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Improving average ranking precision in user searches for biomedical research datasets

Autor: Teodoro, Douglas, Mottin, Luc, Gobeill, Julien, Gaudinat, Arnaud, Vachon, Thérèse, Ruch, Patrick

Availability of research datasets is keystone for health and life science study reproducibility and scientific progress. Due to the heterogeneity and complexity of these data, a main challenge to be overcome by research data management systems is to

Externí odkaz: http://arxiv.org/abs/1709.03061

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Akademický článek

Comparing Sequence-Based and Literature Based Pathogenicity Scoring Methods for Human Variants.

Autor: MOTTIN, Luc, NADERI, Nona, MOTTAZ, Anaïs, MICHEL, Pierre-André, BEEN, Gerieke, JOHANSSON, Lennart, SWERTZ, Morris, STUBBS, Andrew, PASCHE, Emilie, GOBEILL, Julien, RUCHa, Patrick

Publikováno v: Studies in Health Technology & Informatics; 2024, Vol. 316, p1684-1688, 5p

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CINECA Curation-support application for care planning D5.4

Autor: Ruch, Patrick, Naderi, Nona, Mottin, Luc, Pasche, Emilie, Mottaz, Anais

This deliverable aims at designing and evaluating a curation support system to help clinicians to decide which treatments should be considered given a set of somatic/germline mutations and some particular clinical conditions (e.g. diagnosis). It buil

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c4421b9d0e5c1867637b2444f83d102d

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Multilingual RECIST classification of radiology reports using supervised learning

Autor: Mottin, Luc, Goldman, Jean-Philippe, Jäggli, Christoph, Achermann, Rita, Gobeill, Julien, Knafou, Julien, Ehrsam, Julien, Wicky, Alexandre, Gérard, Camille L, Schwenk, Tanja, Charrier, Mélinda, Tsantoulis, Petros, Lovis, Christian, Leichtle, Alexander, Kiessling, Michael K, Michielin, Olivier, Pradervand, Sylvain, Foufi, Vasiliki, Ruch, Patrick

Publikováno v: Mottin, Luc; Goldman, Jean-Philippe; Jäggli, Christoph; Achermann, Rita; Gobeill, Julien; Knafou, Julien; Ehrsam, Julien; Wicky, Alexandre; Gérard, Camille L; Schwenk, Tanja; Charrier, Mélinda; Tsantoulis, Petros; Lovis, Christian; Leichtle, Alexander; Kiessling, Michael K; Michielin, Olivier; Pradervand, Sylvain; Foufi, Vasiliki; Ruch, Patrick (2023). Multilingual RECIST classification of radiology reports using supervised learning. Frontiers in digital health, 5(1195017), p. 1195017. Frontiers Media 10.3389/fdgth.2023.1195017

OBJECTIVES The objective of this study is the exploration of Artificial Intelligence and Natural Language Processing techniques to support the automatic assignment of the four Response Evaluation Criteria in Solid Tumors (RECIST) scales based on radi

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f33f04a77b138efcecc8b099ca8a0ea6
https://boris.unibe.ch/184295/1/fdgth-05-1195017.pdf

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Akademický článek

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Accueillir des publics LGBTIQ + dans les bibliothèques de Suisse romande: retours d’expérience des professionnel·le·x·s et des premier·ère·x·s concerné·e·x·s

Autor: Swali, Samia, Mottin, Luc, Pelletier, Elise

Cette recherche explore les pratiques d’inclusion des publics LGBTIQ+ des bibliothèques romandes. Elle repose sur un double constat. Tout d’abord, la persistance des discriminations subies par la population LGBTIQ+ en Suisse. Ensuite, l’absenc

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od_______805::ca1cc4fd3df01a2253f23befd787f8c9
http://doc.rero.ch/record/329728/files/Swali-M_moire-Vdef.pdf

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Text-Mining Services of the Swiss Variant Interpretation Platform for Oncology

Autor: Caucheteur, Déborah, Gobeill, Julien, Mottaz, Anaïs, Pasche, Emilie, Michel, Pierre-André, Mottin, Luc, Stekhoven, Daniel J., Barbié, Valérie, Ruch, Patrick

Publikováno v: Studies in Health Technology and Informatics, 270
Digital Personalized Health and Medicine

The Swiss Variant Interpretation Platform for Oncology is a centralized, joint and curated database for clinical somatic variants piloted by a board of Swiss healthcare institutions and operated by the SIB Swiss Institute of Bioinformatics. To suppor

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::12cb1a7bb3824db8450213b451782b5c

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Akademický článek

Triage by ranking to support the curation of protein interactions.

Autor: Mottin, Luc^1,2 (AUTHOR) luc.mottin@hesge.ch, Pasche, Emilie^1,2 (AUTHOR), Gobeill, Julien^1,2 (AUTHOR), Rech de Laval, Valentine^3,4 (AUTHOR), Gleizes, Anne³ (AUTHOR), Michel, Pierre-André³ (AUTHOR), Bairoch, Amos^3,4 (AUTHOR), Gaudet, Pascale^3,4 (AUTHOR) pascale.gaudet@sib.swiss, Ruch, Patrick^1,2 (AUTHOR) ruch@hesge.ch

Publikováno v: Database: The Journal of Biological Databases & Curation. 2017, Vol. 2017 Issue 1, p1-11. 11p. 2 Color Photographs, 1 Diagram, 3 Charts, 1 Graph.

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