DNA methylation dynamics during early plant life

Autor: Daniel Bouyer, Amira Kramdi, Mohamed Kassam, Maren Heese, Arp Schnittger, François Roudier, Vincent Colot

Publikováno v: Genome Biology, Vol 18, Iss 1, Pp 1-12 (2017)

Abstract Background Cytosine methylation is crucial for gene regulation and silencing of transposable elements in mammals and plants. While this epigenetic mark is extensively reprogrammed in the germline and early embryos of mammals, the extent to w

Externí odkaz: https://doaj.org/article/3712273eb44d4d23a501c4e15a357266

Oral Phage Therapy of Acute Bacterial Diarrhea With Two Coliphage Preparations: A Randomized Trial in Children From Bangladesh

Autor: Shafiqul Alam Sarker, Shamima Sultana, Gloria Reuteler, Deborah Moine, Patrick Descombes, Florence Charton, Gilles Bourdin, Shawna McCallin, Catherine Ngom-Bru, Tara Neville, Mahmuda Akter, Sayeeda Huq, Firdausi Qadri, Kaisar Talukdar, Mohamed Kassam, Michèle Delley, Chloe Loiseau, Ying Deng, Sahar El Aidy, Bernard Berger, Harald Brüssow

Publikováno v: EBioMedicine, Vol 4, Iss C, Pp 124-137 (2016)

Background: Antibiotic resistance is rising in important bacterial pathogens. Phage therapy (PT), the use of bacterial viruses infecting the pathogen in a species-specific way, is a potential alternative. Method: T4-like coliphages or a commercial Ru

Externí odkaz: https://doaj.org/article/960cb712c63848d09c8a1f8c7c6d8b04

Genome-wide negative feedback drives transgenerational DNA methylation dynamics in Arabidopsis.

Autor: Tasuku Ito, Yoshiaki Tarutani, Taiko Kim To, Mohamed Kassam, Evelyne Duvernois-Berthet, Sandra Cortijo, Kazuya Takashima, Hidetoshi Saze, Atsushi Toyoda, Asao Fujiyama, Vincent Colot, Tetsuji Kakutani

Publikováno v: PLoS Genetics, Vol 11, Iss 4, p e1005154 (2015)

Epigenetic variations of phenotypes, especially those associated with DNA methylation, are often inherited over multiple generations in plants. The active and inactive chromatin states are heritable and can be maintained or even be amplified by posit

Externí odkaz: https://doaj.org/article/9c5e91134b8d40ada56f02fb2c25ba05

Genome Sequence of Lactobacillus fermentum Strain NCC2970 (CNCM I-5068)

Autor: Gilles Faucherand, Alienor Genevaz, Pierre Sagory-Zalkind, Stéphane Duboux, Coralie Fournier, Pierre-Emmanuel Ciron, Deborah Moine, Caroline Barretto, Agnès Iltis, Mohamed Kassam, Catherine Ngom-Bru, Patrick Descombes

Publikováno v: Genome Announcements

Lactobacillus fermentum NCC2970 (CNCM I-5068) is a lactic acid bacterium originating from the Nestle Culture Collection. Here, we disclose its full 1.9-Gb genome sequence comprising one chromosome with no plasmid.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4a3d0ce22b361e0a0d6ca3b6fe3b6ac2
https://doi.org/10.1128/genomea.01254-16

DNA DAMAGE BINDING PROTEIN2 Shapes the DNA Methylation Landscape

Autor: Mohamed Kassam, Valérie Cognat, Fredy Barneche, Dimitri Heintz, Vincent Colot, Jean Molinier, Pascal Genschik, Amira Kramdi, Ikhlak Ahmed, Stéfanie Graindorge, Catherine Schalk, Marc Bergdoll, Stéphanie Drevensek, Chris Bowler, Nicolas Baumberger

Publikováno v: The Plant cell
The Plant cell, American Society of Plant Biologists (ASPB), 2016, 28 (9), pp.2043-2059. ⟨10.1105/tpc.16.00474⟩
The Plant cell, 2016, 28 (9), pp.2043-2059. ⟨10.1105/tpc.16.00474⟩
Plant Cell
Plant Cell, American Society of Plant Biologists, 2016, 28 (9), pp.2043-2059. ⟨10.1105/tpc.16.00474⟩

In eukaryotes, DNA repair pathways help to maintain genome integrity and epigenomic patterns. However, the factors at the nexus of DNA repair and chromatin modification/remodeling remain poorly characterized. Here, we uncover a previously unrecognize

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d041546e5057e9cbbb321ebff566b467
https://hal.archives-ouvertes.fr/hal-01601904