Measuring enzyme activities under standardized in vivo-like conditions for systems biology

Autor: van Eunen, K., Bouwman, J., Daran-Lapujade, P.A.L., Postmus, J., Canelas, A., Mensonides, F.I.C., Orij, R., Tuzun, I., van der Brink, J., Smits, G.J., van Gulik, W.M., Brul, S., Heijnen, J.J., de Winde, J.H., Teixeira de Mattos, M.J., Kettner, C., Nielsen, J., Westerhoff, H.V., Bakker, B.M.

Publikováno v: The FEBS Journal, 277(3), 749-760. Wiley-Blackwell
The FEBS Journal, 277, 749-760. Wiley-Blackwell
van Eunen, K, Bouwman, J, Daran-Lapujade, P A L, Postmus, J, Canelas, A, Mensonides, F I C, Orij, R, Tuzun, I, van der Brink, J, Smits, G J, van Gulik, W M, Brul, S, Heijnen, J J, de Winde, J H, Teixeira de Mattos, M J, Kettner, C, Nielsen, J, Westerhoff, H V & Bakker, B M 2010, ' Measuring enzyme activities under standardized in vivo-like conditions for Systems Biology ', The FEBS Journal, vol. 277, pp. 749-760 . https://doi.org/10.1111/j.1742-4658.2009.07524.x

Realistic quantitative models require data from many laboratories. Therefore, standardization of experimental systems and assay conditions is crucial. Moreover, standards should be representative of the in vivo conditions. However, most often, enzyme

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::8de1450623e2430b98ce45eb060f706b
https://dare.uva.nl/personal/pure/en/publications/measuring-enzyme-activities-under-standardized-in-vivolike-conditions-for-systems-biology(71b632a0-6a00-4848-ba52-5d24b4b5381c).html

A kinetic model as a tool to understand the response of Saccharomyces cerevisiae to heat exposure

Autor: Mensonides, F.I.C., Bakker, B., Brul, S., Hellingwerf, K.J., Teixeira De Mattos, M.J., Brul, S, van Gerwen, S., Zwietering, M.

Publikováno v: Modelling microorganisms in food., 228-245
STARTPAGE=228;ENDPAGE=245;TITLE=Modelling microorganisms in food.
Modelling microorganisms in Food., 228-249
STARTPAGE=228;ENDPAGE=249;TITLE=Modelling microorganisms in Food.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::58bf247e4345141979fb0c6a8b0e6b97
https://research.vu.nl/en/publications/33dc212a-e403-4ca8-b3be-d0c4657b4058

From cell to molecule and back; mechanistic modelling in the prediction of microbial food stability

Autor: Brul, S., Mensonides, F.I.C., Teixeira De Mattos, M.J., Resende, C., Boeree, P.T., Smits, G.J., van der Spek, J.C., Westerhoff, H.V., van Impe, J.F.M., Geeraerd, I., Leguerinel, I., Mafart, P.

Publikováno v: Predictive modelling in foods.

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https://dare.uva.nl/personal/pure/en/publications/from-cell-to-molecule-and-back-mechanistic-modelling-in-the-prediction-of-microbial-food-stability(6405240c-0364-4030-933f-059b27e8cf98).html

Metabolic control from the back benches: Biochemistry towards Biocomplexity

Autor: Westerhoff, H.V., Teusink, B., Mensonides, F.I.C., Reijenga, C.A., Esgalhado, M.E.L.M., Kholodenko, B.N., Somsen, O.J.G., van Heeswijk, W.C., Boogerd, F.C., Snoep, J.L., Cornish-Bowden, A.C., Cardenas, M.L.

Publikováno v: Technological and medical implications of Metabolic Control Analysis, 235-242
STARTPAGE=235;ENDPAGE=242;TITLE=Technological and medical implications of Metabolic Control Analysis

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=narcis______::bbe612b85c2ce923397479e5db74331c
https://research.vu.nl/en/publications/ce5836d3-8f0c-4574-b527-be16bd76654c

Metabolic control analysis reveals that glucose transport incompletely controls the glycolytic flux in Trypanosoma brucei

Autor: Bakker, B.M., Mensonides, F.I.C., ter Kuile, F.O., Michels, P.A.M., Westerhoff, H.V., Walsh, M.C., Pahlman, I-L., Larsson, C., Gustafsson, L.

Publikováno v: BioThermokinetics in the post Genomic Era, 66-70
STARTPAGE=66;ENDPAGE=70;TITLE=BioThermokinetics in the post Genomic Era

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=narcis______::45ac20c8a34fbc214008ed7e3dd57821
https://dare.uva.nl/personal/pure/en/publications/metabolic-control-analysis-reveals-that-glucose-transport-incompletely-controls-the-glycolytic-flux-in-trypanosoma-brucei(210f05d1-c7d7-4fd0-80ed-0a61d3420d3a).html