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Natural selection and recombination at host-interacting lipoprotein loci drive genome diversification of Lyme disease and related bacteria.

Autor: Akther S; Graduate Center and Hunter College, City University of New York, New York, New York, USA., Mongodin EF; University of Maryland School of Medicine, Baltimore, Maryland, USA., Morgan RD; New England BioLabs, Ipswich, Massachusetts, USA., Di L; Graduate Center and Hunter College, City University of New York, New York, New York, USA., Yang X; Department of Medicine, Renaissance School of Medicine, Stony Brook University (SUNY), Stony Brook, New York, USA., Golovchenko M; Biology Centre Czech Academy of Sciences, Institute of Parasitology, České Budějovice, Czech Republic., Rudenko N; Biology Centre Czech Academy of Sciences, Institute of Parasitology, České Budějovice, Czech Republic., Margos G; Bavarian Health and Food Safety Authority and German National Reference Centre for Borrelia, Oberschleissheim, Bavaria, Germany., Hepner S; Bavarian Health and Food Safety Authority and German National Reference Centre for Borrelia, Oberschleissheim, Bavaria, Germany., Fingerle V; Bavarian Health and Food Safety Authority and German National Reference Centre for Borrelia, Oberschleissheim, Bavaria, Germany., Kawabata H; National Institute of Infectious Diseases, Tokyo, Japan., Norte AC; Department of Life Sciences, University of Coimbra, MARE-Marine and Environmental Sciences Centre, Coimbra, Portugal., de Carvalho IL; Centre for Vector and Infectious Diseases Research, Águas de Moura, Portugal., Núncio MS; Centre for Vector and Infectious Diseases Research, Águas de Moura, Portugal., Marques A; National Institute of Allergy and Infectious Diseases, Bethesda, Maryland, USA., Schutzer SE; New Jersey Medical School, Newark, New Jersey, USA., Fraser CM; University of Maryland School of Medicine, Baltimore, Maryland, USA., Luft BJ; Department of Medicine, Renaissance School of Medicine, Stony Brook University (SUNY), Stony Brook, New York, USA., Casjens SR; University of Utah School of Medicine and School of Biological Sciences, Salt Lake City, Utah, USA., Qiu W; Graduate Center and Hunter College, City University of New York, New York, New York, USA.; Weill Cornell Medical College, New York, New York, USA.

Publikováno v: MBio [mBio] 2024 Sep 11; Vol. 15 (9), pp. e0174924. Date of Electronic Publication: 2024 Aug 15.

Viral genetic clustering and transmission dynamics of the 2022 mpox outbreak in Portugal.

Autor: Borges V; Genomics and Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Duque MP; Epidemiology and Statistics Division, Directorate-General of Health, Lisbon, Portugal.; Pathogen Dynamics Group, Department of Genetics, University of Cambridge, Cambridge, United Kingdom., Martins JV; Epidemiology and Statistics Division, Directorate-General of Health, Lisbon, Portugal., Vasconcelos P; Public Health Emergency Centre, Directorate-General of Health, Lisbon, Portugal., Ferreira R; Genomics and Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Sobral D; Genomics and Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Pelerito A; Emergency Response and Biopreparedness Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., de Carvalho IL; Emergency Response and Biopreparedness Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Núncio MS; Emergency Response and Biopreparedness Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Borrego MJ; National Reference Laboratory for Sexually Transmitted Infections, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Roemer C; Biozentrum, University of Basel, Basel, Switzerland.; Swiss Institute of Bioinformatics, Basel, Switzerland., Neher RA; Biozentrum, University of Basel, Basel, Switzerland.; Swiss Institute of Bioinformatics, Basel, Switzerland., O'Driscoll M; Pathogen Dynamics Group, Department of Genetics, University of Cambridge, Cambridge, United Kingdom., Rocha R; National Reference Laboratory for Sexually Transmitted Infections, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Lopo S; National Reference Laboratory for Sexually Transmitted Infections, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Neves R; National Reference Laboratory for Sexually Transmitted Infections, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Palminha P; National Reference Laboratory for Sexually Transmitted Infections, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Coelho L; Genomics and Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Nunes A; Genomics and Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal.; Veterinary and Animal Research Centre (CECAV), Faculty of Veterinary Medicine, Lusófona University, Lisbon, Portugal., Isidro J; Genomics and Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Pinto M; Genomics and Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Santos JD; Genomics and Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Mixão V; Genomics and Bioinformatics Unit, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Santos D; Technology and Innovation Unit, Department of Human Genetics, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Duarte S; Technology and Innovation Unit, Department of Human Genetics, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Vieira L; Technology and Innovation Unit, Department of Human Genetics, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Martins F; Technical Board, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Machado J; Department Coordination, Department of Infectious Diseases, National Institute of Health Doutor Ricardo Jorge (INSA), Lisbon, Portugal., Veríssimo VC; Epidemiology and Statistics Division, Directorate-General of Health, Lisbon, Portugal.; Public Health Unit, ACES Cascais, ARSLVT, Cascais, Portugal., Grau B; Epidemiology and Statistics Division, Directorate-General of Health, Lisbon, Portugal.; Public Health Emergency Centre, Directorate-General of Health, Lisbon, Portugal.; ECDC Fellowship Programme, Field Epidemiology path (EPIET), European Centre for Disease Prevention and Control (ECDC), Solna, Sweden.; Directorate of Information and Analysis, Directorate-General of Health, Lisbon, Portugal., Peralta-Santos A; Directorate of Information and Analysis, Directorate-General of Health, Lisbon, Portugal.; Comprehensive Health Research Centre (CHRC), Escola Nacional de Saúde Pública, Universidade NOVA de Lisboa, Lisbon, Portugal., Neves J; Serviço de Dermatovenereologia, Consulta de DST, Centro Hospitalar Universitário de Lisboa Central, Lisbon, Portugal., Caldeira M; Serviço de Dermatovenereologia, Consulta de DST, Centro Hospitalar Universitário de Lisboa Central, Lisbon, Portugal., Pestana M; Serviço de Dermatovenereologia, Consulta de DST, Centro Hospitalar Universitário de Lisboa Central, Lisbon, Portugal., Fernandes C; Serviço de Dermatovenereologia, Consulta de DST, Centro Hospitalar Universitário de Lisboa Central, Lisbon, Portugal., Caria J; Serviço de Doenças Infeciosas, Hospital de Curry Cabral, Centro Hospitalar Universitário de Lisboa Central, Lisbon, Portugal., Pinto R; Serviço de Doenças Infeciosas, Hospital de Curry Cabral, Centro Hospitalar Universitário de Lisboa Central, Lisbon, Portugal., Póvoas D; Serviço de Doenças Infeciosas, Hospital de Curry Cabral, Centro Hospitalar Universitário de Lisboa Central, Lisbon, Portugal.; Instituto Gulbenkian de Ciência, Oeiras, Portugal., Maltez F; Serviço de Doenças Infeciosas, Hospital de Curry Cabral, Centro Hospitalar Universitário de Lisboa Central, Lisbon, Portugal., Sá AI; Unidade de Doenças Sexualmente Transmissíveis da Lapa, Lisbon, Portugal., Salvador MB; 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Publikováno v: Nature medicine [Nat Med] 2023 Oct; Vol. 29 (10), pp. 2509-2517. Date of Electronic Publication: 2023 Sep 11.