Specimen and sample metadata standards for biodiversity genomics: a proposal from the Darwin Tree of Life project

Autor: Lawniczak, Mara KN, Davey, Robert, Rajan, Jeena, Pereira-da-Conceicoa, Lyndall, Kilias, Estelle, Hollingsworth, Peter, Barnes, Ian, Allen, Heather, Blaxter, Mark, Burgin, Josephine, Broad, Gavin, Crowley, Liam, Gaya, Ester, Holroyd, Nancy, Lewis, Owen, McTaggart, Seanna, Mieszkowska, Nova, Minotto, Alice, Shaw, Felix, Richards, Thomas, Sivess, Laura AS, Darwin Tree of Life Consortium

The vision of the Earth BioGenome Project1 is to complete reference genomes for all of the planet’s ~2M described eukaryotic species in the coming decade. To contribute to this global endeavour, the Darwin Tree of Life Project (DToL2) was launched

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http://livrepository.liverpool.ac.uk/3160430/1/Lawniczak_et_al_Wellcome_Open_Research_22_DToL_SWG.pdf

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Author Correction: The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics.

Autor: Mc Cartney AM; Genomics Institute, University of California, Santa Cruz, CA, USA. anmmccar@ucsc.edu., Formenti G; The Vertebrate Genome Laboratory, The Rockefeller University, New York, NY, USA.; Department of Biology, University of Florence, Sesto Fiorentino, Italy., Mouton A; Department of Biology, University of Florence, Sesto Fiorentino, Italy.; InBios-Conservation Genetics Laboratory, University of Liege, Liege, Belgium., De Panis D; Leibniz Institut für Zoo und Wildtierforschung, Berlin, Germany.; Berlin Center for Genomics in Biodiversity Research, Berlin, Germany., Marins LS; Leibniz Institut für Zoo und Wildtierforschung, Berlin, Germany.; Berlin Center for Genomics in Biodiversity Research, Berlin, Germany., Leitão HG; Department of Biology, University of Antwerp, Antwerp, Belgium., Diedericks G; Department of Biology, University of Antwerp, Antwerp, Belgium., Kirangwa J; Institute of Zoology, University of Cologne, Cologne, Germany., Morselli M; Department of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma, Italy., Salces-Ortiz J; Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), Barcelona, Spain., Escudero N; Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), Barcelona, Spain., Iannucci A; Department of Biology, University of Florence, Sesto Fiorentino, Italy., Natali C; Department of Biology, University of Florence, Sesto Fiorentino, Italy., Svardal H; Department of Biology, University of Antwerp, Antwerp, Belgium.; Naturalis Biodiversity Center, Leiden, The Netherlands., Fernández R; Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), Barcelona, Spain., De Pooter T; Neuromics Support Facility, VIB Center for Molecular Neurology, VIB, Antwerp, Belgium.; Neuromics Support Facility, Department of Biomedical Sciences, University of Antwerp, Antwerp, Belgium., Joris G; Neuromics Support Facility, VIB Center for Molecular Neurology, VIB, Antwerp, Belgium.; Neuromics Support Facility, Department of Biomedical Sciences, University of Antwerp, Antwerp, Belgium., Strazisar M; Neuromics Support Facility, VIB Center for Molecular Neurology, VIB, Antwerp, Belgium.; Neuromics Support Facility, Department of Biomedical Sciences, University of Antwerp, Antwerp, Belgium., Wood JMD; Tree of Life, Wellcome Sanger Institute, Hinxton, Cambridge, UK., Herron KE; School of Biology and Environmental Science, University College Dublin, Belfield, Ireland., Seehausen O; Aquatic Ecology & Evolution, Institute of Ecology & Evolution, University of Bern, Bern, Switzerland.; Department of Fish Ecology & Evolution, Eawag, Kastanienbaum, Switzerland., Watts PC; Department of Biological and Environmental Science, University of Jyvaskyla, Jyvaskyla, Finland., Shaw F; The Earlham Institute, Norwich Research Park, Norwich, UK., Davey RP; The Earlham Institute, Norwich Research Park, Norwich, UK., Minotto A; Digital Science, London, UK., Fernández JM; Barcelona Supercomputing Center; Spanish National Bioinformatics Institute, ELIXIR Spain, Getafe, Spain., Böhne A; Leibniz Institute for the Analysis of Biodiversity Change, Museum Koenig Bonn, Bonn, Germany., Alegria C; CE3C-Centre