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Additional file 1 of TrEMOLO: accurate transposable element allele frequency estimation using long-read sequencing data combining assembly and mapping-based approaches

Autor: Mohamed, Mourdas, Sabot, François, Varoqui, Marion, Mugat, Bruno, Audouin, Katell, Pélisson, Alain, Fiston-Lavier, Anna-Sophie, Chambeyron, Séverine

Additional file 1: Fig. S1. Schematicrepresentation of TrEMOLO method for TE detection. Fig. S2. Schematic representation to get benchmarking datasets. Fig. S3. Impact of down-sampling on lowfrequency TE detection. Table S1. Primer sequences used for

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b1972a629fb78f22d5e3ac7230036001

Engrailed controls the organization of the ventral nerve cord through frazzled regulation

Autor: Joly, Willy, Mugat, Bruno, Maschat, Florence

Publikováno v: In Developmental Biology 2007 301(2):542-554

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The somatic piRNA pathway controls germline transposition over generations

Autor: Barckmann, Bridlin, El-Barouk, Marianne, Pélisson, Alain, Mugat, Bruno, Li, Blaise, Franckhauser, Céline, Fiston Lavier, Anna-Sophie, Mirouze, Marie, Fablet, Marie, Chambeyron, Séverine

Publikováno v: Nucleic Acids Research
Nucleic Acids Research, Oxford University Press, 2018, 46 (18), pp.9524-9536. ⟨10.1093/nar/gky761⟩
Nucleic Acids Research, 2018, 46 (18), pp.9524-9536. ⟨10.1093/nar/gky761⟩

International audience; Transposable elements (TEs) are parasitic DNA sequences that threaten genome integrity by replicative transposition in host gonads. The Piwi-interacting RNAs (piRNAs) pathway is assumed to maintain Drosophila genome homeostasi

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::a8553ac1d26e7cfbeab04485f06750ed
https://pubmed.ncbi.nlm.nih.gov/30312469