Global research alliance in infectious disease: a collaborative effort to combat infectious diseases through dissemination of portable sequencing.

Autor: Runtuwene LR; Division 1, AIDS Research Center, National Institute of Infectious Diseases, Tokyo, Japan. luckyron@niid.go.jp.; Department of Computational Biology and Medical Science, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Japan. luckyron@niid.go.jp., Sathirapongsasuti N; Section of Translational Medicine, Faculty of Medicine, Ramathibodi Hospital, Mahidol University, Bangkok, Thailand., Srisawat R; Department of Medical Entomology, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand., Komalamisra N; Department of Medical Entomology, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand., Tuda JSB; Faculty of Medicine, Sam Ratulangi University, Manado, Indonesia., Mongan AE; Faculty of Medicine, Sam Ratulangi University, Manado, Indonesia., Aboge GO; Department of Public Health, Faculty of Veterinary Medicine, University of Nairobi, Nairobi, Kenya., Shabardina V; Institute of Evolutionary Biology, CSIC-Universitat Pompeu Fabra, Barcelona, Spain., Makalowski W; Institute of Bioinformatics, Faculty of Medicine, University of Muenster, Muenster, Germany., Nesti DR; Department of Bioresources Technology and Veterinary, Vocational College, Universitas Gadjah Mada, Yogyakarta, Indonesia., Artama WT; Department of Biochemistry, Faculty of Veterinary Medicine, Universitas Gadjah Mada, Yogyakarta, Indonesia., Nguyen-Thi LA; Center of Biomedical Research, National Institute of Hygiene and Epidemiology, Hanoi, Vietnam., Wan KL; Department of Biological Sciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, Kuala Lumpur, Malaysia., Na BK; Department of Parasitology and Tropical Medicine, College of Medicine, Gyeongsang National University, Jinju, South Korea., Hall W; Centre for Research in Infectious Diseases, University College Dublin, Dublin, Ireland., Pain A; Pathogen Genomics Laboratory, Biological and Environmental Sciences and Engineering (BESE) Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia.; Division of Collaboration and Education, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan., Eshita Y; Division of Collaboration and Education, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan., Maeda R; Division of Biomedical Science, Department of Basic Veterinary Medicine, Obihiro University of Agriculture and Veterinary, Obihiro, Japan., Yamagishi J; Division of Collaboration and Education, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan., Suzuki Y; Department of Computational Biology and Medical Science, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Japan.

Publikováno v: BMC research notes [BMC Res Notes] 2022 Feb 12; Vol. 15 (1), pp. 44. Date of Electronic Publication: 2022 Feb 12.

Portable sequencer in the fight against infectious disease.

Autor: Mongan AE; Faculty of Medicine, Sam Ratulangi University, Manado, Indonesia., Tuda JSB; Faculty of Medicine, Sam Ratulangi University, Manado, Indonesia., Runtuwene LR; Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Japan. luckyruntuwene@edu.k.u-tokyo.ac.jp.

Publikováno v: Journal of human genetics [J Hum Genet] 2020 Jan; Vol. 65 (1), pp. 35-40. Date of Electronic Publication: 2019 Oct 03.

Corrigendum: Interactive transcriptome analysis of malaria patients and infecting Plasmodium falciparum .

Autor: Yamagishi J, Natori A, Tolba MEM, Mongan AE, Sugimoto C, Katayama T, Kawashima S, Makalowski W, Maeda R, Eshita Y, Tuda J, Suzuki Y

Publikováno v: Genome research [Genome Res] 2018 Aug; Vol. 28 (8), pp. 1253.

Serotyping dengue virus with isothermal amplification and a portable sequencer.

