Optimization of Genotyping‐by‐Sequencing (GBS) for Germplasm Fingerprinting and Trait Mapping in Faba Bean

Autor: Hailin Zhang, Lavinia I. Fechete, Axel Himmelbach, Anja Poehlein, Ulrike Lohwasser, Andreas Börner, Fouad Maalouf, Shiv Kumar, Hamid Khazaei, Nils Stein, Murukarthick Jayakodi

Publikováno v: Legume Science, Vol 6, Iss 3, Pp n/a-n/a (2024)

ABSTRACT Faba bean (Vicia faba L.) is an important pulse crop with a wide range of agroecological adaptations. The development of genomic tools and a comprehensive catalog of extant genetic diversity are crucial for developing improved faba bean cult

Externí odkaz: https://doaj.org/article/7738e5bd48944fe6985ff03a71d265af

Aegilops sharonensis genome-assisted identification of stem rust resistance gene Sr62

Autor: Guotai Yu, Oadi Matny, Nicolas Champouret, Burkhard Steuernagel, Matthew J. Moscou, Inmaculada Hernández-Pinzón, Phon Green, Sadiye Hayta, Mark Smedley, Wendy Harwood, Ngonidzashe Kangara, Yajuan Yue, Catherine Gardener, Mark J. Banfield, Pablo D. Olivera, Cole Welchin, Jamie Simmons, Eitan Millet, Anna Minz-Dub, Moshe Ronen, Raz Avni, Amir Sharon, Mehran Patpour, Annemarie F. Justesen, Murukarthick Jayakodi, Axel Himmelbach, Nils Stein, Shuangye Wu, Jesse Poland, Jennifer Ens, Curtis Pozniak, Miroslava Karafiátová, István Molnár, Jaroslav Doležel, Eric R. Ward, T. Lynne Reuber, Jonathan D. G. Jones, Martin Mascher, Brian J. Steffenson, Brande B. H. Wulff

Publikováno v: Nature Communications, Vol 13, Iss 1, Pp 1-13 (2022)

Aegilops sharonensis is a wild diploid relative of wheat. Here, the authors assemble the genome of Ae. sharonensis and use the assembly as an aid to clone the Ae. sharonensis-derived stem rust resistance gene Sr62 in the allohexaploid genome of wheat

Externí odkaz: https://doaj.org/article/cfcdc096f4244a3ba8880eee162f1e12

Comparative transcriptome analysis of heat stress responsiveness between two contrasting ginseng cultivars

Autor: Murukarthick Jayakodi, Sang-Choon Lee, Tae-Jin Yang

Publikováno v: Journal of Ginseng Research, Vol 43, Iss 4, Pp 572-579 (2019)

Background: Panax ginseng has been used in traditional medicine to strengthen the body and mental well-being of humans for thousands of years. Many elite ginseng cultivars have been developed, and ginseng cultivation has become well established durin

Externí odkaz: https://doaj.org/article/f325e78263c9495abf64ddd4fa17cb11

Ginseng Genome Database: an open-access platform for genomics of Panax ginseng

Autor: Murukarthick Jayakodi, Beom-Soon Choi, Sang-Choon Lee, Nam-Hoon Kim, Jee Young Park, Woojong Jang, Meiyappan Lakshmanan, Shobhana V. G. Mohan, Dong-Yup Lee, Tae-Jin Yang

Publikováno v: BMC Plant Biology, Vol 18, Iss 1, Pp 1-7 (2018)

Abstract Background The ginseng (Panax ginseng C.A. Meyer) is a perennial herbaceous plant that has been used in traditional oriental medicine for thousands of years. Ginsenosides, which have significant pharmacological effects on human health, are t

Externí odkaz: https://doaj.org/article/b38e4088d25145da8fd2f7b606d947ec

The giant diploid faba genome unlocks variation in a global protein crop

Autor: Murukarthick Jayakodi, Agnieszka A. Golicz, Jonathan Kreplak, Lavinia I. Fechete, Deepti Angra, Petr Bednář, Elesandro Bornhofen, Hailin Zhang, Raphaël Boussageon, Sukhjiwan Kaur, Kwok Cheung, Jana Čížková, Heidrun Gundlach, Asis Hallab, Baptiste Imbert, Gabriel Keeble-Gagnère, Andrea Koblížková, Lucie Kobrlová, Petra Krejčí, Troels W. Mouritzen, Pavel Neumann, Marcin Nadzieja, Linda Kærgaard Nielsen, Petr Novák, Jihad Orabi, Sudharsan Padmarasu, Tom Robertson-Shersby-Harvie, Laura Ávila Robledillo, Andrea Schiemann, Jaakko Tanskanen, Petri Törönen, Ahmed O. Warsame, Alexander H. J. Wittenberg, Axel Himmelbach, Grégoire Aubert, Pierre-Emmanuel Courty, Jaroslav Doležel, Liisa U. Holm, Luc L. Janss, Hamid Khazaei, Jiří Macas, Martin Mascher, Petr Smýkal, Rod J. Snowdon, Nils Stein, Frederick L. Stoddard, Jens Stougaard, Nadim Tayeh, Ana M. Torres, Björn Usadel, Ingo Schubert, Donal Martin O’Sullivan, Alan H. Schulman, Stig Uggerhøj Andersen

Publikováno v: Jayakodi, M, Golicz, A A, Kreplak, J, Fechete, L I, Angra, D, Bednář, P, Bornhofen, E, Zhang, H, Boussageon, R, Kaur, S, Cheung, K, Čížková, J, Gundlach, H, Hallab, A, Imbert, B, Keeble-Gagnère, G, Koblížková, A, Kobrlová, L, Krejčí, P, Mouritzen, T W, Neumann, P, Nadzieja, M, Nielsen, L K, Novák, P, Orabi, J, Padmarasu, S, Robertson-Shersby-Harvie, T, Robledillo, L Á, Schiemann, A, Tanskanen, J, Törönen, P, Warsame, A O, Wittenberg, A H J, Himmelbach, A, Aubert, G, Courty, P-E, Doležel, J, Holm, L U, Janss, L L, Khazaei, H, Macas, J, Mascher, M, Smýkal, P, Snowdon, R J, Stein, N, Stoddard, F L, Stougaard, J, Tayeh, N, Torres, A M, Usadel, B, Schubert, I, O'Sullivan, D M, Schulman, A H & Andersen, S U 2023, ' The giant diploid faba genome unlocks variation in a global protein crop ', Nature, vol. 615, no. 7953, pp. 652-659 . https://doi.org/10.1038/s41586-023-05791-5
Nature 615(7953), 652-659 (2023). doi:10.1038/s41586-023-05791-5
Natureevents directory, 615(7953):652-659

Increasing the proportion of locally produced plant protein in currently meat-rich diets could substantially reduce greenhouse gas emissions and loss of biodiversity1. However, plant protein production is hampered by the lack of a cool-season legume

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::86317860227337f9a4ae7cefe8dda0ff
https://pure.au.dk/portal/da/publications/the-giant-diploid-faba-genome-unlocks-variation-in-a-global-protein-crop(97e8d652-935b-4a73-b127-019025997e6d).html