for Ecology, Evolution and Environmental Changes & CHANGE-Global Change and Sustainability Institute, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Lisboa, Portugal., Alioto T; Centro Nacional de Análisis Genómico (CNAG), Barcelona, Spain.; Universitat de Barcelona (UB), Barcelona, Spain., Alves PC; CIBIO, Centro de Investigacao em Biodiversidade e Recursos Geneticos, InBIO Laboratorio Associado, Universidade do Porto, Vairao, Portugal.; Departamento de Biologia, Faculdade de Ciencias, Universidade do Porto, Porto, Portugal.; BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairao, Vairao, Portugal., Amorim IR; University of the Azores, cE3c-Centre for Ecology, Evolution and Environmental Changes, Azorean Biodiversity Group, CHANGE-Global Change and Sustainability Institute, Rua Capitão João d´Ávila, Pico da Urze, Angra do Heroísmo, Portugal., Aury JM; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, France., Backstrom N; Evolutionary Biology Program, Department of Ecology and Genetics, Uppsala University, Uppsala, Sweden., Baldrian P; Institute of Microbiology of the Czech Academy of Sciences, Praha, Czech Republic., Baltrunaite L; Nature Research Centre, Debrecen, Hungary., Barta E; Institute of Biochemistry and Molecular Biology, Faculty of Medicine, University of Debrecen, Debrecen, Hungary., BedHom B; Institut de Systematique, Evolution, Biodiversite, Museum National d Histoire Naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, Paris, France., Belser C; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, France., Bergsten J; Department of Zoology, Swedish Museum of Natural History, Stockholm, Sweden.; Department of Zoology, Faculty of Science, Stockholm University, Stockholm, Sweden., Bertrand L; Genoscope, Institut François Jacob, CEA, Université Paris-Saclay, Evry, France., Bilandija H; Ruder Boskovic Institute, Zagreb, Croatia., Binzer-Panchal M; SciLifeLab, Solna, Sweden.; Uppsala University, Uppsala, Sweden.; National Bioinformatics Infrastructure Sweden, Uppsala, Sweden., Bista I; Senckenberg Research Institute, Frankfurt, Germany.; LOEWE Centre for Translational Biodiversity Genomics, Frankfurt, Germany.; Wellcome CRUK Gurdon Institute, University of Cambridge, Cambridge, UK., Blaxter M; Tree of Life, Wellcome Sanger Institute, Hinxton, Cambridge, UK., Borges PAV; University of the Azores, cE3c-Centre for Ecology, Evolution and Environmental Changes, Azorean Biodiversity Group, CHANGE-Global Change and Sustainability Institute, Rua Capitão João d´Ávila, Pico da Urze, Angra do Heroísmo, Portugal., Dias GB; SciLifeLab, Solna, Sweden.; Uppsala University, Uppsala, Sweden.; National Bioinformatics Infrastructure Sweden, Uppsala, Sweden., Bosse M; VU University Amsterdam, Amsterdam, The Netherlands.; Animal Breeding & Genomics, Wageningen University & Research, Wageningen, The Netherlands.; Wageningen University & Research, Wageningen, The Netherlands., Brown T; Leibniz Institut für Zoo und Wildtierforschung, Berlin, Germany.; Berlin Center for Genomics in Biodiversity Research, Berlin, Germany.; Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.; DRESDEN concept Genome Center, Dresden, Germany., Bruggmann R; Interfaculty Bioinformatics Unit and Swiss Institute of Bioinformatics, University of Bern, Bern, Switzerland., Buena-Atienza E; Institute of Medical Genetics and Applied Genomics, University of Tubingen, Tubingen, Germany.; NGS Competence Center Tubingen, Tubingen, Germany., Burgin J; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK., Buzan E; University of Primorska, Faculty of Mathematics, Natural Sciences and Information Technologies, Koper, Slovenia.; Faculty of Environmental Protection, Velenje, Slovenia., Cariani A; Department of Biological, Geological and Environmental Sciences, Alma Mater Studiorum Universitá di Bologna, Bologna, Italy., Casadei N; Institute of Medical Genetics and Applied Genomics, University of Tubingen, Tubingen, Germany.; NGS Competence Center Tubingen, Tubingen, Germany., Chiara M; Department of Biosciences, Università degli Studi di Milano, Milan, Italy.; Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, Consiglio