Zobrazeno 1 - 10
of 67
pro vyhledávání: '"Miha Moškon"'
Autor:
Eva Kočar, Sonja Katz, Žiga Pušnik, Cene Skubic, Tadeja Režen, Vitor A.P. Martins dos Santos, Miha Mraz, Miha Moškon, Damjana Rozman
Publikováno v:
STAR Protocols, Vol 5, Iss 3, Pp 103213- (2024)
Summary: The growing interest in clinical diagnostics has recently focused on metabolic biomarkers. Here, we present a protocol for sample preparation, extraction of cholesterol-related sterols, and quantification of 10 sterols in human blood serum s
Externí odkaz:
https://doaj.org/article/2f867cb2b9084d98950ab77d2ac0f316
Autor:
Miha Moškon, Urša Kovač, Lucija Raspor Dall’Olio, Ksenija Geršak, Gorazd Kavšek, Eva Bojc Šmid, Andreja Trojner Bregar, Damjana Rozman
Publikováno v:
Scientific Reports, Vol 14, Iss 1, Pp 1-12 (2024)
Abstract The labor is a physiological event considered to have its own circadian (diurnal) rhythm, but some of the data remain conflicting, especially for preterm births. In this retrospective study, we analyzed the circadian trends of labor onset ti
Externí odkaz:
https://doaj.org/article/f249611fdb0b44cd9b7ea923ba384cf5
Autor:
Eva Kočar, Sonja Katz, Žiga Pušnik, Petra Bogovič, Gabriele Turel, Cene Skubic, Tadeja Režen, Franc Strle, Vitor A.P. Martins dos Santos, Miha Mraz, Miha Moškon, Damjana Rozman
Publikováno v:
iScience, Vol 26, Iss 10, Pp 107799- (2023)
Summary: With COVID-19 becoming endemic, there is a continuing need to find biomarkers characterizing the disease and aiding in patient stratification. We studied the relation between COVID-19 and cholesterol biosynthesis by comparing 10 intermediate
Externí odkaz:
https://doaj.org/article/3958b7b48d78468b921574809fc47d07
Autor:
Andrew Walakira, Junior Ocira, Diane Duroux, Ramouna Fouladi, Miha Moškon, Damjana Rozman, Kristel Van Steen
Publikováno v:
BMC Bioinformatics, Vol 23, Iss 1, Pp 1-18 (2022)
Abstract Genes and gene products do not function in isolation but as components of complex networks of macromolecules through physical or biochemical interactions. Dependencies of gene mutations on genetic background (i.e., epistasis) are believed to
Externí odkaz:
https://doaj.org/article/f84edde8475c456a897bc76cb1305b58
Publikováno v:
Heliyon, Vol 8, Iss 8, Pp e10222- (2022)
Boolean descriptions of gene regulatory networks can provide an insight into interactions between genes. Boolean networks hold predictive power, are easy to understand, and can be used to simulate the observed networks in different scenarios.We revie
Externí odkaz:
https://doaj.org/article/2fb956673d7f4640b441cf37841f7bac
Publikováno v:
Computational and Structural Biotechnology Journal, Vol 19, Iss , Pp 3521-3530 (2021)
Omics data can be integrated into a reference model using various model extraction methods (MEMs) to yield context-specific genome-scale metabolic models (GEMs). How to chose the appropriate MEM, thresholding rule and threshold remains a challenge. W
Externí odkaz:
https://doaj.org/article/db4c20c2164a46089ee4723bddbac05a
Autor:
Miha Moškon
Publikováno v:
BMC Bioinformatics, Vol 21, Iss 1, Pp 1-12 (2020)
Abstract Background Even though several computational methods for rhythmicity detection and analysis of biological data have been proposed in recent years, classical trigonometric regression based on cosinor still has several advantages over these me
Externí odkaz:
https://doaj.org/article/cfa3597ffcaf4710856b0d6d1af6aef6
Autor:
Miha Moškon, Tadeja Režen
Publikováno v:
Metabolites, Vol 13, Iss 1, p 126 (2023)
Genome-scale metabolic models (GEMs) have found numerous applications in different domains, ranging from biotechnology to systems medicine. Herein, we overview the most popular algorithms for the automated reconstruction of context-specific GEMs usin
Externí odkaz:
https://doaj.org/article/2e80652899584622b9459c365e5dfe09
Autor:
Šimen Ravnik, Ines Žabkar, Uršula Prosenc Zmrzljak, Ivana Jovčevska, Neja Šamec, Miha Moškon, Alja Videtič Paska
Publikováno v:
Biomedical Engineering and Computational Biology, Vol 12 (2021)
With the increasing number of molecular biology techniques, large numbers of oligonucleotides are frequently involved in individual research projects. Thus, a dedicated electronic oligonucleotide management system is expected to provide several benef
Externí odkaz:
https://doaj.org/article/82417caeba91450d8df2f6c40ed97a0b
Publikováno v:
Journal of Biological Engineering, Vol 13, Iss 1, Pp 1-21 (2019)
Abstract Background Gene regulatory networks with different topological and/or dynamical properties might exhibit similar behavior. System that is less perceptive for the perturbations of its internal and external factors should be preferred. Methods
Externí odkaz:
https://doaj.org/article/0e3903343de046dfa3e476549bebb3c2