Zobrazeno 1 - 10
of 22
pro vyhledávání: '"Mia Husić"'
Autor:
Alaina Mahalanabis, Andrei L. Turinsky, Mia Husić, Erik Christensen, Ping Luo, Alaine Naidas, Michael Brudno, Trevor Pugh, Arun K. Ramani, Parisa Shooshtari
Publikováno v:
Computational and Structural Biotechnology Journal, Vol 20, Iss , Pp 6375-6387 (2022)
Tumors are complex biological entities that comprise cell types of different origins, with different mutational profiles and different patterns of transcriptional dysregulation. The exploration of data related to cancer biology requires careful analy
Externí odkaz:
https://doaj.org/article/ff2bc6b24902403e9edd7b45084e3ccf
Autor:
Jixuan Wang, Jingbo Yang, Haochi Zhang, Helen Lu, Marta Skreta, Mia Husić, Aryan Arbabi, Nicole Sultanum, Michael Brudno
Publikováno v:
npj Digital Medicine, Vol 5, Iss 1, Pp 1-9 (2022)
Abstract Current clinical note-taking approaches cannot capture the entirety of information available from patient encounters and detract from patient-clinician interactions. By surveying healthcare providers’ current note-taking practices and atti
Externí odkaz:
https://doaj.org/article/9c638992fbb3407c9cbc21ef9baa6a1a
Autor:
David W. Hogg, Mia Husić, David Wosnick, Thomas Dodsworth, Andrea L. D’Aquila, David A. Lovejoy
Publikováno v:
Frontiers in Neuroscience, Vol 13 (2019)
Teneurin C-terminal associated peptides (TCAPs) are an evolutionarily ancient family of 40- to 41-residue bioactive peptides located on the extracellular end of each of the four teneurin transmembrane proteins. TCAP-1 may exist as a tethered peptide
Externí odkaz:
https://doaj.org/article/cba51fc2be8a40369c90ccd472f97bb4
Publikováno v:
Frontiers in Endocrinology, Vol 10 (2019)
The teneurins are a family of four transmembrane proteins essential to intercellular adhesion processes, and are required for the development and maintenance of tissues. The Adhesion G protein-coupled receptor (GPCR) subclass latrophilins (ADGRL), or
Externí odkaz:
https://doaj.org/article/959045a6e805411a9e2df9deb493e133
Autor:
Erik Christensen, Ping Luo, Andrei Turinsky, Mia Husić, Alaina Mahalanabis, Alaine Naidas, Juan Javier Diaz-Mejia, Michael Brudno, Trevor Pugh, Arun Ramani, Parisa Shooshtari
Publikováno v:
Briefings in Bioinformatics. 24
Single-cell RNA sequencing (scRNA-seq) clustering and labelling methods are used to determine precise cellular composition of tissue samples. Automated labelling methods rely on either unsupervised, cluster-based approaches or supervised, cell-based
Autor:
Tugce B. Balci, Michael Brudno, Willie H. Chang, Annie Olry, Peter N. Robinson, Sylvie Maiella, Brittney Johnstone, Mia Husić, Sarah L. Sawyer, Pouria Mashouri, Alexander X. Lozano, Ana Rath
Publikováno v:
Genetics in Medicine. 22:1391-1400
Purpose Computational documentation of genetic disorders is highly relianton structured data for differential diagnosis, pathogenic variant identification, and patient matchmaking. However, most information on rare diseases (RDs) exists in free form
Autor:
Mia Husić, Michael Brudno, L. J. Dursi, Krista M. Pace, Coral-Sasso F, Naidoo D, Stephanie A. Grover, Yann Joly, Palmer Sl, Ponomarev A, Carl Virtanen, Memon N, Sevan Hakgor, Shaikh Rashid, Pierre-Olivier Quirion, Pierre-Étienne Jacques, de Borja R, L.L. Siu, Jones Sjm, Zhibin Lu, Bozoky Z, Wong M, David Bujold, Li J, Pavlov K, Lipski A, Trevor J. Pugh, Guillaume Bourque, Sethi A, Agarwal S, David Malkin
Rapid expansions of bioinformatics and computational biology have broadened the collection and use of -omics data including genomic, transcriptomic, methylomic and a myriad of other health data types, in the clinic and the laboratory. Both clinical a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::2240db0be4738dfccf14782b86b1c5b7
https://doi.org/10.1101/2021.03.30.434101
https://doi.org/10.1101/2021.03.30.434101
Autor:
Cynthia Hawkins, Yue Jiang, Michael Brudno, Michael Apostolides, Mia Husić, Andrei L. Turinsky, Arun K. Ramani, Robert Siddaway
Publikováno v:
Bioinformatics (Oxford, England).
Motivation Current fusion detection tools use diverse calling approaches and provide varying results, making selection of the appropriate tool challenging. Ensemble fusion calling techniques appear promising; however, current options have limited acc
Autor:
Hillary Elrick, Kevin L Lu, Mia Husić, Laura M. Richards, Parisa Shooshtari, Suluxan Mohanraj, Ping Luo, Samarth Patel, Erik Christensen, Danielle C Croucher, Alaine Naidas, Shaikh Rashid, Trevor J. Pugh, Arun K. Ramani, Prabnur Bal, Alaina Mahalanabis, J. Javier Díaz-Mejía, Martin D. Pham, Michael Brudno
Publikováno v:
Nucleic Acids Research
Paediatrics Publications
Paediatrics Publications
CReSCENTCanceR Single Cell ExpressioN Toolkit (https://crescent.cloud), is an intuitive and scalable web portal incorporating a containerized pipeline execution engine for standardized analysis of single-cell RNA sequencing (scRNA-seq) data. While sc
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c334f4b28de8a2054a2c90b681227b91
Autor:
Willie H, Chang, Pouria, Mashouri, Alexander X, Lozano, Brittney, Johnstone, Mia, Husić, Annie, Olry, Sylvie, Maiella, Tugce B, Balci, Sarah L, Sawyer, Peter N, Robinson, Ana, Rath, Michael, Brudno
Publikováno v:
Genetics in medicine : official journal of the American College of Medical Genetics. 22(8)
Computational documentation of genetic disorders is highly reliant on structured data for differential diagnosis, pathogenic variant identification, and patient matchmaking. However, most information on rare diseases (RDs) exists in freeform text, su