Nazionale delle Ricerche, Bari, Italy., Chozas S; CE3C-Centre for Ecology, Evolution and Environmental Changes & CHANGE-Global Change and Sustainability Institute, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Lisboa, Portugal.; Sociedade Portuguesa de Botânica, Lisbon, Portugal., Čiampor F Jr; Department of Biodiversity and Ecology, Plant Science and Biodiversity Centre Slovak Academy of Sciences, Bratislava, Slovakia., Crottini A; CIBIO, Centro de Investigacao em Biodiversidade e Recursos Geneticos, InBIO Laboratorio Associado, Universidade do Porto, Vairao, Portugal.; Departamento de Biologia, Faculdade de Ciencias, Universidade do Porto, Porto, Portugal.; BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairao, Vairao, Portugal., Cruaud C; Genoscope, Institut François Jacob, CEA, Université Paris-Saclay, Evry, France., Cruz F; Centro Nacional de Análisis Genómico (CNAG), Barcelona, Spain.; Universitat de Barcelona (UB), Barcelona, Spain., Dalen L; Department of Zoology, Stockholm University, Stockholm, Sweden.; Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden.; Centre for Palaeogenetics, Stockholm, Sweden., De Biase A; Department of Biology and Biotechnologies, Sapienza University of Rome, Rome, Italy., Del Campo J; Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), Barcelona, Spain., Delic T; University of Ljubljana, Biotechnical Faculty, Department of Biology, Ljubljana, Slovenia., Dennis AB; University of Namur, Department of Biology, URBE, ILEE, Namur, Belgium., Derks MFL; Animal Breeding & Genomics, Wageningen University & Research, Wageningen, The Netherlands., Diroma MA; Department of Biology, University of Florence, Sesto Fiorentino, Italy., Djan M; Department of Biology and Ecology, University of Novi Sad, Novi Sad, Serbia., Duprat S; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, France., Eleftheriadi K; Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), Barcelona, Spain., Feulner PGD; Eawag Swiss Federal Institute of Aquatic Science and Technology, Department of Fish Ecology & Evolution, Kastanienbaum, Switzerland., Flot JF; Department of Organismal Biology, Universite libre de Bruxelles, Brussels, Belgium., Forni G; Department of Biological, Geological and Environmental Sciences, Alma Mater Studiorum Universitá di Bologna, Bologna, Italy., Fosso B; Department of Biosciences, Biotechnology and Environment, University of Bari Aldo Moro, Bari, Italy., Fournier P; Groupe de Recherche et d Etude pour la Gestion de l Environnement, Villandraut, France., Fournier-Chambrillon C; Groupe de Recherche et d Etude pour la Gestion de l Environnement, Villandraut, France., Gabaldon T; Barcelona Supercomputing Centre (BSC), Barcelona, Spain.; Institute for Research in Biomedicine (IRB), Barcelona, Spain.; Catalan Institution for Research and Advanced Studies (ICREA), Barcelona, Spain.; CIBERINFEC, Instituto Carlos III, Barcelona, Spain., Garg S; NNF Center for Biosustainability, Technical University of Denmark, Kongens Lyngby, Denmark., Gissi C; Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, Consiglio Nazionale delle Ricerche, Bari, Italy.; Department of Biosciences, Biotechnology and Environment, University of Bari Aldo Moro, Bari, Italy.; CoNISMa, Consorzio Nazionale Interuniversitario per le Scienze del Mare, Roma, Italy., Giupponi L; Centre of Applied Studies for the Sustainable Management and Protection of Mountain Areas CRC Ge.S.Di.Mont., University of Milan, Milan, Italy.; Department of Agricultural and Environmental Sciences-Production, Landscape and Agroenergy DiSAA, University of Milan, Milan, Italy., Gomez-Garrido J; Centro Nacional de Análisis Genómico (CNAG), Barcelona, Spain.; Universitat de Barcelona (UB), Barcelona, Spain., González J; Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), Barcelona, Spain., Grilo ML; Marine and Environmental Sciences Centre, Aquatic Research Network, Instituto Universitário de Ciências Psicológicas, Sociais e da Vida, Lisboa, Portugal.; Egas Moniz Center for Interdisciplinary Research (CiiEM), Egas Moniz School of Health & Science, Caparica, Portugal., Grüning B; Bioinformatics Group, Department of Computer