Zobrazeno 1 - 10
of 21
pro vyhledávání: '"Milinn Kremitzki"'
Autor:
Wesley C. Warren, Tyler E. Boggs, Richard Borowsky, Brian M. Carlson, Estephany Ferrufino, Joshua B. Gross, LaDeana Hillier, Zhilian Hu, Alex C. Keene, Alexander Kenzior, Johanna E. Kowalko, Chad Tomlinson, Milinn Kremitzki, Madeleine E. Lemieux, Tina Graves-Lindsay, Suzanne E. McGaugh, Jeffrey T. Miller, Mathilda T. M. Mommersteeg, Rachel L. Moran, Robert Peuß, Edward S. Rice, Misty R. Riddle, Itzel Sifuentes-Romero, Bethany A. Stanhope, Clifford J. Tabin, Sunishka Thakur, Yoshiyuki Yamamoto, Nicolas Rohner
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-12 (2021)
Mexican Tetra cavefish have long been of interest in understanding adaptation to severe environmental change. Here the authors present a chromosome-level genome for the proxy-ancestral surface fish, and use CRISPR gene-editing to show the role of the
Externí odkaz:
https://doaj.org/article/e0b3331ea2974ca4af008dc49760b084
Autor:
Reuben M Buckley, Brian W Davis, Wesley A Brashear, Fabiana H G Farias, Kei Kuroki, Tina Graves, LaDeana W Hillier, Milinn Kremitzki, Gang Li, Rondo P Middleton, Patrick Minx, Chad Tomlinson, Leslie A Lyons, William J Murphy, Wesley C Warren
Publikováno v:
PLoS Genetics, Vol 16, Iss 10, p e1008926 (2020)
The domestic cat (Felis catus) numbers over 94 million in the USA alone, occupies households as a companion animal, and, like humans, suffers from cancer and common and rare diseases. However, genome-wide sequence variant information is limited for t
Externí odkaz:
https://doaj.org/article/f66873bec5b54e57a16b45a9e350d059
Autor:
Wesley C. Warren, LaDeana W. Hillier, Chad Tomlinson, Patrick Minx, Milinn Kremitzki, Tina Graves, Chris Markovic, Nathan Bouk, Kim D. Pruitt, Francoise Thibaud-Nissen, Valerie Schneider, Tamer A. Mansour, C. Titus Brown, Aleksey Zimin, Rachel Hawken, Mitch Abrahamsen, Alexis B. Pyrkosz, Mireille Morisson, Valerie Fillon, Alain Vignal, William Chow, Kerstin Howe, Janet E. Fulton, Marcia M. Miller, Peter Lovell, Claudio V. Mello, Morgan Wirthlin, Andrew S. Mason, Richard Kuo, David W. Burt, Jerry B. Dodgson, Hans H. Cheng
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 7, Iss 1, Pp 109-117 (2017)
The importance of the Gallus gallus (chicken) as a model organism and agricultural animal merits a continuation of sequence assembly improvement efforts. We present a new version of the chicken genome assembly (Gallus_gallus-5.0; GCA_000002315.3), bu
Externí odkaz:
https://doaj.org/article/707c7ed927fe4217bfe9c7aa6879408b
Autor:
Deanna M Church, Valerie A Schneider, Tina Graves, Katherine Auger, Fiona Cunningham, Nathan Bouk, Hsiu-Chuan Chen, Richa Agarwala, William M McLaren, Graham R S Ritchie, Derek Albracht, Milinn Kremitzki, Susan Rock, Holland Kotkiewicz, Colin Kremitzki, Aye Wollam, Lee Trani, Lucinda Fulton, Robert Fulton, Lucy Matthews, Siobhan Whitehead, Will Chow, James Torrance, Matthew Dunn, Glenn Harden, Glen Threadgold, Jonathan Wood, Joanna Collins, Paul Heath, Guy Griffiths, Sarah Pelan, Darren Grafham, Evan E Eichler, George Weinstock, Elaine R Mardis, Richard K Wilson, Kerstin Howe, Paul Flicek, Tim Hubbard
Publikováno v:
PLoS Biology, Vol 9, Iss 7, p e1001091 (2011)
Externí odkaz:
https://doaj.org/article/297bf140fa2042d7b30794a6953ec52d
Autor:
