Zobrazeno 1 - 9
of 9
pro vyhledávání: '"Michal Wlasnowolski"'
Autor:
Michal Sadowski, Agnieszka Kraft, Przemyslaw Szalaj, Michal Wlasnowolski, Zhonghui Tang, Yijun Ruan, Dariusz Plewczynski
Publikováno v:
Genome Biology, Vol 20, Iss 1, Pp 1-5 (2019)
Following publication of the original article [1], it was noticed that the incorrect Fig. 2 and Fig. 3. were processed during production. It was also noticed that Fig. 4a was processed with a superfluous “1e7” symbol in the upper right corner.
Externí odkaz:
https://doaj.org/article/bd68005db75d4dbe9397e41848a9b6cf
Autor:
Michal Sadowski, Agnieszka Kraft, Przemyslaw Szalaj, Michal Wlasnowolski, Zhonghui Tang, Yijun Ruan, Dariusz Plewczynski
Publikováno v:
Genome Biology, Vol 20, Iss 1, Pp 1-27 (2019)
Abstract Background The number of reported examples of chromatin architecture alterations involved in the regulation of gene transcription and in disease is increasing. However, no genome-wide testing has been performed to assess the abundance of the
Externí odkaz:
https://doaj.org/article/30d8b3d8808d4731b7c9fca44a6675bb
Autor:
Jnanendra Prasad Sarkar, Indrajit Saha, Adrian Lancucki, Nimisha Ghosh, Michal Wlasnowolski, Grzegorz Bokota, Ashmita Dey, Piotr Lipinski, Dariusz Plewczynski
Publikováno v:
Frontiers in Genetics, Vol 11 (2020)
Genome-wide analysis of miRNA molecules can reveal important information for understanding the biology of cancer. Typically, miRNAs are used as features in statistical learning methods in order to train learning models to predict cancer. This motivat
Externí odkaz:
https://doaj.org/article/3928595b927b492bb6165e322fd9d534
Publikováno v:
BMC Medical Genomics, Vol 10, Iss S1, Pp 17-26 (2017)
Abstract Background Many genetic diseases are caused by mutations in non-coding regions of the genome. These mutations are frequently found in enhancer sequences, causing disruption to the regulatory program of the cell. Enhancers are short regulator
Externí odkaz:
https://doaj.org/article/1311f549b0694ddb8649a952e8d58f69
Publikováno v:
Nucleic Acids Research.
In the current update, we added a feature for analysing changes in spatial distances between promoters and enhancers in chromatin 3D model ensembles. We updated our datasets by the novel in situ CTCF and RNAPII ChIA-PET chromatin loops obtained from
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::2415ef0ef6791a808c1d634b67c2b8a7
https://doi.org/10.1093/nar/gkad354
https://doi.org/10.1093/nar/gkad354
Autor:
Karolina Jodkowska, Tymon Czarnota, Yijun Ruan, Dariusz Plewczynski, Zhonghui Tang, Michal Wlasnowolski, Przemyslaw Szalaj, Michal Sadowski
Publikováno v:
Nucleic Acids Research
Structural variants (SVs) that alter DNA sequence emerge as a driving force involved in the reorganisation of DNA spatial folding, thus affecting gene transcription. In this work, we describe an improved version of our integrated web service for stru
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7003f0c08c8cbf2bbe740818b10b7523
https://doi.org/10.1093/nar/gkaa388
https://doi.org/10.1093/nar/gkaa388
Publikováno v:
TENCON
Breast cancer is one of the most deadly cancers. It has four subtypes: Luminal A (LA), Luminal B (LB), HER2-enriched (HER2-E) and Basal-like (BL). For the cause of breast cancer subtypes, there are different genetic and epigenetic factors involved in
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::0907047cb9638ce2122e2411739517e7
https://doi.org/10.1109/tencon.2019.8929636
https://doi.org/10.1109/tencon.2019.8929636
Autor:
Michal Wlasnowolski, Somnath Rakshit, Dariusz Plewczynski, Monalisa Pal, Jnanendra Prasad Sarkar, Ujjwal Maulik, Indrajit Saha, Anasua Sarkar
Publikováno v:
GECCO (Companion)
MicroRNAs (miRNA) play an important role in various biological process by regulating gene expression. Their abnormal expression may lead to cancer. Therefore, analysis of such data may discover potential biological insight for cancer diagnosis. In th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::6f7c2441969b8c98068c450e3d0e332e
https://doi.org/10.1145/3319619.3326836
https://doi.org/10.1145/3319619.3326836
Autor:
Michal Wlasnowolski, Przemyslaw Szalaj, Zhonghui Tang, Yijun Ruan, Dariusz Plewczynski, Michal Sadowski, Agnieszka Kraft
This genome-wide study is focused on the impact of structural variants identified in individuals from 26 human populations onto three-dimensional structures of their genomes. We assess the tendency of structural variants to accumulate in spatially in
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f58b578882270dfd8cd66f5968b5b075
https://doi.org/10.1101/266981
https://doi.org/10.1101/266981
