Zobrazeno 1 - 4
of 4
pro vyhledávání: '"Mei R M Du"'
Autor:
Luyi Tian, Jafar S. Jabbari, Rachel Thijssen, Quentin Gouil, Shanika L. Amarasinghe, Oliver Voogd, Hasaru Kariyawasam, Mei R. M. Du, Jakob Schuster, Changqing Wang, Shian Su, Xueyi Dong, Charity W. Law, Alexis Lucattini, Yair David Joseph Prawer, Coralina Collar-Fernández, Jin D. Chung, Timur Naim, Audrey Chan, Chi Hai Ly, Gordon S. Lynch, James G. Ryall, Casey J. A. Anttila, Hongke Peng, Mary Ann Anderson, Christoffer Flensburg, Ian Majewski, Andrew W. Roberts, David C. S. Huang, Michael B. Clark, Matthew E. Ritchie
Publikováno v:
Genome Biology, Vol 22, Iss 1, Pp 1-24 (2021)
Abstract A modified Chromium 10x droplet-based protocol that subsamples cells for both short-read and long-read (nanopore) sequencing together with a new computational pipeline (FLAMES) is developed to enable isoform discovery, splicing analysis, and
Externí odkaz:
https://doaj.org/article/b1aa5d4188e746cca4e60723f7229ae1
Autor:
Nusrat Nahar, Greg Tram, Freda E-C Jen, Zachary N Phillips, Lucy A Weinert, Janine T Bossé, Jafar S Jabbari, Quentin Gouil, Mei R M Du, Matthew E Ritchie, Rory Bowden, Paul R Langford, Alexander W Tucker, Michael P Jennings, Conny Turni, Patrick J Blackall, John M Atack
Publikováno v:
Nucleic Acids Research. 51:3240-3260
Actinobacillus pleuropneumoniae is the cause of porcine pleuropneumonia, a severe respiratory tract infection that is responsible for major economic losses to the swine industry. Many host-adapted bacterial pathogens encode systems known as phasevari
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::906b9ff000eb5448d15cc98a5f086485
https://doi.org/10.1093/nar/gkad091
https://doi.org/10.1093/nar/gkad091
Autor:
Xueyi Dong, Mei R. M. Du, Quentin Gouil, Luyi Tian, Jafar S. Jabbari, Rory Bowden, Pedro L. Baldoni, Yunshun Chen, Gordon K. Smyth, Shanika L. Amarasinghe, Charity W. Law, Matthew E. Ritchie
The current lack of benchmark datasets with inbuilt ground-truth makes it challenging to compare the performance of existing long-read isoform detection and differential expression analysis workflows. Here, we present a benchmark experiment using two
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::69cd6c4a297726898cd9091ae2c35315
https://doi.org/10.1101/2022.07.22.501076
https://doi.org/10.1101/2022.07.22.501076
Autor:
Shanika L. Amarasinghe, Mei R. M. Du, Jakob Schuster, Michael B. Clark, Changqing Wang, Yair David Joseph Prawer, Xueyi Dong, Audrey S. M. Chan, Mary Ann Anderson, Casey J. A. Anttila, James G. Ryall, Gordon S. Lynch, Hasaru Kariyawasam, Ian J. Majewski, Jafar S. Jabbari, Christoffer Flensburg, Andrew W. Roberts, Charity W. Law, Shian Su, Luyi Tian, Hongke Peng, Quentin Gouil, Chi Hai Ly, Coralina Collar-Fernández, Timur Naim, Alexis Lucattini, David C.S. Huang, Rachel Thijssen, Oliver Voogd, Matthew E. Ritchie, Jin D. Chung
Publikováno v:
Genome Biology
Genome Biology, Vol 22, Iss 1, Pp 1-24 (2021)
Genome Biology, Vol 22, Iss 1, Pp 1-24 (2021)
A modified Chromium 10x droplet-based protocol that subsamples cells for both short-read and long-read (nanopore) sequencing together with a new computational pipeline (FLAMES) is developed to enable isoform discovery, splicing analysis, and mutation
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0e289a038a95ecf949613a0b20be17e8
http://europepmc.org/articles/PMC8582192
http://europepmc.org/articles/PMC8582192