Zobrazeno 1 - 10
of 82
pro vyhledávání: '"Michael J McDonald"'
Autor:
Natalia C Rosas, Jonathan Wilksch, Jake Barber, Jiahui Li, Yanan Wang, Zhewei Sun, Andrea Rocker, Chaille T Webb, Laura Perlaza-Jiménez, Christopher J Stubenrauch, Vijaykrishna Dhanasekaran, Jiangning Song, George Taiaroa, Mark Davies, Richard A Strugnell, Qiyu Bao, Tieli Zhou, Michael J McDonald, Trevor Lithgow
Publikováno v:
eLife, Vol 12 (2023)
Antibiotic resistance is driven by selection, but the degree to which a bacterial strain’s evolutionary history shapes the mechanism and strength of resistance remains an open question. Here, we reconstruct the genetic and evolutionary mechanisms o
Externí odkaz:
https://doaj.org/article/06b253a4bac44817adcc36b210c3c5fe
Phenotypic and molecular evolution across 10,000 generations in laboratory budding yeast populations
Autor:
Milo S Johnson, Shreyas Gopalakrishnan, Juhee Goyal, Megan E Dillingham, Christopher W Bakerlee, Parris T Humphrey, Tanush Jagdish, Elizabeth R Jerison, Katya Kosheleva, Katherine R Lawrence, Jiseon Min, Alief Moulana, Angela M Phillips, Julia C Piper, Ramya Purkanti, Artur Rego-Costa, Michael J McDonald, Alex N Nguyen Ba, Michael M Desai
Publikováno v:
eLife, Vol 10 (2021)
Laboratory experimental evolution provides a window into the details of the evolutionary process. To investigate the consequences of long-term adaptation, we evolved 205 Saccharomyces cerevisiae populations (124 haploid and 81 diploid) for ~10,000 ge
Externí odkaz:
https://doaj.org/article/e8d8f2f76fba43eeaf3f7eae82f045e8
Autor:
Nerve Zhou, Krishna B S Swamy, Jun-Yi Leu, Michael J McDonald, Silvia Galafassi, Concetta Compagno, Jure Piškur
Publikováno v:
PLoS ONE, Vol 12, Iss 3, p e0173318 (2017)
The Crabtree positive yeasts, such as Saccharomyces cerevisiae, prefer fermentation to respiration, even under fully aerobic conditions. The selective pressures that drove the evolution of this trait remain controversial because of the low ATP yield
Externí odkaz:
https://doaj.org/article/df80bc2775c24960b1456d7432ca40e8
Publikováno v:
PLoS Biology, Vol 9, Iss 6, p e1000622 (2011)
The genome-sequencing gold rush has facilitated the use of comparative genomics to uncover patterns of genome evolution, although their causal mechanisms remain elusive. One such trend, ubiquitous to prokarya and eukarya, is the association of insert
Externí odkaz:
https://doaj.org/article/61e00a12a53d456c883edd9a28391ffa
Autor:
Jake N. Barber, Luke C. Nicholson, Laura C. Woods, Louise M. Judd, Aysha L. Sezmis, Jane Hawkey, Kathryn E. Holt, Michael J. McDonald
Publikováno v:
The ISME Journal. 16:1442-1452
Species loss within a microbial community can increase resource availability and spur adaptive evolution. Environmental shifts that cause species loss or fluctuations in community composition are expected to become more common, so it is important to
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6121d50223d6ec801a7924ee10de7a4f
https://doi.org/10.1038/s41396-022-01191-1
https://doi.org/10.1038/s41396-022-01191-1
Publikováno v:
Molecular Biology and Evolution. 40
Horizontal gene transfer (HGT) is important for microbial evolution, but how evolutionary forces shape the frequencies of horizontally transferred genetic variants in the absence of strong selection remains an open question. In this study, we evolve
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::0ce7f57516a39df5cb12b4f0bdbec584
https://doi.org/10.1093/molbev/msad028
https://doi.org/10.1093/molbev/msad028
Autor:
Natalia C. Rosas, Jonathan J. Wilksch, Jake Barber, Jiahui Li, Yanan Wang, Zhewei Sun, Andrea Rocker, Chaille Webb, Laura Perlaza-Jiménez, Christopher Stubenrauch, Dhanasekaran Vijaykrishna, Jiangning Song, George Taiaroa, Mark Davies, Richard A. Strugnell, Qiyu Bao, Tieli Zhou, Michael J. McDonald, Trevor Lithgow
Antibiotic resistance is driven by selection, but how a bacterial strain’s evolutionary history shapes drug-resistance remains an open question. Here we reconstruct the genetic and evolutionary mechanisms of carbapenem resistance in a clinical isol
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a529902de7825f79b28e53e68fc47ada
https://doi.org/10.1101/2022.08.30.505938
https://doi.org/10.1101/2022.08.30.505938
Autor:
Wai Hoe Chin, Ciaren Kett, Oren Cooper, Deike Müseler, Yaqi Zhang, Rebecca S. Bamert, Ruzeen Patwa, Laura C. Woods, Citsabehsan Devendran, Denis Korneev, Joe Tiralongo, Trevor Lithgow, Michael J. McDonald, Adrian Neild, Jeremy J. Barr
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America. 119(27)
The majority of viruses within the gut are obligate bacterial viruses known as bacteriophages (phages). Their bacteriotropism underscores the study of phage ecology in the gut, where they modulate and coevolve with gut bacterial communities. Traditio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0d1d3c8ab657515889709bff98d1335f
https://pubmed.ncbi.nlm.nih.gov/35767643
https://pubmed.ncbi.nlm.nih.gov/35767643
Autor:
Dustin J. Marshall, Martino Malerba, Thomas Lines, Aysha L. Sezmis, Chowdhury M. Hasan, Richard E. Lenski, Michael J. McDonald
Publikováno v:
Proceedings of the National Academy of Sciences. 119
Significance Populations of larger organisms should be more efficient in their resource use, but grow more slowly, than populations of smaller organisms. The relations between size, metabolism, and demography form the bedrock of metabolic theory, but
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::037c423afadf98e2f507a146d2a6b1f4
https://doi.org/10.1073/pnas.2200713119
https://doi.org/10.1073/pnas.2200713119
Autor:
An N. T. Nguyen, Laura C. Woods, Rebecca Gorrell, Shamitraa Ramanan, Terry Kwok, Michael J. McDonald
Publikováno v:
Proceedings of the National Academy of Sciences. 119
Significance Horizontal gene transfer (HGT)—the transfer of DNA between lineages—is responsible for a large proportion of the genetic variation that contributes to evolution in microbial populations. While HGT can bring beneficial genetic innovat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::86accbfb9111e0811abfd51d207b7fc9
https://doi.org/10.1073/pnas.2119010119
https://doi.org/10.1073/pnas.2119010119