Science, Albert-Ludwigs-University Freiburg, Freiburg, Germany., Guerin T; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, France., Guiglielmoni N; University of Cologne, Cologne, Germany., Gut M; Centro Nacional de Análisis Genómico (CNAG), Barcelona, Spain.; Universitat de Barcelona (UB), Barcelona, Spain., Haesler MP; Aquatic Ecology & Evolution, Institute of Ecology & Evolution, University of Bern, Bern, Switzerland.; Department of Fish Ecology & Evolution, Eawag, Kastanienbaum, Switzerland., Hahn C; Department of Biology, University of Graz, Graz, Austria., Halpern B; MME BirdLife Hungary, Budapest, Hungary.; Doctoral School of Biology, Department of Systematic Zoology and Ecology, Institute of Biology, ELTE Eotvos Lorand University, Budapest, Hungary.; HUN-REN-ELTE-MTM Integrative Ecology Research Group, Budapest, Hungary., Harrison PW; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK., Heintz J; SciLifeLab, Solna, Sweden.; Uppsala University, Uppsala, Sweden.; National Bioinformatics Infrastructure Sweden, Uppsala, Sweden., Hindrikson M; Department of Zoology, Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia., Höglund J; Institute of Life and Environmental Sciences, University of Iceland, Reykjavik, Iceland., Howe K; Tree of Life, Wellcome Sanger Institute, Hinxton, Cambridge, UK., Hughes GM; School of Biology and Environmental Science, University College Dublin, Belfield, Ireland.; UCD Conway Institute, University College Dublin, Belfield, Ireland., Istace B; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, France., Cock MJ; Algal Genetics Group, UMR 8227, CNRS, Sorbonne Universite, UPMC University Paris 06, Paris, France.; France Integrative Biology of Marine Models, Station Biologique de Roscoff, Roscoff, France., Janžekovič F; University of Maribor, Faculty of Natural Sciences and Mathematics, Maribor, Slovenia., Jonsson ZO; Institute of Life and Environmental Sciences, University of Iceland, Reykjavik, Iceland., Joye-Dind S; Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Koskimäki JJ; Ecology and Genetics Research Unit, University of Oulu, Oulu, Finland., Krystufek B; Slovenian Museum of Natural History, Ljubljana, Slovenia.; Science and Research Centre Koper, Koper, Slovenia., Kubacka J; Museum and Institute of Zoology, Polish Academy of Sciences, Warsaw, Poland., Kuhl H; Department IV Fish Biology, Fisheries and Aquaculture, Leibniz Institute of Freshwater Ecology and Inland Fisheries, Berlin, Germany., Kusza S; University of Debrecen, Centre for Agricultural Genomics and Biotechnology, Debrecen, Hungary., Labadie K; Genoscope, Institut François Jacob, CEA, Université Paris-Saclay, Evry, France., Lähteenaro M; Department of Zoology, Swedish Museum of Natural History, Stockholm, Sweden.; Department of Zoology, Faculty of Science, Stockholm University, Stockholm, Sweden., Lantz H; SciLifeLab, Solna, Sweden.; Uppsala University, Uppsala, Sweden.; National Bioinformatics Infrastructure Sweden, Uppsala, Sweden., Lavrinienko A; Laboratory of Food Systems Biotechnology, Institute of Food, Nutrition, and Health, ETH Zurich, Zurich, Switzerland., Leclère L; Sorbonne Université, CNRS, Biologie Intégrative des Organismes Marins (BIOM), Banyuls-sur-Mer, France., Lopes RJ; CE3C-Centre for Ecology, Evolution and Environmental Changes & CHANGE-Global Change and Sustainability Institute, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Lisboa, Portugal.; MHNC-UP, Natural History and Science Museum of the University of Porto, Porto, Portugal., Madsen O; Animal Breeding & Genomics, Wageningen University & Research, Wageningen, The Netherlands., Magdelenat G; Genoscope, Institut François Jacob, CEA, Université Paris-Saclay, Evry, France., Magoga G; Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy., Manousaki T; Hellenic Centre for Marine Research (HCMR), Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC), Heraklion, Crete, Greece., Mappes T; Department of Biological and Environmental Science, University of Jyvaskyla, Jyvaskyla, Finland., Marques JP; CIBIO, Centro de Investigacao em Biodiversidade e Recursos Geneticos, InBIO Laboratorio Associado, Universidade do