Zobrazeno 1 - 10
of 14
pro vyhledávání: '"Nadine, Veith"'
Autor:
Seyed Babak Loghmani, Eric Zitzow, Gene Ching Chiek Koh, Andreas Ulmer, Nadine Veith, Ruth Großeholz, Madlen Rossnagel, Maren Loesch, Ruedi Aebersold, Bernd Kreikemeyer, Tomas Fiedler, Ursula Kummer
Publikováno v:
Microbiology Spectrum, Vol 10, Iss 2 (2022)
ABSTRACT Lactic acid bacteria (LAB) play a significant role in biotechnology, e.g., food industry and also in human health. Many LAB genera have developed a multidrug resistance in the past few years, causing a serious problem in controlling hospital
Externí odkaz:
https://doaj.org/article/cd1cdfcd982a4b8f9416cf476c305add
Autor:
Seyed Babak Loghmani, Nadine Veith, Sven Sahle, Frank T. Bergmann, Brett G. Olivier, Ursula Kummer
Publikováno v:
Metabolites, Vol 12, Iss 1, p 43 (2022)
Genome-scale metabolic models are frequently used in computational biology. They offer an integrative view on the metabolic network of an organism without the need to know kinetic information in detail. However, the huge solution space which comes wi
Externí odkaz:
https://doaj.org/article/76ab4049043d4d4e9231f435a2a8afa8
Autor:
Rossnagel M, Ruedi Aebersold, Gene Koh, Bernd Kreikemeyer, Loghmani Sb, Zitzow E, Loesch M, Ursula Kummer, Ulmer A, Nadine Veith, Ruth Großeholz, Tomas Fiedler
Lactic acid bacteria (LAB) play a significant role in biotechnology, e.g. food industry, but also in human health. Many LAB genera have developed a multidrug resistance in the past few years, becoming a serious problem in controlling hospital germs a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::f434ab9f643dccdd7595f421c040c524
https://doi.org/10.1101/2021.07.07.451427
https://doi.org/10.1101/2021.07.07.451427
Publikováno v:
New Phytologist. 222:1392-1404
Sulfur assimilation is central to the survival of plants and has been studied under different environmental conditions. Multiple studies have been published trying to determine rate-limiting or controlling steps in this pathway. However, the picture
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::004f386b1b14b1836c0d51eddc056c59
https://doi.org/10.1111/nph.15704
https://doi.org/10.1111/nph.15704
Autor:
Nadine Veith, Anna Feldman-Salit, Vlad Cojocaru, Stefan Henrich, Ursula Kummer, Rebecca C Wade
Publikováno v:
PLoS Computational Biology, Vol 9, Iss 7, p e1003159 (2013)
Pyruvate kinase (PYK) is a critical allosterically regulated enzyme that links glycolysis, the primary energy metabolism, to cellular metabolism. Lactic acid bacteria rely almost exclusively on glycolysis for their energy production under anaerobic c
Externí odkaz:
https://doaj.org/article/466e3faf1a6c49e89b43f69f130a89f6
Publikováno v:
Journal of Biotechnology, 327, 54-63. Elsevier
J Biotechnol
Grigaitis, P, Olivier, B G, Fiedler, T, Teusink, B, Kummer, U & Veith, N 2021, ' Protein cost allocation explains metabolic strategies in Escherichia coli ', Journal of Biotechnology, vol. 327, pp. 54-63 . https://doi.org/10.1016/j.jbiotec.2020.11.003
J Biotechnol
Grigaitis, P, Olivier, B G, Fiedler, T, Teusink, B, Kummer, U & Veith, N 2021, ' Protein cost allocation explains metabolic strategies in Escherichia coli ', Journal of Biotechnology, vol. 327, pp. 54-63 . https://doi.org/10.1016/j.jbiotec.2020.11.003
In-depth understanding of microbial growth is crucial for the development of new advances in biotechnology and for combating microbial pathogens. Condition-specific proteome expression is central to microbial physiology and growth. A multitude of pro
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::36466806cc876279232264d139b50194
https://pubmed.ncbi.nlm.nih.gov/33309962
https://pubmed.ncbi.nlm.nih.gov/33309962
Autor:
Priyata Kalra, Luis U. Aguilera, Frank Bergmann, Giovanni Dalmasso, Nadine Veith, Ruth Großeholz, Sven Sahle, Tobias Elsässer, Pascal Holzheu, Ursula Kummer, Sinan Elmas
Publikováno v:
Biophysical chemistry. 245
Intracellular calcium oscillations have been widely studied. It is assumed that information is conveyed in the frequency, amplitude and shape of these oscillations. In particular, calcium signalling in mammalian liver cells has repeatedly been report
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9ce0ad9d28c94bb6b86ad5eead7339bc
https://pubmed.ncbi.nlm.nih.gov/30529877
https://pubmed.ncbi.nlm.nih.gov/30529877
Autor:
Ingolf F. Nes, Bas Teusink, Jennifer Levering, Nadine Veith, Helge Holo, Jeroen Hugenholtz, Ursula Kummer, Margrete Solheim, Koen W. A. van Grinsven, Brett G. Olivier, Ruth Grosseholz
Publikováno v:
Applied and Environmental Microbiology, 81(5), 1622-1633. American Society for Microbiology
