Zobrazeno 1 - 10
of 28
pro vyhledávání: '"Michael Imelfort"'
Autor:
Michael Imelfort, Donovan Parks, Ben J. Woodcroft, Paul Dennis, Philip Hugenholtz, Gene W. Tyson
Publikováno v:
PeerJ, Vol 2, p e603 (2014)
Metagenomic binning methods that leverage differential population abundances in microbial communities (differential coverage) are emerging as a complementary approach to conventional composition-based binning. Here we introduce GroopM, an automated b
Externí odkaz:
https://doaj.org/article/4fb3da2c6c4c446b931486292be06fbd
Autor:
Stephen H Kazakoff, Michael Imelfort, David Edwards, Jasper Koehorst, Bandana Biswas, Jacqueline Batley, Paul T Scott, Peter M Gresshoff
Publikováno v:
PLoS ONE, Vol 7, Iss 12, p e51687 (2012)
Pongamia pinnata (syn. Millettia pinnata) is a novel, fast-growing arboreal legume that bears prolific quantities of oil-rich seeds suitable for the production of biodiesel and aviation biofuel. Here, we have used Illumina® 'Second Generation DNA Se
Externí odkaz:
https://doaj.org/article/b58a5590092e433c8d15d35d56399a6b
Autor:
Gene W. Tyson, Jason A. Steen, Paul G. Dennis, Michael Imelfort, Philip Hugenholtz, Rochelle M. Soo, Yuji Sekiguchi, Donovan H. Parks, Samuel J. Paech, Connor T. Skennerton
Publikováno v:
Genome Biology and Evolution
Molecular surveys of aphotic habitats have indicated the presence of major uncultured lineages phylogenetically classified as members of the Cyanobacteria. One of these lineages has recently been proposed as a nonphotosynthetic sister phylum to the C
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d284b2638cbb50c07cdec1b84fa83593
https://doi.org/10.1093/gbe/evu073
https://doi.org/10.1093/gbe/evu073
Autor:
Jurg Keller, Zhiguo Yuan, Ying Shi, Michael Imelfort, Philip Hugenholtz, Shihu Hu, Gene W. Tyson, Mohamed F. Haroon
Publikováno v:
Nature. 500:567-570
An anaerobic methanotroph (ANME-2d) can perform nitrate-driven anaerobic oxidation of methane through reverse methanogenesis, using nitrate as the terminal electron acceptor, and nitrite produced by ANME-2d is reduced to dinitrogen gas through a synt
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c595e101092ef5ea5665c51978cce19d
https://doi.org/10.1038/nature12375
https://doi.org/10.1038/nature12375
Autor:
Jaroslav Doležel, Lars Smits, Edmund Y. S. Ling, Delphine Fleury, Jiri Stiller, Paul J. Berkman, Jacqueline Batley, Sahana Manoli, Megan McKenzie, Michal T. Lorenc, Adam Skarshewski, Kaitao Lai, Marie Kubaláková, Hana Šimková, Chris Duran, Michael Imelfort, David Edwards
Publikováno v:
Plant Biotechnology Journal. 9:768-775
The genome of bread wheat (Triticum aestivum) is predicted to be greater than 16 Gbp in size and consist predominantly of repetitive elements, making the sequencing and assembly of this genome a major challenge. We have reduced genome sequence comple
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::224221b07abf9e941bfee06bc5afa3f5
https://doi.org/10.1111/j.1467-7652.2010.00587.x
https://doi.org/10.1111/j.1467-7652.2010.00587.x
Autor:
Dominic EalesD. Eales, Nikki Appleby, Jiri Stiller, Daniel MarshallD. Marshall, Chris Duran, Jacqueline Batley, Michael Imelfort, David Edwards, Terry Clark, Megan McKenzie, Kaye BasfordK. Basford, Paul J. Berkman
Publikováno v:
Genome. 53:1017-1023
Association mapping currently relies on the identification of genetic markers. Several technologies have been adopted for genetic marker analysis, with single nucleotide polymorphisms (SNPs) being the most popular where a reasonable quantity of genom
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::0a579ddb551bf5e9b2d50fdc80ecbad8
https://doi.org/10.1139/g10-057
https://doi.org/10.1139/g10-057
Publikováno v:
Plant Biotechnology Journal. 7:326-333
Molecular markers are used to provide the link between genotype and phenotype, for the production of molecular genetic maps and to assess genetic diversity within and between related species. Single nucleotide polymorphisms (SNPs) are the most abunda
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::051dd5b2902ce80a52914e342b8fb3bd
https://doi.org/10.1111/j.1467-7652.2009.00407.x
https://doi.org/10.1111/j.1467-7652.2009.00407.x
Autor:
Theresa Fyffe, Eldon E. Ball, Madeleine J. H. van Oppen, Timothy Ravasi, Shunichi Takahashi, Christian R. Voolstra, Hua Ying, Petra Lundgren, Susanne Sprungala, Mark A. Ragan, Nedeljka Rosic, Karin S. Kassahn, Ary A. Hoffmann, David J. Miller, Roger Beeden, Ove Hoegh-Guldberg, Michael L. Berumen, Kathleen M. Morrow, Karen D. Weynberg, Sylvain Forêt, Eva Abal, William Leggat, David G. Bourne, Michael Imelfort, Gene W. Tyson, Cheong Xin Chan
Publikováno v:
Frontiers in Marine Science, Vol 2 (2015)
Human-induced environmental changes have been linked directly with loss of biodiversity. Coral reefs, which have been severely impacted by anthropogenic activities over the last few decades, exemplify this global problem and provide an opportunity to
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4231a315c315706141b471cd462ee8a8
https://doi.org/10.3389/fmars.2015.00068
https://doi.org/10.3389/fmars.2015.00068
Large-scale recovery of genomes from isolates, single cells, and metagenomic data has been made possible by advances in computational methods and substantial reductions in sequencing costs. While this increasing breadth of draft genomes is providing
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::64423bd20dd849d29e75ef514cd4ad80
https://doi.org/10.7287/peerj.preprints.554v1
https://doi.org/10.7287/peerj.preprints.554v1
Autor:
Connor T. Skennerton, Rochelle M. Soo, Gene W. Tyson, Donovan H. Parks, Yuji Sekiguchi, Philip Hugenholtz, Samuel J. Paech, Paul G. Dennis, Michael Imelfort, Jason A. Steen
Molecular surveys of aphotic habitats have indicated the presence of major uncultured lineages phylogenetically classified as members of the Cyanobacteria. One of these lineages has recently been proposed as a non-photosynthetic sister phylum to the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2cf49ab4490148eee4629fa9b1658c0a
https://doi.org/10.7287/peerj.preprints.204v2
https://doi.org/10.7287/peerj.preprints.204v2