Porto, Vairao, Portugal.; BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairao, Vairao, Portugal., Redondo GIM; Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), Barcelona, Spain., Maumus F; Universite Paris Saclay, INRAE, URGI, Versailles, France., McCarthy SA; Department of Genetics, University of Cambridge, Cambridge, UK.; Wellcome Sanger Institute, Cambridge, UK., Megens HJ; Animal Breeding & Genomics, Wageningen University & Research, Wageningen, The Netherlands., Melo-Ferreira J; CIBIO, Centro de Investigacao em Biodiversidade e Recursos Geneticos, InBIO Laboratorio Associado, Universidade do Porto, Vairao, Portugal.; BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairao, Vairao, Portugal.; Departamento de Biologia, Faculdade de Ciencias da Universidade do Porto, Porto, Portugal., Mendes SL; CE3C-Centre for Ecology, Evolution and Environmental Changes & CHANGE-Global Change and Sustainability Institute, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Lisboa, Portugal., Montagna M; Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy.; Interuniversity Center for Studies on Bioinspired Agro Environmental Technology, University of Naples Federico II, Naples, Italy., Moreno J; CE3C-Centre for Ecology, Evolution and Environmental Changes & CHANGE-Global Change and Sustainability Institute, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Lisboa, Portugal.; MARE Marine and Environmental Sciences Centre, ARNET Aquatic Research Network, Lisboa, Portugal., Mosbech MB; SciLifeLab, Solna, Sweden.; Uppsala University, Uppsala, Sweden.; National Bioinformatics Infrastructure Sweden, Uppsala, Sweden., Moura M; CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Pólo dos Açores; Faculdade de Ciências e Tecnologia, Universidade dos Açores, Ponta Delgada, Portugal.; UNESCO, Chair Land Within Sea Biodiversity & Sustainability in Atlantic Islands, Portugal., Musilova Z; Department of Zoology, Faculty of Science, Charles University, Prague, Czech Republic., Myers E; Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.; DRESDEN concept Genome Center, Dresden, Germany., Nash WJ; The Earlham Institute, Norwich Research Park, Norwich, UK., Nater A; Interfaculty Bioinformatics Unit and Swiss Institute of Bioinformatics, University of Bern, Bern, Switzerland., Nicholson P; Next Generation Sequencing Platform, University of Bern, Bern, Switzerland., Niell M; Andorra Research and Innovation, Sant Julià de Lòria, Andorra., Nijland R; Marine Animal Ecology Group, Wageningen University and Research, Wageningen, The Netherlands., Noel B; University of the Azores, cE3c-Centre for Ecology, Evolution and Environmental Changes, Azorean Biodiversity Group, CHANGE-Global Change and Sustainability Institute, Rua Capitão João d´Ávila, Pico da Urze, Angra do Heroísmo, Portugal., Noren K; Department of Zoology, Stockholm University, Stockholm, Sweden., Oliveira PH; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, France., Olsen RA; Science for Life Laboratory, Department of Biochemistry and Biophysics, Stockholm University, Solna, Sweden., Ometto L; Department of Biology and Biotechnology, University of Pavia, Pavia, Italy.; National Biodiversity Future Center, Palermo, Italy., Oomen RA; Centre for Ecological and Evolutionary Synthesis, University of Oslo, Oslo, Norway.; University of New Brunswick Saint John, Saint John, New Brunswick, Canada., Ossowski S; Institute for Medical Genetics and Applied Genomics, University of Tubingen, Tubingen, Germany.; NGS Competence Center Tubingen (NCCT), University of Tubingen, Tubingen, Germany.; Institute for Bioinformatics and Medical Informatics (IBMI), University of Tubingen, Tubingen, Germany., Palinauskas V; Nature Research Centre, Vilnius, Lithuania., Palsson S; Institute of Life and Environmental Sciences, University of Iceland, Reykjavik, Iceland., Panibe JP; Biodiversity Research Center, Academia Sinica, Taipei, Taiwan., Pauperio J; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK., Pavlek M; Ruder Boskovic Institute, Zagreb, Croatia., Payen E; Genoscope, Institut François Jacob, CEA, Université Paris-Saclay, Evry, France., Pawlowska J; Faculty of Biology, University of