Rare Events and Conditional Events on Random Strings

Autor: Mireille Régnier, Alain Denise

Publikováno v: Discrete Mathematics & Theoretical Computer Science, Vol 6, Iss 2 (2004)

Some strings -the texts- are assumed to be randomly generated, according to a probability model that is either a Bernoulli model or a Markov model. A rare event is the over or under-representation of a word or a set of words. The aim of this paper is

Externí odkaz: https://doaj.org/article/337652cdbfd24a93bab2348bd84fb550

The characteristics of miRNA binding sites with mRNA of MYB plant transcription factors

Autor: Anatoliy Ivashchenko, Aizhan Rakhmetullina, Mireille Régnier

Publikováno v: International Journal of Biology and Chemistry. 12:60-67

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::ebfc01fb40ea902d1442d1d9f770920d
https://doi.org/10.26577/ijbch-2019-1-i14

Exponentially few RNA structures are designable

Autor: Hua-Ting Yao, Yann Ponty, Mireille Régnier, Cedric Chauve

Publikováno v: ACM-BCB 2019-10th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics
ACM-BCB 2019-10th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics, Sep 2019, Niagara-Falls, United States. pp.289-298, ⟨10.1145/3307339.3342163⟩
BCB

The problem of RNA design attempts to construct RNA sequences that perform a predefined biological function, identified by several additional constraints. One of the foremost objective of RNA design is that the designed RNA sequence should adopt a pr

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f30c5a8908d1ba5f4ed140c67e0351a2

Interactions of intergenic microRNAs with mRNAs of genes involved in carcinogenesis

Autor: Olga Berillo, Ivashchenko Anatoly, Assel S. Issabekova, Mireille Régnier

Publikováno v: Bioinformation
Bioinformation, Biomedical Informatics Publishing Group, 2012, 8 (11), pp.513-518. ⟨10.6026/97320630008513⟩
Bioinformation, 2012, 8 (11), pp.513-518. ⟨10.6026/97320630008513⟩

International audience; miRNAs regulate gene expression by binding with mRNAs of many genes. Studying their effects on genes involved in oncogenesis is important in cancer diagnostics and therapeutics. The RNAHybrid 2.1 program was used to predict th

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e30bb35ac037edbaf8deff29dd50cfb7
http://europepmc.org/articles/PMC3398775

miRAFinder and GeneAFinder scripts: large-scale searching for miRNA and related information in indexed literature abstracts

Autor: Olga Berillo, Anatoly Ivashchenko, Mireille Régnier

Publikováno v: Bioinformation

UNLABELLED In recent times, information on miRNAs and their binding sites is gaining momentum. Therefore, there is interest in the development of tools extracting miRNA related information from known literature. Hence, we describe GeneAFinder and miR

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4319bd326f30cf54a624f34cf65ebcf6
https://pubmed.ncbi.nlm.nih.gov/25258491