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Structure- and Interaction-Based Design of Anti-SARS-CoV-2 Aptamers.

Autor: Mironov V; Department of Chemistry, Lomonosov Moscow State University, Moscow, 119991, Russia.; Department of Chemistry, Kyungpook National University, Daegu, 702-701, South Korea., Shchugoreva IA; Laboratory for Digital Controlled Drugs and Theranostics, Federal Research Center KSC SB RAS, Krasnoyarsk, 660036, Russia.; School of Non-Ferrous Metals and Materials Science, Siberian Federal University, Krasnoyarsk, 660041, Russia.; Laboratory for Biomolecular and Medical Technologies, Krasnoyarsk State Medical University, Krasnoyarsk, 660022, Russia., Artyushenko PV; Laboratory for Digital Controlled Drugs and Theranostics, Federal Research Center KSC SB RAS, Krasnoyarsk, 660036, Russia.; School of Non-Ferrous Metals and Materials Science, Siberian Federal University, Krasnoyarsk, 660041, Russia.; Laboratory for Biomolecular and Medical Technologies, Krasnoyarsk State Medical University, Krasnoyarsk, 660022, Russia., Morozov D; Nanoscience Center and Department of Chemistry, University of Jyväskylä, Jyväskylä, 40014, Finland., Borbone N; Department of Pharmacy, University of Naples Federico II, Naples, 80138, Italy., Oliviero G; Department of Molecular Medicine and Medical Biotechnologies, University of Naples Federico II, Naples, 80131, Italy., Zamay TN; Laboratory for Biomolecular and Medical Technologies, Krasnoyarsk State Medical University, Krasnoyarsk, 660022, Russia., Moryachkov RV; Laboratory for Digital Controlled Drugs and Theranostics, Federal Research Center KSC SB RAS, Krasnoyarsk, 660036, Russia.; Laboratory of Physics of Magnetic Phenomena, Kirensky Institute of Physics, 660012, Krasnoyarsk, Russia., Kolovskaya OS; Laboratory for Digital Controlled Drugs and Theranostics, Federal Research Center KSC SB RAS, Krasnoyarsk, 660036, Russia.; Laboratory for Biomolecular and Medical Technologies, Krasnoyarsk State Medical University, Krasnoyarsk, 660022, Russia., Lukyanenko KA; Laboratory for Digital Controlled Drugs and Theranostics, Federal Research Center KSC SB RAS, Krasnoyarsk, 660036, Russia.; Laboratory for Biomolecular and Medical Technologies, Krasnoyarsk State Medical University, Krasnoyarsk, 660022, Russia.; School of Fundamental Biology and Biotechnology, Siberian Federal University, Krasnoyarsk, 660041, Russia., Song Y; Department of Chemical Biology, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, 361005, P. R. China., Merkuleva IA; State Research Center of Virology and Biotechnology VECTOR, Rospotrebnadzor, Koltsovo, 630559, Russia., Zabluda VN; Laboratory of Physics of Magnetic Phenomena, Kirensky Institute of Physics, 660012, Krasnoyarsk, Russia., Peters G; NRC Kurchatov Institute, Moscow, 117 259, Russia., Koroleva LS; Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, 630090, Russia., Veprintsev DV; Laboratory for Digital Controlled Drugs and Theranostics, Federal Research Center KSC SB RAS, Krasnoyarsk, 660036, Russia., Glazyrin YE; Laboratory for Digital Controlled Drugs and Theranostics, Federal Research Center KSC SB RAS, Krasnoyarsk, 660036, Russia.; Laboratory for Biomolecular and Medical Technologies, Krasnoyarsk State Medical University, Krasnoyarsk, 660022, Russia., Volosnikova EA; State Research Center of Virology and Biotechnology VECTOR, Rospotrebnadzor, Koltsovo, 630559, Russia., Belenkaya SV; State Research Center of Virology and Biotechnology VECTOR, Rospotrebnadzor, Koltsovo, 630559, Russia., Esina TI; State Research Center of Virology and Biotechnology VECTOR, Rospotrebnadzor, Koltsovo, 630559, Russia., Isaeva AA; State Research Center of Virology and Biotechnology VECTOR, Rospotrebnadzor, Koltsovo, 630559, Russia., Nesmeyanova VS; State Research Center of Virology and Biotechnology VECTOR, Rospotrebnadzor, Koltsovo, 630559, Russia., Shanshin DV; State Research Center of Virology and Biotechnology VECTOR, Rospotrebnadzor, Koltsovo, 630559, Russia., Berlina AN; Laboratory of Immunobiochemistry, A.N. Bach Institute of Biochemistry, Research Center of Biotechnology