Warsaw, Warsaw, Poland., Pellicer J; Institut Botànic de Barcelona, IBB (CSIC-CMCNB), Passeig del Migdia s.n., Parc de Montjüic, Barcelona, Spain., Pesole G; University of Bari Aldo Moro, Department of Biosciences, Biotechnology and Environment; Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, Consiglio Nazionale delle Ricerche, Bari, Italy., Pimenta J; CIBIO, Centro de Investigacao em Biodiversidade e Recursos Geneticos, InBIO Laboratorio Associado, Universidade do Porto, Vairao, Portugal.; Wellcome Sanger Institute, Cambridge, UK., Pippel M; SciLifeLab, Solna, Sweden.; Uppsala University, Uppsala, Sweden.; National Bioinformatics Infrastructure Sweden, Uppsala, Sweden., Pirttilä AM; Ecology and Genetics Research Unit, University of Oulu, Oulu, Finland., Poulakakis N; Department of Biology, School of Sciences and Engineering, University of Crete, Voutes University Campus, Irakleio, Greece.; Natural History Museum of Crete, School of Sciences and Engineering, University of Crete, Irakleio, Greece., Rajan J; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK., M C Rego R; CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Pólo dos Açores; Faculdade de Ciências e Tecnologia, Universidade dos Açores, Ponta Delgada, Portugal.; UNESCO, Chair Land Within Sea Biodiversity & Sustainability in Atlantic Islands, Portugal., Resendes R; Universidade dos Acores, Departamento de Biologia, Ponta Delgada, Portugal., Resl P; Department of Biology, University of Graz, Graz, Austria., Riesgo A; Department of Biodiversity and Evolutionary Biology, Museo Nacional de Ciencias Naturales, Madrid, Spain., Rodin-Morch P; Department of Ecology and Genetics, Uppsala University, Uppsala, Sweden., Soares AER; SciLifeLab, Solna, Sweden.; Uppsala University, Uppsala, Sweden.; National Bioinformatics Infrastructure Sweden, Uppsala, Sweden., Fernandes CR; CE3C-Centre for Ecology, Evolution and Environmental Changes & CHANGE-Global Change and Sustainability Institute, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Lisboa, Portugal.; Faculdade de Psicologia, Universidade de Lisboa, Lisboa, Portugal., Romeiras MM; CE3C-Centre for Ecology, Evolution and Environmental Changes & CHANGE-Global Change and Sustainability Institute, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Lisboa, Portugal.; Linking Landscape, Environment, Agriculture and Food, Associated Laboratory TERRA, Instituto Superior de Agronomia, Universidade de Lisboa, Lisboa, Portugal.; Portugal Centre for Ecology, Evolution and Environmental Changes, Lisbon, Portugal., Roxo G; CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Pólo dos Açores; Faculdade de Ciências e Tecnologia, Universidade dos Açores, Ponta Delgada, Portugal.; UNESCO, Chair Land Within Sea Biodiversity & Sustainability in Atlantic Islands, Portugal., Rüber L; Aquatic Ecology & Evolution, Institute of Ecology & Evolution, University of Bern, Bern, Switzerland.; Naturhistorisches Museum Bern, Bern, Switzerland., Ruiz-Lopez MJ; Departamento de Biología de la Conservación y Cambio Global, Estación Biológica de Doñana (EBD), CSIC, Sevilla, Spain.; CIBER of Epidemiology and Public Health, Granada, Spain., Saarma U; Department of Zoology, Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia., da Silva LP; CIBIO, Centro de Investigacao em Biodiversidade e Recursos Geneticos, InBIO Laboratorio Associado, Universidade do Porto, Vairao, Portugal.; BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairao, Vairao, Portugal., Sim-Sim M; CE3C-Centre for Ecology, Evolution and Environmental Changes & CHANGE-Global Change and Sustainability Institute, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Lisboa, Portugal.; Museu Nacional de História Natural e da Ciência, Lisboa, Portugal.; Departamento de Biologia Vegetal, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal., Soler L; SciLifeLab, Solna, Sweden.; Uppsala University, Uppsala, Sweden.; National Bioinformatics Infrastructure Sweden, Uppsala, Sweden., Sousa VC; CE3C-Centre for Ecology, Evolution and Environmental Changes & CHANGE-Global Change and Sustainability Institute, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Lisboa, Portugal.; Departamento