Zobrazeno 1 - 10
of 50
pro vyhledávání: '"Michael R. Gryk"'
Autor:
Kumaran Baskaran, D. Levi Craft, Hamid R. Eghbalnia, Michael R. Gryk, Jeffrey C. Hoch, Mark W. Maciejewski, Adam D. Schuyler, Jonathan R. Wedell, Colin W. Wilburn
Publikováno v:
Frontiers in Molecular Biosciences, Vol 8 (2022)
The Biological Magnetic Resonance Data Bank (BMRB) has served the NMR structural biology community for 40 years, and has been instrumental in the development of many widely-used tools. It fosters the reuse of data resources in structural biology by e
Externí odkaz:
https://doaj.org/article/acfeec78d6e941dda60d35991514b1d8
Autor:
Jeffrey C Hoch, Kumaran Baskaran, Harrison Burr, John Chin, Hamid R Eghbalnia, Toshimichi Fujiwara, Michael R Gryk, Takeshi Iwata, Chojiro Kojima, Genji Kurisu, Dmitri Maziuk, Yohei Miyanoiri, Jonathan R Wedell, Colin Wilburn, Hongyang Yao, Masashi Yokochi
Publikováno v:
Nucleic Acids Research. 51:D368-D376
The Biological Magnetic Resonance Data Bank (BMRB, https://bmrb.io) is the international open data repository for biomolecular nuclear magnetic resonance (NMR) data. Comprised of both empirical and derived data, BMRB has applications in the study of
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d91d1e07c56e70e0a16882114dcc2d17
https://doi.org/10.1093/nar/gkac1050
https://doi.org/10.1093/nar/gkac1050
Autor:
Douglas Heintz, Michael R Gryk
Publikováno v:
International Journal of Digital Curation, Vol 13, Iss 1 (2019)
This paper describes our recent and ongoing efforts to enhance the curation of scientific workflows to improve reproducibility and reusability of biomolecular nuclear magnetic resonance (bioNMR) data. Our efforts have focused on both developing a wor
Externí odkaz:
https://doaj.org/article/1b65691af8fa4eb4b9baa5a9a40b7de4
Publikováno v:
Encyclopedia of Biophysics ISBN: 9783642359439
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::54ba2dcc14cedb427ae15308adab4110
https://doi.org/10.1007/978-3-642-35943-9_315-1
https://doi.org/10.1007/978-3-642-35943-9_315-1
Autor:
Michael R. Gryk, Gerard Weatherby
Publikováno v:
International journal of digital curation
International Journal of Digital Curation, Vol 15, Iss 1 (2020)
International Journal of Digital Curation, Vol 15, Iss 1 (2020)
This paper reports on the ongoing activities and curation practices of the National Center for Biomolecular NMR Data Processing and Analysis1. Over the past several years, the Center has been developing and extending computational workflow management
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4407a1b369719f62834ae16d9a31ba41
http://europepmc.org/articles/PMC7990377
http://europepmc.org/articles/PMC7990377
Autor:
Miron Livny, Frank Delaglio, Adam D. Schuyler, Mark W. Maciejewski, Michael R. Gryk, Eldon L. Ulrich, Jeffrey C. Hoch, Ion I. Moraru, Hamid R. Eghbalnia, Pedro R Romero
Publikováno v:
Biophysical Journal. 112:1529-1534
Advances in computation have been enabling many recent advances in biomolecular applications of NMR. Due to the wide diversity of applications of NMR, the number and variety of software packages for processing and analyzing NMR data is quite large, w
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a8084504d630dee61d5eed89390ae10e
https://doi.org/10.1016/j.bpj.2017.03.011
https://doi.org/10.1016/j.bpj.2017.03.011
Autor:
Bertram Ludäscher, Craig Willis, Timothy M. McPhillips, Michael R. Gryk, Santiago Núñez-Corrales
Publikováno v:
eScience
Research Objects have the potential to significantly enhance the reproducibility of scientific research. One important way Research Objects can do this is by encapsulating the means for re-executing the computational components of studies, thus suppo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2e75b2202d25a09ef001bbb9c2e58237
https://doi.org/10.1109/escience.2019.00066
https://doi.org/10.1109/escience.2019.00066
Autor:
Michael R. Gryk, Pedro R Romero, Mark W. Maciejewski, Jon Wedell, Adam D. Schuyler, Gerard Weatherby
Publikováno v:
JCDL
Scientific data repositories exist to provide access to research data as well as to promote their reuse. Research data communities currently recognize the FAIR Data Principles [1] as the standard for supporting the aforementioned goals. FAIR consists
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::6d9125dfbdf383d9e24683d4337cc974
https://doi.org/10.1109/jcdl.2019.00102
https://doi.org/10.1109/jcdl.2019.00102
Autor:
Michael R. Gryk, Bertram Ludäscher
Publikováno v:
Transforming Digital Worlds ISBN: 9783319781044
iConference
iConference
Two barriers to computational reproducibility are the ability to record the critical metadata required for rerunning a computation, as well as translating the semantics of the metadata so that alternate approaches can easily be configured for verifyi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8be1985a950c0a1b6fc46ed794fb7a3f
https://europepmc.org/articles/PMC6186436/
https://europepmc.org/articles/PMC6186436/
Autor:
Bertram Ludäscher, Michael R. Gryk
Publikováno v:
Library trends. 65(4)
The era of big data and ubiquitous computation has brought with it concerns about ensuring reproducibility in this new research environment. It is easy to assume computational methods self-document by their very nature of being exact, deterministic p
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6e5d615bb51c1347f97f99f1595e21cf
https://pubmed.ncbi.nlm.nih.gov/29375158
https://pubmed.ncbi.nlm.nih.gov/29375158