://doi.org/10.1021/bi0273213
Publikováno v:
Biophysical Chemistry. 95:227-233
To investigate the role of divalent cations in crystal packing, a Dickerson-Drew-type dodecamer with the sequence d(CGCGAATXCGCG), containing 2'-deoxy-5-formyluridine at X, was crystallized under several conditions with Ba(2+) ion instead of Mg(2+) i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8143e3be1c903235765c8b5508b07c85
https://doi.org/10.1016/s0301-4622(01)00259-9
https://doi.org/10.1016/s0301-4622(01)00259-9
Autor:
Naoko Murata-Kamiya, Naoko Karino, Yoshihito Ueno, Akira Matsuda, Hiroyuki Kamiya, Hiroshi Kasai
Publikováno v:
Mutation Research/Genetic Toxicology and Environmental Mutagenesis. 513:213-222
Oxidatively damaged thymine, 5-formyluracil (5-fU), was incorporated into a predetermined site of double-stranded shuttle vectors. The nucleotide sequences in which the modified base was incorporated were 5'-CFTAAG-3' and 5'-CTFAAG-3' (F represents 5
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a56f09b295ef96d595db5b4fe1af14be
https://doi.org/10.1016/s1383-5718(01)00312-6
https://doi.org/10.1016/s1383-5718(01)00312-6
Publikováno v:
Nucleic Acids Research. 29:2456-2463
Oligodeoxynucleotides (ODNs) containing 5-formyl-2′-deoxycytidine (fC) were synthesized by the phosphoramidite method and subsequent oxidation with sodium periodate. The stabilities of duplexes containing A, G, C or T opposite fC were studied by th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bc1758a6da80afd30fb62fbb933c54c5
https://doi.org/10.1093/nar/29.12.2456
https://doi.org/10.1093/nar/29.12.2456
Autor:
Yoshihito Ueno, Naoko Murata-Kamiya, Akira Matsuda, Hiroyuki Kamiya, Hiroshi Kaji, Hiroshi Kasai, Naoko Karino
Publikováno v:
Nucleic Acids Research. 27:4385-4390
5-methyl-2'-deoxycytidine (5-Me-dC) is formed by the enzymatic methylation of dC, primarily in CpG sequences in DNA, and is involved in the regulation of gene expression. In the present study, 5-Me-dC and double-stranded DNA fragments containing 5-Me
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::3fdfef4523c57df96f240d3d5366b55f
https://doi.org/10.1093/nar/27.22.4385
https://doi.org/10.1093/nar/27.22.4385
Autor:
Akira Matsuda, Hiroyuki Kamiya, Naoko Karino, Naoko Murata-Kamiya, Yoshihito Ueno, Hiroshi Kasai
Publikováno v:
Nucleic acids symposium series. (44)
5-Formyluracil, a major oxidized form of thymine, was incorporated into a predetermined site of one of the leading and lagging template strands of a double-stranded vector, and the DNA replication efficiency and the mutation frequency of 5-formylurac
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a37cc18e282933e2b212a0a0766dabbf
https://pubmed.ncbi.nlm.nih.gov/12903278
https://pubmed.ncbi.nlm.nih.gov/12903278
Autor:
Naoko Karino, Tomoko Sunami, Akio Takénaka, Akira Matsuda, T. Sakaue, Satoko Naito, Masaru Tsunoda, Yoshihito Ueno
Publikováno v:
Nucleic acids research. Supplement (2001). (1)
It is known that formylation of thymine base induces purine transition in DNA replication. In order to establish the structural basis for such mutagenesis, crystal structures of two kinds of DNA dodecamers d(CGCGRATf5UCGCG) with f5U = 2'-deoxy-5-form
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::689faa20f615ca7b6f0f4be80a8d6130
https://pubmed.ncbi.nlm.nih.gov/12836373
https://pubmed.ncbi.nlm.nih.gov/12836373
Autor:
Yoshihito Ueno, Hideyoshi Harashima, Hiroyuki Tsuchiya, Naoko Karino, Akira Matsuda, Hiroyuki Kamiya
Publikováno v:
Journal of biochemistry. 132(4)
To examine the mutagenicity of 5-formylcytosine (5-fC), an oxidation product of 5-methylcytosine (5-mC), 5-fC was incorporated into predetermined sites of double-stranded shuttle vectors. The nucleotide sequences in which the modified base was incorp
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::59f1ad99c529f3f0c4b0c21b7d4675e6
https://pubmed.ncbi.nlm.nih.gov/12359069
https://pubmed.ncbi.nlm.nih.gov/12359069
Publikováno v:
Biochemistry. 41(29)
We have carried out an in vitro selection to obtain an allosteric hairpin ribozyme, which has cleavage activity in the presence of an exogenous short oligonucleotide as a regulator. Random sequences were inserted in a region corresponding to the hair
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e49136f707365ed70ef74e085df48d35
https://pubmed.ncbi.nlm.nih.gov/12119023
https://pubmed.ncbi.nlm.nih.gov/12119023
Publikováno v:
Bioconjugate chemistry. 11(6)
To construct the nuclease-resistant oligodeoxynucleotides (ODNs) with natural phosphodiester linkages, we synthesized ODNs that contain 6'alpha-[N-(aminoalkyl)carbamoyloxy]-carbocyclic-thymidines (4, 5, and 6). The stability of these ODNs to nuclease
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6f118d442d7b916a4d4da11e21db912d
https://pubmed.ncbi.nlm.nih.gov/11087344
https://pubmed.ncbi.nlm.nih.gov/11087344