de Biologia Animal, Faculdade de Ciências da Universidade de Lisboa, Lisboa, Portugal., Santos CS; MARE Marine and Environmental Sciences Centre, ARNET Aquatic Research Network, Lisboa, Portugal., Spada A; Department of Agricultural and Environmental Sciences Production, Landscape, Agroenergy, University of Milan, Milan, Italy., Stefanovic M; Department of Biology and Ecology, University of Novi Sad, Novi Sad, Serbia., Steger V; Department of Genetics and Genomics, Institute of Genetics and Biotechnology, Hungarian University of Agriculture and Life Sciences, Godollo, Hungary., Stiller J; Section for Ecology and Evolution, Department of Biology, University of Copenhagen, Copenhagen, Denmark., Stöck M; Department IV Fish Biology, Fisheries and Aquaculture, Leibniz Institute of Freshwater Ecology and Inland Fisheries, Berlin, Germany., Struck TH; Natural History Museum, University of Oslo, Blindern, Oslo, Norway., Sudasinghe H; Naturhistorisches Museum Bern, Bern, Switzerland.; Division of Evolutionary Ecology, Institute of Ecology and Evolution, University of Bern, Bern, Switzerland., Tapanainen R; University of Eastern Finland, Kuopio, Finland., Tellgren-Roth C; SciLifeLab, Solna, Sweden.; Uppsala University, Uppsala, Sweden.; National Bioinformatics Infrastructure Sweden, Uppsala, Sweden., Trindade H; CE3C-Centre for Ecology, Evolution and Environmental Changes & CHANGE-Global Change and Sustainability Institute, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Lisboa, Portugal.; Departamento de Biologia Vegetal, Faculdade de Ciências, Universidade de Lisboa, Lisboa, Portugal., Tukalenko Y; Institute for Nuclear Research of the NAS of Ukraine, Kyiv, Ukraine., Urso I; Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies, Consiglio Nazionale delle Ricerche, Bari, Italy., Vacherie B; Genoscope, Institut François Jacob, CEA, Université Paris-Saclay, Evry, France., Van Belleghem SM; Ecology, Evolution and Conservation Biology, Department of Biology, KU Leuven, Leuven, Belgium., Van Oers K; Department of Animal Ecology, Netherlands Institute of Ecology, Wageningen, The Netherlands., Vargas-Chavez C; Institute of Evolutionary Biology (CSIC-Universitat Pompeu Fabra), Barcelona, Spain., Velickovic N; Department of Biology and Ecology, University of Novi Sad, Novi Sad, Serbia., Vella N; Conservation Biology Research Group, Department of Biology, University of Malta, Msida, Malta., Vella A; Conservation Biology Research Group, Department of Biology, University of Malta, Msida, Malta., Vernesi C; Forest Ecology Unit, Research and Innovation Centre-Fondazione Edmund Mach, San Michele All'Adige, Italy., Vicente S; CE3C-Centre for Ecology, Evolution and Environmental Changes & CHANGE-Global Change and Sustainability Institute, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, Lisboa, Portugal.; ERISA Escola Superior de Saúde Ribeiro Sanches, IPLUSO, Lisboa, Portugal., Villa S; Institute for Sustainable Plant Protection, National Research Council, Sesto Fiorentino, Italy.; Department of Agricultural and Environmental Sciences, University of Milan via Giovanni Celoria 2, Milan, Italy., Pettersson OV; SciLifeLab, Solna, Sweden.; Uppsala University, Uppsala, Sweden.; National Bioinformatics Infrastructure Sweden, Uppsala, Sweden., Volckaert FAM; Laboratory of Biodiversity and Evolutionary Genomics, KU Leuven, Leuven, Belgium., Voros J; Department of Zoology, Hungarian Natural History Museum, Budapest, Hungary., Wincker P; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, France., Winkler S; Department of Zoology, Faculty of Science, Charles University, Prague, Czech Republic., Ciofi C; Department of Biology, University of Florence, Sesto Fiorentino, Italy., Waterhouse RM; Department of Ecology and Evolution, University of Lausanne, Lausanne, Switzerland.; Swiss Institute of Bioinformatics, Lausanne, Switzerland., Mazzoni CJ; 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Publikováno v: Npj biodiversity [NPJ Biodivers] 2024 Oct 15; Vol. 3 (1), pp. 31. Date of Electronic Publication: 2024 Oct 15.

A DNA barcoding framework for taxonomic verification in the Darwin Tree of Life Project.

