Zobrazeno 1 - 10
of 87
pro vyhledávání: '"Miranda De Graaf"'
Autor:
Ágnes Becsei, Alessandro Fuschi, Saria Otani, Ravi Kant, Ilja Weinstein, Patricia Alba, József Stéger, Dávid Visontai, Christian Brinch, Miranda de Graaf, Claudia M. E. Schapendonk, Antonio Battisti, Alessandra De Cesare, Chiara Oliveri, Fulvia Troja, Tarja Sironen, Olli Vapalahti, Frédérique Pasquali, Krisztián Bányai, Magdolna Makó, Péter Pollner, Alessandra Merlotti, Marion Koopmans, Istvan Csabai, Daniel Remondini, Frank M. Aarestrup, Patrick Munk
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-13 (2024)
Abstract Sewage metagenomics has risen to prominence in urban population surveillance of pathogens and antimicrobial resistance (AMR). Unknown species with similarity to known genomes cause database bias in reference-based metagenomics. To improve su
Externí odkaz:
https://doaj.org/article/74e53418d5e24d359d1952aad059b075
Autor:
Lihong Liu, Mikhayil Hakhverdyan, Per Wallgren, Kevin Vanneste, Qiang Fu, Pierrick Lucas, Yannick Blanchard, Miranda de Graaf, Bas B. Oude Munnink, Sander van Boheemen, Alex Bossers, Marcel Hulst, Steven Van Borm
Publikováno v:
Microbiology Spectrum, Vol 12, Iss 10 (2024)
ABSTRACT Metagenomic shotgun sequencing (mNGS) can serve as a generic molecular diagnostic tool. An mNGS proficiency test (PT) was performed in six European veterinary and public health laboratories to detect porcine astroviruses in fecal material an
Externí odkaz:
https://doaj.org/article/85ab2aedbd3d4a69bfd383f3011d3e83
Autor:
Ágnes Becsei, Alessandro Fuschi, Saria Otani, Ravi Kant, Ilja Weinstein, Patricia Alba, József Stéger, Dávid Visontai, Christian Brinch, Miranda de Graaf, Claudia M. E. Schapendonk, Antonio Battisti, Alessandra De Cesare, Chiara Oliveri, Fulvia Troja, Tarja Sironen, Olli Vapalahti, Frédérique Pasquali, Krisztián Bányai, Magdolna Makó, Péter Pollner, Alessandra Merlotti, Marion Koopmans, Istvan Csabai, Daniel Remondini, Frank M. Aarestrup, Patrick Munk
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-1 (2024)
Externí odkaz:
https://doaj.org/article/8b2809bf1eaa4b9683f6410d3982d0c3
Autor:
Dennis Schmitz, Florian Zwagemaker, Bas van der Veer, Harry Vennema, Jeroen F. J. Laros, Marion P. G. Koopmans, Miranda De Graaf, Annelies Kroneman
Publikováno v:
Microbiology Spectrum, Vol 11, Iss 4 (2023)
ABSTRACT Norovirus is the primary cause of viral gastroenteritis (GE). To investigate norovirus epidemiology, there is a need for whole-genome sequencing and reference sets consisting of complete genomes. To investigate the potential of shotgun metag
Externí odkaz:
https://doaj.org/article/9f66c72b56924902901eddf0edae474e
Autor:
Nele Villabruna, Ray W. Izquierdo-Lara, Claudia M. E. Schapendonk, Erwin de Bruin, Felicity Chandler, Tran Thi Nhu Thao, Brenda M. Westerhuis, Janko van Beek, Louise Sigfrid, Carlo Giaquinto, Herman Goossens, Julia A. Bielicki, Malte Kohns Vasconcelos, Pieter L. A. Fraaij, Marion P. G. Koopmans, Miranda de Graaf
Publikováno v:
Scientific Reports, Vol 12, Iss 1, Pp 1-14 (2022)
Abstract Norovirus is a leading cause of epidemic acute gastroenteritis. More than 30 genotypes circulate in humans, some are common, and others are only sporadically detected. Here, we investigated whether serology can be used to determine which gen
