Zobrazeno 1 - 10
of 15
pro vyhledávání: '"Mikhail Rayko"'
Publikováno v:
Genome Biology, Vol 23, Iss 1, Pp 1-21 (2022)
Abstract Although the use of long-read sequencing improves the contiguity of assembled viral genomes compared to short-read methods, assembling complex viral communities remains an open problem. We describe the viralFlye tool for identification and a
Externí odkaz:
https://doaj.org/article/b0f13d1bc24e41c685a21b201ab1a186
Autor:
Sean Benler, Natalya Yutin, Dmitry Antipov, Mikhail Rayko, Sergey Shmakov, Ayal B. Gussow, Pavel Pevzner, Eugene V. Koonin
Publikováno v:
Microbiome, Vol 9, Iss 1, Pp 1-17 (2021)
Abstract Background Double-stranded DNA bacteriophages (dsDNA phages) play pivotal roles in structuring human gut microbiomes; yet, the gut virome is far from being fully characterized, and additional groups of phages, including highly abundant ones,
Externí odkaz:
https://doaj.org/article/3533cbb871954cbd950fed14fc5a3b75
Autor:
Irina Kravchenko, Mikhail Rayko, Ekaterina Tikhonova, Aleksey Konopkin, Evgeny Abakumov, Alla Lapidus
Publikováno v:
Microorganisms, Vol 10, Iss 11, p 2171 (2022)
Chernevaya taiga in West Siberia is a unique environment, with gigantism of grasses and shrubs. Exceptionally high productivity of plants is determined by the synergistic interaction of various factors, with a special role belonging to microorganisms
Externí odkaz:
https://doaj.org/article/ed55af99b20344e8ac605d32404d90b5
Publikováno v:
Journal of Fungi, Vol 7, Iss 11, p 908 (2021)
The Chernevaya taiga of Western Siberia is a unique and complex ecosystem, distinguished by the unusually large sizes of herbaceous plants, the reasons for which are poorly understood. Here, we explored the fungal diversity of the Chernevaya taiga so
Externí odkaz:
https://doaj.org/article/5bcaa1dc8c4742928bf67383b4a04974
Autor:
Yelisei Mesentsev, Natalya Bondarenko, Oksana Kamyshatskaya, Elena Nassonova, Anna Glotova, Sergey Loiko, Georgy Istigechev, Anastasia Kulemzina, Evgeny Abakumov, Mikhail Rayko, Alla Lapidus, Alexey Smirnov
Publikováno v:
Organisms Diversity & Evolution. 23:7-24
Autor:
Mikhail Rayko, Alla Lapidus, Sergey V. Loiko, Evgeny Abakumov, Nikolay Lashchinsky, G.I. Istigechev, Alexey Smirnov, Anastasia Kulemzina
Boreal forests are one of the largest stores of carbon on Earth, and two-thirds of them are located in Siberia. Despite the fact that these forests have a significant influence on the global climate, they continue to remain understudied. Chernevaya t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7ff44cebb1b71a10b0c7c0dce4734308
Autor:
Mikhail Rayko, Sean Benler, Sergey Shmakov, Dmitry Antipov, Igor Tolstoy, Eugene V. Koonin, Yuri I. Wolf, Pavel A. Pevzner, Natalya Yutin
CrAssphage is the most abundant virus identified in the human gut virome and the founding member of a large group of bacteriophages that infect bacteria of the phylum Bacteroidetes and have been discovered by metagenomics of both animal-associated an
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::aa740420daefb0db00ed966b1ab4e3fc
https://doi.org/10.1101/2020.07.20.212944
https://doi.org/10.1101/2020.07.20.212944
Autor:
Jeffrey Yuan, Pavel A. Pevzner, Evgeny Polevikov, Mikhail Rayko, Kristen L. Kuhn, Alexey Gurevich, Derek M. Bickhart, Mikhail Kolmogorov, Bahar Behsaz, Sung Bong Shin, Timothy P. L. Smith
Publikováno v:
Nature methods. 17(11)
Long-read sequencing technologies have substantially improved the assemblies of many isolate bacterial genomes as compared to fragmented short-read assemblies. However, assembling complex metagenomic datasets remains difficult even for state-of-the-a
Autor:
Andrey Komissarov, Mikhail Rayko
During the current outbreak of COVID-19, research labs around the globe submit sequences of the local SARS-CoV-2 genomes to the GISAID database to provide a comprehensive analysis of the variability and spread of the virus during the outbreak. We exp
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fbaf19acf708951f7061c0a99f031601
https://doi.org/10.1101/2020.04.26.062422
https://doi.org/10.1101/2020.04.26.062422
Long-read sequencing technologies substantially improved assemblies of many isolate bacterial genomes as compared to fragmented assemblies produced with short-read technologies. However, assembling complex metagenomic datasets remains a challenge eve
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6b933e369424d1c0200f8d0a2ffd7170