Autor: Twyford AD; Institute of Ecology and Evolution, The University of Edinburgh, Edinburgh, Scotland, EH9 3FL, UK.; Royal Botanic Garden Edinburgh, Edinburgh, Scotland, EH3 5LR, UK., Beasley J; Natural History Museum, London, England, SW7 5BD, UK., Barnes I; Natural History Museum, London, England, SW7 5BD, UK., Allen H; Natural History Museum, London, England, SW7 5BD, UK., Azzopardi F; The Marine Biological Association, Plymouth, England, PL1 2PB, UK., Bell D; Royal Botanic Garden Edinburgh, Edinburgh, Scotland, EH3 5LR, UK., Blaxter ML; Tree of Life, Wellcome Sanger Institute, Hinxton, England, CB10 1SA, UK., Broad G; Natural History Museum, London, England, SW7 5BD, UK., Campos-Dominguez L; Institute of Ecology and Evolution, The University of Edinburgh, Edinburgh, Scotland, EH9 3FL, UK.; Royal Botanic Garden Edinburgh, Edinburgh, Scotland, EH3 5LR, UK.; Centre for Research in Agricultural Genomics, Barcelona, Spain., Choonea D; Natural History Museum, London, England, SW7 5BD, UK., Crowley L; Department of Biology, University of Oxford, Oxford, England, OX1 3SZ, UK., Cuber P; Natural History Museum, London, England, SW7 5BD, UK., Cunliffe M; The Marine Biological Association, Plymouth, England, PL1 2PB, UK., Dombrowski A; Royal Botanic Gardens Kew, Richmond, England, TW9 3AB, UK., Douglas B; Royal Botanic Gardens Kew, Richmond, England, TW9 3AB, UK., Forrest LL; Royal Botanic Garden Edinburgh, Edinburgh, Scotland, EH3 5LR, UK., Gaya E; Royal Botanic Gardens Kew, Richmond, England, TW9 3AB, UK., Greeves C; Natural History Museum, London, England, SW7 5BD, UK., Griffin C; Natural History Museum, London, England, SW7 5BD, UK., Harley J; The Marine Biological Association, Plymouth, England, PL1 2PB, UK., Hart ML; Royal Botanic Garden Edinburgh, Edinburgh, Scotland, EH3 5LR, UK., Holland PWH; Department of Biology, University of Oxford, Oxford, England, OX1 3SZ, UK., Hollingsworth PM; Royal Botanic Garden Edinburgh, Edinburgh, Scotland, EH3 5LR, UK., Januszczak I; Natural History Museum, London, England, SW7 5BD, UK., Jones A; Royal Botanic Garden Edinburgh, Edinburgh, Scotland, EH3 5LR, UK., Kersey P; Royal Botanic Gardens Kew, Richmond, England, TW9 3AB, UK., Kilias E; Department of Biology, University of Oxford, Oxford, England, OX1 3SZ, UK., Lawniczak MKN; Tree of Life, Wellcome Sanger Institute, Hinxton, England, CB10 1SA, UK., Lewis OT; Department of Biology, University of Oxford, Oxford, England, OX1 3SZ, UK., Mian S; Royal Botanic Gardens Kew, Richmond, England, TW9 3AB, UK., Minotto A; Earlham Institute, Norwich, NR4 7UZ, UK., Misra R; Natural History Museum, London, England, SW7 5BD, UK., Mulhair PO; Department of Biology, University of Oxford, Oxford, England, OX1 3SZ, UK., Pereira da Conceicoa L; Tree of Life, Wellcome Sanger Institute, Hinxton, England, CB10 1SA, UK., Price BW; Natural History Museum, London, England, SW7 5BD, UK., Salatino S; Natural History Museum, London, England, SW7 5BD, UK., Shaw F; Earlham Institute, Norwich, NR4 7UZ, UK., Sivell O; Natural History Museum, London, England, SW7 5BD, UK., Sivess L; Natural History Museum, London, England, SW7 5BD, UK., Uhl R; The Marine Biological Association, Plymouth, England, PL1 2PB, UK., Woof K; Royal Botanic Gardens Kew, Richmond, England, TW9 3AB, UK.

Publikováno v: Wellcome open research [Wellcome Open Res] 2024 Jun 24; Vol. 9, pp. 339. Date of Electronic Publication: 2024 Jun 24 (Print Publication: 2024).

Draft Genome Sequences of Six Listeria monocytogenes Strains Isolated from Dairy Products from a Processing Plant in Southern Italy.

Autor: Chiara M; Dipartimento di Bioscienze, Università degli Studi di Milano, Milano, Italy., D'Erchia AM, Manzari C, Minotto A, Montagna C, Addante N, Santagada G, Latorre L, Pesole G, Horner DS, Parisi A

Publikováno v: Genome announcements [Genome Announc] 2014 Apr 10; Vol. 2 (2). Date of Electronic Publication: 2014 Apr 10.