of the Russian Academy of Sciences Moscow, Moscow, 119071, Russia., Komova NS; Laboratory of Immunobiochemistry, A.N. Bach Institute of Biochemistry, Research Center of Biotechnology of the Russian Academy of Sciences Moscow, Moscow, 119071, Russia., Svetlichnyi VA; Laboratory of Advanced Materials and Technology, Tomsk State University, Tomsk, 634050, Russia., Silnikov VN; Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, 630090, Russia., Shcherbakov DN; State Research Center of Virology and Biotechnology VECTOR, Rospotrebnadzor, Koltsovo, 630559, Russia.; Altai State University, Barnaul, 656049, Russia., Zamay GS; Laboratory for Digital Controlled Drugs and Theranostics, Federal Research Center KSC SB RAS, Krasnoyarsk, 660036, Russia.; Laboratory for Biomolecular and Medical Technologies, Krasnoyarsk State Medical University, Krasnoyarsk, 660022, Russia., Zamay SS; Department of Molecular Electronics, Federal Research Center KSC SB RAS, Krasnoyarsk, 660036, Russia., Smolyarova T; Laboratory for Digital Controlled Drugs and Theranostics, Federal Research Center KSC SB RAS, Krasnoyarsk, 660036, Russia.; School of Fundamental Biology and Biotechnology, Siberian Federal University, Krasnoyarsk, 660041, Russia., Tikhonova EP; Department of Infectious Diseases and Epidemiology, Krasnoyarsk State Medical University, Krasnoyarsk, 660022, Russia., Chen KH; Department of Applied Chemistry, National Pingtung University, Pingtung, 900391, Taiwan., Jeng US; National Synchrotron Radiation Research Center, Hsinchu Science Park, Hsinchu, 30076, Taiwan.; Department of Chemical Engineering, National Tsing Hua University, Hsinchu, 30013, Taiwan., Condorelli G; Department of Molecular Medicine and Medical Biotechnologies, University of Naples Federico II, Naples, 80131, Italy.; IRCCS Neuromed-Istituto Neurologico Mediterraneo Pozzilli, Via Atinense 18, 86077, Pozzilli, Italy., de Franciscis V; Institute of Genetic and Biomedical Research (IRGB), Research National Council (CNR), Milan, 09042, Italy., Groenhof G; Nanoscience Center and Department of Chemistry, University of Jyväskylä, Jyväskylä, 40014, Finland., Yang C; Department of Chemical Biology, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, 361005, P. R. China.; Institute of Molecular Medicine, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, 200127, P. R. China., Moskovsky AA; Department of Chemistry, Lomonosov Moscow State University, Moscow, 119991, Russia., Fedorov DG; Research Center for Computational Design of Advanced Functional Materials, National Institute of Advanced Industrial Science and Technology, Tsukuba, 305-8560, Japan., Tomilin FN; School of Non-Ferrous Metals and Materials Science, Siberian Federal University, Krasnoyarsk, 660041, Russia.; Laboratory of Physics of Magnetic Phenomena, Kirensky Institute of Physics, 660012, Krasnoyarsk, Russia., Tan W; Institute of Molecular Medicine, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, 200127, P. R. China.; College of Chemistry and Chemical Engineering, Hunan University, Changsha, 410082, P. R. China., Alexeev Y; Computational Science Division, Argonne National Laboratory, Lemont, IL, 60439, USA., Berezovski MV; Department of Chemistry and Biomolecular Sciences, Ottawa, Ontario, K1N6N5, Canada., Kichkailo AS; Laboratory for Digital Controlled Drugs and Theranostics, Federal Research Center KSC SB RAS, Krasnoyarsk, 660036, Russia.; Laboratory for Biomolecular and Medical Technologies, Krasnoyarsk State Medical University, Krasnoyarsk, 660022, Russia.

Publikováno v: Chemistry (Weinheim an der Bergstrasse, Germany) [Chemistry] 2022 Feb 24; Vol. 28 (12), pp. e202104481. Date of Electronic Publication: 2022 Feb 09.

Modeling negative ion defect migration through the gramicidin A channel.

Autor: Nemukhin AV; Department of Chemistry, M.V. Lomonosov Moscow State University, 1/3 Leninskie Gory, Moscow, 119992, Russian Federation. anem@lcc.chem.msu.ru, Kaliman IA, Moskovsky AA

Publikováno v: Journal of molecular modeling [J Mol Model] 2009 Aug; Vol. 15 (8), pp. 1009-12. Date of Electronic Publication: 2009 Feb 07.