Sergey Nurk, Sergey Koren, Arang Rhie, Mikko Rautiainen, Andrey V. Bzikadze, Alla Mikheenko, Mitchell R. Vollger, Nicolas Altemose, Lev Uralsky, Ariel Gershman, Sergey Aganezov, Savannah J. Hoyt, Mark Diekhans, Glennis A. Logsdon, Michael Alonge, Stylianos E. Antonarakis, Matthew Borchers, Gerard G. Bouffard, Shelise Y. Brooks, Gina V. Caldas, Nae-Chyun Chen, Haoyu Cheng, Chen-Shan Chin, William Chow, Leonardo G. de Lima, Philip C. Dishuck, Richard Durbin, Tatiana Dvorkina, Ian T. Fiddes, Giulio Formenti, Robert S. Fulton, Arkarachai Fungtammasan, Erik Garrison, Patrick G. S. Grady, Tina A. Graves-Lindsay, Ira M. Hall, Nancy F. Hansen, Gabrielle A. Hartley, Marina Haukness, Kerstin Howe, Michael W. Hunkapiller, Chirag Jain, Miten Jain, Erich D. Jarvis, Peter Kerpedjiev, Melanie Kirsche, Mikhail Kolmogorov, Jonas Korlach, Milinn Kremitzki, Heng Li, Valerie V. Maduro, Tobias Marschall, Ann M. McCartney, Jennifer McDaniel, Danny E. Miller, James C. Mullikin, Eugene W. Myers, Nathan D. Olson, Benedict Paten, Paul Peluso, Pavel A. Pevzner, David Porubsky, Tamara Potapova, Evgeny I. Rogaev, Jeffrey A. Rosenfeld, Steven L. Salzberg, Valerie A. Schneider, Fritz J. Sedlazeck, Kishwar Shafin, Colin J. Shew, Alaina Shumate, Ying Sims, Arian F. A. Smit, Daniela C. Soto, Ivan Sović, Jessica M. Storer, Aaron Streets, Beth A. Sullivan, Françoise Thibaud-Nissen, James Torrance, Justin Wagner, Brian P. Walenz, Aaron Wenger, Jonathan M. D. Wood, Chunlin Xiao, Stephanie M. Yan, Alice C. Young, Samantha Zarate, Urvashi Surti, Rajiv C. McCoy, Megan Y. Dennis, Ivan A. Alexandrov, Jennifer L. Gerton, Rachel J. O’Neill, Winston Timp, Justin M. Zook, Michael C. Schatz, Evan E. Eichler, Karen H. Miga, Adam M. Phillippy
Publikováno v:
Science (New York, N.Y.), vol 376, iss 6588
Since its initial release in 2000, the human reference genome has covered only the euchromatic fraction of the genome, leaving important heterochromatic regions unfinished. Addressing the remaining 8% of the genome, the Telomere-to-Telomere (T2T) Con
Autor:
Sergey Nurk, Sergey Koren, Arang Rhie, Mikko Rautiainen, Andrey V. Bzikadze, Alla Mikheenko, Mitchell R. Vollger, Nicolas Altemose, Lev Uralsky, Ariel Gershman, Sergey Aganezov, Savannah J. Hoyt, Mark Diekhans, Glennis A. Logsdon, Michael Alonge, Stylianos E. Antonarakis, Matthew Borchers, Gerard G. Bouffard, Shelise Y. Brooks, Gina V. Caldas, Haoyu Cheng, Chen-Shan Chin, William Chow, Leonardo G. de Lima, Philip C. Dishuck, Richard Durbin, Tatiana Dvorkina, Ian T. Fiddes, Giulio Formenti, Robert S. Fulton, Arkarachai Fungtammasan, Erik Garrison, Patrick G.S. Grady, Tina A. Graves-Lindsay, Ira M. Hall, Nancy F. Hansen, Gabrielle A. Hartley, Marina Haukness, Kerstin Howe, Michael W. Hunkapiller, Chirag Jain, Miten Jain, Erich D. Jarvis, Peter Kerpedjiev, Melanie Kirsche, Mikhail Kolmogorov, Jonas Korlach, Milinn Kremitzki, Heng Li, Valerie V. Maduro, Tobias Marschall, Ann M. McCartney, Jennifer McDaniel, Danny E. Miller, James C. Mullikin, Eugene W. Myers, Nathan D. Olson, Benedict Paten, Paul Peluso, Pavel A. Pevzner, David Porubsky, Tamara Potapova, Evgeny I. Rogaev, Jeffrey A. Rosenfeld, Steven L. Salzberg, Valerie A. Schneider, Fritz J. Sedlazeck, Kishwar Shafin, Colin J. Shew, Alaina Shumate, Yumi Sims, Arian F. A. Smit, Daniela C. Soto, Ivan Sović, Jessica M. Storer, Aaron Streets, Beth A. Sullivan, Françoise Thibaud-Nissen, James Torrance, Justin Wagner, Brian P. Walenz, Aaron Wenger, Jonathan M. D. Wood, Chunlin Xiao, Stephanie M. Yan, Alice C. Young, Samantha Zarate, Urvashi Surti, Rajiv C. McCoy, Megan Y. Dennis, Ivan A. Alexandrov, Jennifer L. Gerton, Rachel J. O’Neill, Winston Timp, Justin M. Zook, Michael C. Schatz, Evan E. Eichler, Karen H. Miga, Adam M. Phillippy
In 2001, Celera Genomics and the International Human Genome Sequencing Consortium published their initial drafts of the human genome, which revolutionized the field of genomics. While these drafts and the updates that followed effectively covered the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a01c9a160fe87e3a4ab72701aa8a9141
https://doi.org/10.1101/2021.05.26.445798
https://doi.org/10.1101/2021.05.26.445798
Autor:
David H. O’Connor, Flavia Angela Maria Maggiolini, Claudia Rita Catacchio, Louis J. Picker, Nicholas Maurer, Jason G. Underwood, Jeffrey Rogers, Mitchell R. Vollger, Mark A. Batzer, Jeffrey A. Roberts, Ashley D. Sanders, Katherine M. Munson, Jessica M. Storer, Merly Escalona, Jon E. Levine, Muthuswamy Raveendran, Mario Ventura, Jason D Fernandes, Jan O. Korbel, Joseph W. Kemnitz, R. Alan Harris, Evan E. Eichler, Douglas L. Rosene, Shwetha C. Murali, Mark Diekhans, David Gordon, David Porubsky, Philip C. Dishuck, Erin L. Kinnally, LaDeana W. Hillier, Betsy Ferguson, Joel Armstrong, Chad Tomlinson, Zsofia Kovacs-Balint, Sara M Thomasy, Tina A. Graves-Lindsay, Roger W. Wiseman, Michael L. Platt, Peter A. Audano, Jerilyn A. Walker, Ian T. Fiddes, Benedict Paten, Elizabeth Devogelaere, David H. Abbott, J. H. Pate Skene, Marina Haukness, Mar M. Sanchez, Ned H. Kalin, Milinn Kremitzki, Alexandra P. Lewis, Francesca Antonacci, H. Michael Kubisch, Richard E. Green, John P. Capitanio, Yafei Mao, Sofie R. Salama, Ludovica Mercuri, Wesley C. Warren, Shelley A. Cole, Stanton B. Gray
Publikováno v:
Science
A high-quality rhesus macaque genome Genome technology has improved substantially since the first full organismal genomes were generated. Applying new technology, Warren et al. refined the genome of the rhesus macaque, a model nonhuman primate. Long-
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4986bfef80c6025ffb326a061e5304a7
https://europepmc.org/articles/PMC7818670/
https://europepmc.org/articles/PMC7818670/
Autor:
William J. Murphy, Tina Graves, Chad Tomlinson, LaDeana W. Hillier, Reuben M. Buckley, Kei Kuroki, Gang Li, Brian W. Davis, Leslie A. Lyons, Fabiana H.G. Farias, Wesley A. Brashear, Wesley C. Warren, Patrick Minx, Milinn Kremitzki, Rondo P. Middleton
Publikováno v:
PLoS Genetics
PLoS genetics, vol 16, iss 10
PLoS Genetics, Vol 16, Iss 10, p e1008926 (2020)
PLoS genetics, vol 16, iss 10
PLoS Genetics, Vol 16, Iss 10, p e1008926 (2020)
The domestic cat (Felis catus) numbers over 94 million in the USA alone, occupies households as a companion animal, and, like humans, suffers from cancer and common and rare diseases. However, genome-wide sequence variant information is limited for t
Autor:
Yafei Mao, Alexandra M. Lewis, Mario Ventura, Vladimir Larionov, Tina A. Graves-Lindsay, Mikhail Liskovykh, Adam M. Phillippy, Evan E. Eichler, Philip C. Dishuck, Melanie Sorensen, Shwetha C. Murali, Urvashi Surti, Chirag Jain, David Porubsky, Andrey Bzikadze, Ludovica Mercuri, Glennis A. Logsdon, Karen H. Miga, PingHsun Hsieh, Sergey Koren, Milinn Kremitzki, Katherine M. Munson, Leonardo G. de Lima, Carl Baker, Arang Rhie, Jennifer L. Gerton, Mitchell R. Vollger, Sergey Nurk, Kendra Hoekzema
The complete assembly of each human chromosome is essential for understanding human biology and evolution. Using complementary long-read sequencing technologies, we complete the first linear assembly of a human autosome, chromosome 8. Our assembly re
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9e84b62a868220b1a2eb6d63ead72005
https://doi.org/10.1101/2020.09.08.285395
https://doi.org/10.1101/2020.09.08.285395
Autor:
Philip C. Dishuck, Karen H. Miga, Leonardo G. de Lima, Glennis A. Logsdon, Mario Ventura, Katherine M. Munson, Sergey Koren, Mikhail Liskovykh, Evan E. Eichler, Sergey Nurk, Tina A. Graves-Lindsay, Chirag Jain, Andrey Bzikadze, Tatiana Dvorkina, Alexandra M. Lewis, William T. Harvey, Kendra Hoekzema, Arang Rhie, Carl Baker, Jennifer L. Gerton, Ludovica Mercuri, Shwetha C. Murali, Yafei Mao, David Porubsky, Vladimir Larionov, Adam M. Phillippy, Mitchell R. Vollger, Melanie Sorensen, Alla Mikheenko, PingHsun Hsieh, Milinn Kremitzki, Urvashi Surti
Publikováno v:
Nature
The complete assembly of each human chromosome is essential for understanding human biology and evolution1,2. Here we use complementary long-read sequencing technologies to complete the linear assembly of human chromosome 8. Our assembly resolves the