Externí odkaz:
https://doaj.org/article/c58d7de5c68447838248565890cd94ff
Autor:
Ray Izquierdo-Lara, Goffe Elsinga, Leo Heijnen, Bas B. Oude Munnink, Claudia M.E. Schapendonk, David Nieuwenhuijse, Matthijs Kon, Lu Lu, Frank M. Aarestrup, Samantha Lycett, Gertjan Medema, Marion P.G. Koopmans, Miranda de Graaf
Publikováno v:
Emerging Infectious Diseases, Vol 27, Iss 5, Pp 1405-1415 (2021)
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has rapidly become a major global health problem, and public health surveillance is crucial to monitor and prevent virus spread. Wastewater-based epidemiology has been proposed as an additi
Externí odkaz:
https://doaj.org/article/0a38e45746314d22ae7112af8eeb187f
Autor:
Martin Chi-Wai Chan, Sunando Roy, Joseph Bonifacio, Lin-Yao Zhang, Preeti Chhabra, Jenny C.M. Chan, Cristina Celma, Mary Ann Igoy, Sin-Leung Lau, Kirran N. Mohammad, Jan Vinjé, Harry Vennema, Judith Breuer, Marion Koopmans, Miranda de Graaf
Publikováno v:
Emerging Infectious Diseases, Vol 27, Iss 1, Pp 289-293 (2021)
We report a new norovirus GII.4 variant, GII.4 Hong Kong, with low-level circulation in 4 Eurasia countries since mid-2017. Amino acid substitutions in key residues on the virus capsid associated with the emergence of pandemic noroviruses suggest tha
Externí odkaz:
https://doaj.org/article/a33b6e620fc34e4fbe9f2415a77dc12e
Autor:
Marion Desdouits, Miranda de Graaf, Sofia Strubbia, Bas B. Oude Munnink, Annelies Kroneman, Françoise S. Le Guyader, Marion P. G. Koopmans
Publikováno v:
One Health Outlook, Vol 2, Iss 1, Pp 1-8 (2020)
Abstract Foodborne viral infections rank among the top 5 causes of disease, with noroviruses and hepatitis A causing the greatest burden globally. Contamination of foods by infected food handlers or through environmental pollution are the main source
Externí odkaz:
https://doaj.org/article/d8785db4167a4b4b9c4f85999016b981
Autor:
Janko van Beek, Gwen Teesing, Bas B Oude Munnink, Abraham Meima, Henrike J Vriend, Jessica Elzakkers, Miranda de Graaf, Jeroen Langeveld, Gert-Jan Medema, Richard Molenkamp, Helene Voeten, Ewout Fanoy, Marion Koopmans, Outbreak investigation and national genomic surveillance teams
Publikováno v:
PLoS ONE, Vol 17, Iss 10, p e0276696 (2022)
An outbreak of SARS-CoV-2 Alpha variant (Pango lineage B.1.1.7) was detected at a primary school (School X) in Lansingerland, the Netherlands, in December 2020. The outbreak was studied retrospectively, and population-based screening was used to asse
Externí odkaz:
https://doaj.org/article/14eba681b4c54c59aa379444665f3084
Autor:
Michèle M. Molendijk, My V. T. Phan, Lonneke G. M. Bode, Nikolas Strepis, Divyae K. Prasad, Nathalie Worp, David F. Nieuwenhuijse, Claudia M. E. Schapendonk, Bouke K. H. L. Boekema, Annelies Verbon, Marion P. G. Koopmans, Miranda de Graaf, Willem J. B. van Wamel
Publikováno v:
Viruses, Vol 15, Iss 1, p 14 (2022)
Infections involving antibiotic resistant Staphylococcus aureus (S. aureus) represent a major challenge to successful treatment. Further, although bacteriophages (phages) could be an alternative to antibiotics, there exists a lack of correlation in p
Externí odkaz:
https://doaj.org/article/f0abf75a322c4c72a495fdccdfe817da