Zobrazeno 1 - 10
of 24
pro vyhledávání: '"Nadya V Pletneva"'
Autor:
Nadya V Pletneva, Vladimir Z Pletnev, Karen S Sarkisyan, Dmitry A Gorbachev, Evgeny S Egorov, Alexander S Mishin, Konstantin A Lukyanov, Zbigniew Dauter, Sergei Pletnev
Publikováno v:
PLoS ONE, Vol 10, Iss 12, p e0145740 (2015)
Phototoxic fluorescent proteins represent a sparse group of genetically encoded photosensitizers that could be used for precise light-induced inactivation of target proteins, DNA damage, and cell killing. Only two such GFP-based fluorescent proteins
Externí odkaz:
https://doaj.org/article/e36b7701a2794df4983a7c5bab7f0b65
Autor:
Sergei Pletnev, Daria M Shcherbakova, Oksana M Subach, Nadya V Pletneva, Vladimir N Malashkevich, Steven C Almo, Zbigniew Dauter, Vladislav V Verkhusha
Publikováno v:
PLoS ONE, Vol 9, Iss 6, p e99136 (2014)
A structural analysis of the recently developed orange fluorescent proteins with novel phenotypes, LSSmOrange (λex/λem at 437/572 nm), PSmOrange (λex/λem at 548/565 nm and for photoconverted form at 636/662 nm) and PSmOrange2 (λex/λem at 546/56
Externí odkaz:
https://doaj.org/article/de82ad2eaef641da82a4fb5459873369
Amino acid residue at the 165th position tunes EYFP chromophore maturation. A structure-based design
Autor:
Vladimir Z. Pletnev, Eugene G. Maksimov, Anastasia V. Mamontova, Elena A. Protasova, Rustam H. Ziganshin, Konstantin A. Lukyanov, Nadya V. Pletneva, Sergei Pletnev, Tatiana R. Simonyan, Liya Muslinkina, Alexey M. Bogdanov
Publikováno v:
Computational and Structural Biotechnology Journal
Computational and Structural Biotechnology Journal, Vol 19, Iss, Pp 2950-2959 (2021)
Computational and Structural Biotechnology Journal, Vol 19, Iss, Pp 2950-2959 (2021)
Graphical abstract
For the whole GFP family, a few cases, when a single mutation in the chromophore environment strongly inhibits maturation, were described. Here we study EYFP-F165G – a variant of the enhanced yellow fluorescent protein – o
For the whole GFP family, a few cases, when a single mutation in the chromophore environment strongly inhibits maturation, were described. Here we study EYFP-F165G – a variant of the enhanced yellow fluorescent protein – o
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e86d1191f9c8ae5e9ff3d8772e885cc6
http://europepmc.org/articles/PMC8163865
http://europepmc.org/articles/PMC8163865
Autor:
Vladimir Z. Pletnev, Jens Meiler, Mikhail S. Baranov, Liya Muslinkina, Nina G. Bozhanova, Alexey S. Gavrikov, Sergei Pletnev, Nadya V. Pletneva, Alexander S. Mishin
Publikováno v:
ACS Chemical Biology. 15:2456-2465
Super-resolution fluorescent imaging in living cells remains technically challenging due in large part to the photodecomposition of fluorescent tags. Recently suggested protein-PAINT is the only su...
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::53840aa9d26f1cdf4d5724036fdd1820
https://doi.org/10.1021/acschembio.0c00440
https://doi.org/10.1021/acschembio.0c00440
Autor:
Yulia K. Agapova, Lubov A. Kost, Tatiana V. Rakitina, Danila V. Kolesov, Irina I. Shemyakina, Vladimir Z. Pletnev, Dmitry A. Ruchkin, Sergei Pletnev, Dmitry M. Chudakov, Alexey M. Bogdanov, Nadya V. Pletneva, Liya Muslinkina
Publikováno v:
International Journal of Biological Macromolecules. 155:551-559
The crystal structure of monomeric red fluorescent protein FusionRed (λex/λem 580/608 mn) has been determined at 1.09 A resolution and revealed two alternative routes of post-translational chemistry, resulting in distinctly different products. The
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ec9db466c765e471b2033351eb2dc0d6
https://doi.org/10.1016/j.ijbiomac.2020.03.244
https://doi.org/10.1016/j.ijbiomac.2020.03.244
Publikováno v:
Russian Journal of Bioorganic Chemistry. 45:187-194
The discovery of fluorescent proteins (FP) in 1962 and the following design of genetically encoded biomarkers and biosensors revolutionized the study of living systems. At present, researchers have access to FPs of a wide range of colors with a wide
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c8e2dd5fa01302d088afa3f9072fabff
https://doi.org/10.1134/s106816201903004x
https://doi.org/10.1134/s106816201903004x
Autor:
Liya, Muslinkina, Alexey S, Gavrikov, Nina G, Bozhanova, Alexander S, Mishin, Mikhail S, Baranov, Jens, Meiler, Nadya V, Pletneva, Vladimir Z, Pletnev, Sergei, Pletnev
Publikováno v:
ACS chemical biology. 15(9)
Super-resolution fluorescent imaging in living cells remains technically challenging, largely due to the photodecomposition of fluorescent tags. The recently suggested protein-PAINT is the only super-resolution technique available for prolonged imagi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::c606b80070705e7e594c753461a853cb
https://pubmed.ncbi.nlm.nih.gov/32809793
https://pubmed.ncbi.nlm.nih.gov/32809793
Autor:
S. F. Arkhipova, Nadya V. Pletneva, I. V. Artemyev, E. A. Goryacheva, Roman G. Efremov, Vladimir Z. Pletnev
Publikováno v:
Russian Journal of Bioorganic Chemistry. 44:640-644
The green fluorescent protein WasCFP with a tryptophan-based chromophore (Thr65-Trp66- Gly67) exhibits considerable pH-dependent changes of spectral properties related to the reversible processes of tryptophan ionization and protonation. The crystal
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::955fe9e516308a6c46c0239ddb992355
https://doi.org/10.1134/s1068162018060079
https://doi.org/10.1134/s1068162018060079
Autor:
Nadya V. Pletneva, N. Nandhagopal, Sergei Pletnev, Nija Mani, Krishnasamy Gunasekaran, S. Vajravijayan
Publikováno v:
International Journal of Biological Macromolecules. 113:329-337
The conversion of starch to maltose is catalysed in plants by β-amylase. The enzymatic mechanism has been well-characterized for the soybean and barley enzymes, which utilise a glutamic acid–glutamate pair. In the present study, we present a surpr
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::39446f8c939356e0f668c2458f91b943
https://doi.org/10.1016/j.ijbiomac.2018.02.138
https://doi.org/10.1016/j.ijbiomac.2018.02.138
Autor:
Karen S. Sarkisyan, S. F. Arkhipova, Konstantin A. Lukyanov, Nadya V. Pletneva, Sergei Pletnev, Roman G. Efremov, Vladimir Z. Pletnev, I. V. Artemyev, E. A. Goryacheva, Alexander S. Mishin
Publikováno v:
Russian Journal of Bioorganic Chemistry. 42:612-618
WasCFP, a pH-dependent green fluorescent protein with a tryptophan-based chromophore (Thr65-Trp66-Gly67) in anionic state, was designed from a cyan precursor mCerulean. In this study, the three-dimensional structure of WasCFP has been determined by a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::56fd5e85540ef13ec695c37072957f63
https://doi.org/10.1134/s1068162016050149
https://doi.org/10.1134/s1068162016050149