Veith, N, Solheim, M, van Grinsven, K W A, Olivier, B G, Levering, J, Grosseholz, R, Hugenholtz, J, Holo, H, Nes, I, Teusink, B & Kummer, U 2015, ' Using a genome-scale metabolic model of Enterococcus faecalis V583 to assess amino acid uptake and its impact on central metabolism ', Applied and Environmental Microbiology, vol. 81, no. 5, pp. 1622-1633 . https://doi.org/10.1128/AEM.03279-14
Veith, N, Solheim, M, van Grinsven, K W A, Olivier, B G, Levering, J, Grosseholz, R, Hugenholtz, J, Holo, H, Nes, I, Teusink, B & Kummer, U 2015, ' Using a genome-scale metabolic model of Enterococcus faecalis V583 to assess amino acid uptake and its impact on central metabolism ', Applied and Environmental Microbiology, vol. 81, no. 5, pp. 1622-1633 . https://doi.org/10.1128/AEM.03279-14
Increasing antibiotic resistance in pathogenic bacteria necessitates the development of new medication strategies. Interfering with the metabolic network of the pathogen can provide novel drug targets but simultaneously requires a deeper and more det
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fd9c052af477a8e666dadce1f224d5eb
https://hdl.handle.net/11245/1.497947
https://hdl.handle.net/11245/1.497947
Autor:
Ching-Chiek Koh, Brett G. Olivier, Ruedi Aebersold, Olga T. Schubert, Ben C. Collins, Ursula Kummer, Frank Bergmann, Madlen Strauss, Bernd Kreikemeyer, Ruth Großeholz, Tomas Fiedler, Nadine Veith
Publikováno v:
NPJ systems biology and applications. Nature Publishing Group
npj Systems Biology and Applications, 2 (1)
Großeholz, R, Koh, C-C, Veith, N, Fiedler, T, Strauss, M, Olivier, B, Collins, B C, Schubert, O T, Bergmann, F, Kreikemeyer, B, Aebersold, R & Kummer, U 2016, ' Integrating highly quantitative proteomics and genome-scale metabolic modeling to study pH adaptation in the human pathogen Enterococcus faecalis ', npj Systems Biology and Applications, vol. 2 . https://doi.org/10.1038/npjsba.2016.17
Grosseholz, R, Ching-Chiek, K, Veith, N, Fiedler, T, Strauss, M, Olivier, B G, Collins, B C, Schubert, O T, Bergmann, F, Kreikemeyer, B, Aebersold, R & Kummer, U 2016, ' Integrating highly quantitative proteomics and genome-scale metabolic modeling to study pH adaptation in the human pathogen Enterococcus faecalis ', NPJ systems biology and applications . https://doi.org/10.1038/npjsba.2016.17
npj Systems Biology and Applications, 2 (1)
Großeholz, R, Koh, C-C, Veith, N, Fiedler, T, Strauss, M, Olivier, B, Collins, B C, Schubert, O T, Bergmann, F, Kreikemeyer, B, Aebersold, R & Kummer, U 2016, ' Integrating highly quantitative proteomics and genome-scale metabolic modeling to study pH adaptation in the human pathogen Enterococcus faecalis ', npj Systems Biology and Applications, vol. 2 . https://doi.org/10.1038/npjsba.2016.17
Grosseholz, R, Ching-Chiek, K, Veith, N, Fiedler, T, Strauss, M, Olivier, B G, Collins, B C, Schubert, O T, Bergmann, F, Kreikemeyer, B, Aebersold, R & Kummer, U 2016, ' Integrating highly quantitative proteomics and genome-scale metabolic modeling to study pH adaptation in the human pathogen Enterococcus faecalis ', NPJ systems biology and applications . https://doi.org/10.1038/npjsba.2016.17
Genome-scale metabolic models represent the entirety of metabolic reactions of an organism based on the annotation of the respective genome. These models commonly allow all reactions to proceed concurrently, disregarding the fact that at no point all
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b69f3f3aac1f6b08ad67452ae8143013
https://research.vu.nl/en/publications/d07de9c4-d54b-4908-92a4-e5fb8d5d9f65
https://research.vu.nl/en/publications/d07de9c4-d54b-4908-92a4-e5fb8d5d9f65
Autor:
Bas Teusink, Koen W. A. van Grinsven, Silvio Hering, Antje Sieg, Jennifer Levering, Ursula Kummer, Nadine Veith, Bernd Kreikemeyer, Tomas Fiedler, Jeroen Hugenholtz, Brett G. Olivier, Lara Klett
Publikováno v:
Levering, J, Fiedler, T, Sieg, A, van Grinsven, K W, Hering, S, Veith, N, Olivier, B G, Klett, L, Hugenholtz, J, Teusink, B, Kreikemeyer, B & Kummer, U 2016, ' Genome-scale reconstruction of the Streptococcus pyogenes M49 metabolic network reveals growth requirements and indicates potential drug targets. ', Journal of Biotechnology, vol. 232, pp. 25-37 . https://doi.org/10.1016/j.jbiotec.2016.01.035
Journal of Biotechnology, 232, 25-37. Elsevier
Journal of Biotechnology, 232, 25-37. Elsevier
Genome-scale metabolic models comprise stoichiometric relations between metabolites, as well as associations between genes and metabolic reactions and facilitate the analysis of metabolism. We computationally reconstructed the metabolic network of th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9bdf3153986eed08153482cddf1d502e
https://research.vu.nl/en/publications/f9fc6888-0220-40ab-a51b-99c5b9e04944
https://research.vu.nl/en/publications/f9fc6888-0220-40ab-a51b-99c5b9e04944