Autor: Yamagishi J; Division of Collaboration and Education, Research Center for Zoonosis Control, Hokkaido University, North 20 West 10, Kita-ku, Sapporo, Hokkaido, 001-0020, Japan.; Global Station for Zoonosis Control, GI-CoRE, Hokkaido University, North 20 West 10, Kita-ku, Sapporo, Hokkaido, 001-0020, Japan., Runtuwene LR; Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8562, Japan., Hayashida K; Division of Collaboration and Education, Research Center for Zoonosis Control, Hokkaido University, North 20 West 10, Kita-ku, Sapporo, Hokkaido, 001-0020, Japan.; Oita University, Division of Laboratory Animal Science, Research Promotion Institute, 1-1 Idaigaoka, Hazamacho, Yufushi, Oita, 879-5593, Japan., Mongan AE; Department of Clinical Pathology, Sam Ratulangi University, Kampus Unsrat, Bahu Manado, 95115, Indonesia., Thi LAN; National Institute of Hygiene and Epidemiology, 1 Yersin, Hanoi, 112800, Vietnam., Thuy LN; National Institute of Hygiene and Epidemiology, 1 Yersin, Hanoi, 112800, Vietnam., Nhat CN; Preventive Medicine Center Hanoi, 70 Nguyen Chi Thanh Street, 117257, Hanoi, Vietnam., Limkittikul K; Department of Tropical Pediatrics, Faculty of Tropical Medicine, Mahidol University, Bangkok, 10300, Thailand., Sirivichayakul C; Department of Tropical Pediatrics, Faculty of Tropical Medicine, Mahidol University, Bangkok, 10300, Thailand., Sathirapongsasuti N; Graduate Program in Translational Medicine, Research Center, Faculty of Medicine Ramathibodi Hospital, Mahidol University, Bangkok, 10300, Thailand., Frith M; Computational Biology Research Center, National Institute of Advanced Industrial Science and Technology, Tokyo Waterfront Bio-IT Research Building, 2-4-7 Aomi, Koto-ku, Tokyo, 135-0064, Japan., Makalowski W; Faculty of Medicine, Institute of Bioinformatics, University of Münster, Niels-Stensen Strasse 14, Münster, 48149, Germany., Eshita Y; Department of Medical Entomology, Faculty of Tropical Medicine, Mahidol University, 420/6 Ratchawithi Road, Thung Phaya Thai, Ratchathewi, Bangkok, 10400, Thailand., Sugano S; Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8562, Japan., Suzuki Y; Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8562, Japan. ysuzuki@hgc.jp.

Publikováno v: Scientific reports [Sci Rep] 2017 Jun 14; Vol. 7 (1), pp. 3510. Date of Electronic Publication: 2017 Jun 14.

DB-AT: a 2015 update to the Full-parasites database brings a multitude of new transcriptomic data for apicomplexan parasites.

Autor: Jąkalski M; University of Münster, Faculty of Medicine, Institute of Bioinformatics, Niels-Stensen Strasse 14, 48149 Münster, Germany., Wakaguri H; Department of Medical Genome Science, Room 032, Sougou Research Complex, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8562, Japan., Kischka TG; University of Münster, Faculty of Medicine, Institute of Bioinformatics, Niels-Stensen Strasse 14, 48149 Münster, Germany., Nishikawa Y; National Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Obihiro, Hokkaido 080-8555, Japan., Kawazu S; National Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Obihiro, Hokkaido 080-8555, Japan., Matsubayashi M; National Institute of Animal Health, National Agricultural and Food Research Organization, Kannondai, Tsukuba, Ibaraki 305-0856, Japan., Kawahara F; Nippon Institute for Biological Science, 9-2221-1 Shin-machi, Ome, Tokyo 198-0024, Japan., Tsuji N; Department of Parasitology, Kitasato University School of Medicine, 1-15-1 Kitasato, Minami-ku, Sagamihara, Kanagawa 252-0374, Japan., Cao S; National Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Obihiro, Hokkaido 080-8555, Japan., Sunaga F; School of Veterinary Medicine, Azabu University, 1-17-71 Fucinobe, Chuo-ku, Sagamihara, Kanagawa 252-5201, Japan., Xuan X; National Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Obihiro, Hokkaido 080-8555, Japan., Okubo K; National Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Obihiro, Hokkaido 080-8555, Japan., Igarashi I; National Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Obihiro, Hokkaido 080-8555, Japan., Tuda J; Department of Medicine, Sam Ratulangi University, Kampus Unsrat, Bahu Manado, 95115, Indonesia., Mongan AE; Department of Medicine, Sam Ratulangi University, Kampus Unsrat, Bahu Manado, 95115, Indonesia., Eshita Y; Oita University, School of Medicine, 1-1 Idaigaoka, Hazamacho, Yufu, Oita 879-5593, Japan., Maeda R; Obihiro University of Agriculture and Veterinary Medicine, Inada-cho West 2-13, Obihiro, Hokkaido 080-8555, Japan., Makałowski W; University of Münster, Faculty of Medicine, Institute of Bioinformatics, Niels-Stensen Strasse 14, 48149 Münster, Germany., Suzuki Y; Department of Medical Genome Science, Room 032, Sougou Research Complex, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8562, Japan junya@czc.hokudai.ac.jp., Yamagishi J; Division of Collaboration and Education, Research Center for Zoonosis Control, Hokkaido University, North 20, West 10 Kita-ku, Sapporo, Hokkaido 001-0020, Japan Global Station for Zoonosis Control, GI-CoRE, Hokkaido University, North 20, West 10 Kita-ku, Sapporo, Hokkaido 001-0020, Japan junya@czc.hokudai.ac.jp.

Publikováno v: Nucleic acids research [Nucleic Acids Res] 2015 Jan; Vol. 43 (Database issue), pp. D631-6. Date of Electronic Publication: 2014 Nov 20.