Zobrazeno 1 - 10
of 21
pro vyhledávání: '"Michael A Schon"'
Publikováno v:
Genome Biology, Vol 23, Iss 1, Pp 1-21 (2022)
Abstract We developed Bookend, a package for transcript assembly that incorporates data from different RNA-seq techniques, with a focus on identifying and utilizing RNA 5′ and 3′ ends. We demonstrate that correct identification of transcript star
Externí odkaz:
https://doaj.org/article/f8ce5169a3d8401b88a9fcba1ff28e08
Publikováno v:
Genome Biology, Vol 23, Iss 1, Pp 1-3 (2022)
Externí odkaz:
https://doaj.org/article/7499c28f0f5041a5960d65d4d16a9b98
Accurate annotation of transcript isoforms is crucial to understand gene functions, but automated methods for reconstructing full-length transcripts from RNA sequencing (RNA-seq) data remain imprecise. We developed Bookend, a software package for tra
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::32b0267c7893c12a754194b6bec6f1cd
https://doi.org/10.1101/2022.01.12.476004
https://doi.org/10.1101/2022.01.12.476004
Autor:
Stefan Oberlin, Rajendran Rajeswaran, Marieke Trasser, Verónica Barragán‐Borrero, Michael A Schon, Alexandra Plotnikova, Lukas Loncsek, Michael D Nodine, Arturo Marí‐Ordóñez, Olivier Voinnet
Publikováno v:
EMBO reports, vol 23, iss 3
Embo Reports, 23(3)
Embo Reports 23 (2022) 3
EMBO Reports, 23 (3)
Embo Reports, 23(3)
Embo Reports 23 (2022) 3
EMBO Reports, 23 (3)
Co-evolution between hosts' and parasites' genomes shapes diverse pathways of acquired immunity based on silencing small (s)RNAs. In plants, sRNAs cause heterochromatinization, sequence degeneration, and, ultimately, loss of autonomy of most transpos
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8d2b38cacb4c2525eb3eab2544983146
Autor:
Carlotta Porcelli, Michael D. Nodine, Peter Brodersen, Michael A. Schon, Sarah Rennie, Robin Andersson, Laura Arribas-Hernández, Balaji Enugutti
Gene regulation viaN6-methyladenosine (m6A) in mRNA involves RNA-binding proteins that recognize m6A via a YT521-B homology (YTH) domain. The plant YTH domain proteins ECT2 and ECT3 act genetically redundantly in stimulating cell proliferation during
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ed72f855cc573f2ab654c829aea88e4e
https://doi.org/10.1101/2021.08.01.454660
https://doi.org/10.1101/2021.08.01.454660
Autor:
Laura Arribas-Hernández, Sarah Rennie, Robin Andersson, Balaji Enugutti, Michael A. Schon, Peter Brodersen, Michael D. Nodine, Carlotta Porcelli
Publikováno v:
eLife 10 (2021)
eLife, 10
eLife
Arribas-Hernández, L, Rennie, S, Schon, M, Porcelli, C, Enugutti, B, Andersson, R, Nodine, M D & Brodersen, P 2021, ' The YTHDF proteins ECT2 and ECT3 bind largely overlapping target sets and influence target mRNA abundance, not alternative polyadenylation ', eLife, vol. 10, e72377 . https://doi.org/10.7554/eLife.72377
eLife, Vol 10 (2021)
eLife, 10
eLife
Arribas-Hernández, L, Rennie, S, Schon, M, Porcelli, C, Enugutti, B, Andersson, R, Nodine, M D & Brodersen, P 2021, ' The YTHDF proteins ECT2 and ECT3 bind largely overlapping target sets and influence target mRNA abundance, not alternative polyadenylation ', eLife, vol. 10, e72377 . https://doi.org/10.7554/eLife.72377
eLife, Vol 10 (2021)
Gene regulation via N6-methyladenosine (m6A) in mRNA involves RNA-binding proteins that recognize m6A via a YT521-B homology (YTH) domain. The plant YTH domain proteins ECT2 and ECT3 act genetically redundantly in stimulating cell proliferation durin
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::80ca12fb486d5ac15892f27bc9b32574
https://research.wur.nl/en/publications/the-ythdf-proteins-ect2-and-ect3-bind-largely-overlapping-target-
https://research.wur.nl/en/publications/the-ythdf-proteins-ect2-and-ect3-bind-largely-overlapping-target-
Publikováno v:
Development (Cambridge, England)
article-version (VoR) Version of Record
Development (Cambridge), 148(13)
Development (Cambridge) 148 (2021) 13
article-version (VoR) Version of Record
Development (Cambridge), 148(13)
Development (Cambridge) 148 (2021) 13
Soon after fertilization of egg and sperm, plant genomes become transcriptionally activated and drive a series of coordinated cell divisions to form the basic body plan during embryogenesis. Early embryonic cells rapidly diversify from each other, an
Autor:
Balaji Enugutti, Michael D. Nodine, Catherine Baxter, Michael A. Schon, Congyao Xu, Caroline Dean
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America, 118(17)
Proceedings of the National Academy of Sciences of the United States of America 118 (2021) 17
Proceedings of the National Academy of Sciences of the United States of America 118 (2021) 17
Quantitative variation in expression of the Arabidopsis floral repressor FLC influences whether plants overwinter before flowering, or have a rapid cycling habit enabling multiple generations a year. Genetic analysis has identified activators and rep
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::888ad87ad7dabcc32445ec9fec7aa40d
https://research.wur.nl/en/publications/antagonistic-activities-of-cotranscriptional-regulators-within-an
https://research.wur.nl/en/publications/antagonistic-activities-of-cotranscriptional-regulators-within-an
Autor:
Michael D. Nodine, Michael A. Schon
Publikováno v:
The Plant Cell
A major goal of global gene expression profiling in plant seeds has been to investigate the parental contributions to the transcriptomes of early embryos and endosperm. However, consistency between independent studies has been poor, leading to consid
Publikováno v:
The Plant Cell
SummaryMicroRNAs (miRNAs) are short non-coding RNAs that mediate the repression of target transcripts in plants and animals. Although miRNAs are required throughout plant development, relatively little is known regarding their embryonic functions. To
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ff8f38b89c9878b8c2fa0f769c7377f6
https://europepmc.org/articles/PMC6925019/
https://europepmc.org/articles/PMC6925019/