High-quality draft genome sequence of the Thermus amyloliquefaciens type strain YIM 77409Twith an incomplete denitrification pathway

Autor: Zhou, EM, Murugapiran, SK, Mefferd, CC, Liu, L, Xian, WD, Yin, YR, Ming, H, Yu, TT, Huntemann, M, Clum, A, Pillay, M, Palaniappan, K, Varghese, N, Mikhailova, N, Stamatis, D, Reddy, TBK, Ngan, CY, Daum, C, Shapiro, N, Markowitz, V, Ivanova, N, Spunde, A, Kyrpides, N, Woyke, T, Li, WJ, Hedlund, BP

Publikováno v: Zhou, EM; Murugapiran, SK; Mefferd, CC; Liu, L; Xian, WD; Yin, YR; et al.(2016). High-quality draft genome sequence of the Thermus amyloliquefaciens type strain YIM 77409Twith an incomplete denitrification pathway. Standards in Genomic Sciences, 11(1). doi: 10.1186/s40793-016-0140-3. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/49c6b0bb

© 2016 Zhou et al. Thermus amyloliquefaciens type strain YIM 77409Tis a thermophilic, Gram-negative, non-motile and rod-shaped bacterium isolated from Niujie Hot Spring in Eryuan County, Yunnan Province, southwest China. In the present study we desc

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od_______325::b37d74bdc3407ceebabc6564476edd40
http://www.escholarship.org/uc/item/49c6b0bb

Incomplete denitrification phenotypes in diverse Thermus species from diverse geothermal spring sediments and adjacent soils in southwest China.

Autor: Mefferd CC; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, USA., Zhou E; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, USA.; School of Earth Sciences, Yunnan University, Kunming, People's Republic of China.; State Key Laboratory of Biocontrol, Guangdong Provincial Key Laboratory of Plant Resources and Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), School of Life Sciences, Sun Yat-Sen University, Guangzhou, People's Republic of China., Seymour CO; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, USA., Bernardo NA; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, USA., Srivastava S; Department of Geology and Environmental Earth Science, Miami University, Oxford, OH, USA., Bengtson AJ; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, USA.; SWCA Environmental Consultants, Las Vegas, NV, USA., Jiao JY; State Key Laboratory of Biocontrol, Guangdong Provincial Key Laboratory of Plant Resources and Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), School of Life Sciences, Sun Yat-Sen University, Guangzhou, People's Republic of China., Dong H; Department of Geology and Environmental Earth Science, Miami University, Oxford, OH, USA.; State Key Laboratory of Biogeology and Environmental Geology and Institute of Earth Sciences, China University of Geosciences, Beijing, People's Republic of China., Li WJ; State Key Laboratory of Biocontrol, Guangdong Provincial Key Laboratory of Plant Resources and Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), School of Life Sciences, Sun Yat-Sen University, Guangzhou, People's Republic of China. liwenjun3@mail.sysu.edu.cn., Hedlund BP; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, USA. brian.hedlund@unlv.edu.; Nevada Institute for Personalized Medicine, University of Nevada, Las Vegas, Las Vegas, NV, USA. brian.hedlund@unlv.edu.

Publikováno v: Extremophiles : life under extreme conditions [Extremophiles] 2022 Jul 08; Vol. 26 (2), pp. 23. Date of Electronic Publication: 2022 Jul 08.

A High-Fat/High-Protein, Atkins-Type Diet Exacerbates Clostridioides ( Clostridium ) difficile Infection in Mice, whereas a High-Carbohydrate Diet Protects.

Autor: Mefferd CC; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA., Bhute SS; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA., Phan JR; Department of Chemistry and Biochemistry, University of Nevada, Las Vegas, Las Vegas, Nevada, USA., Villarama JV; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA., Do DM; Department of Chemistry and Biochemistry, University of Nevada, Las Vegas, Las Vegas, Nevada, USA., Alarcia S; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA., Abel-Santos E; Department of Chemistry and Biochemistry, University of Nevada, Las Vegas, Las Vegas, Nevada, USA Ernesto.abelsantos@unlv.edu brian.hedlund@unlv.edu.; Nevada Institute of Personalized Medicine, University of Nevada, Las Vegas, Las Vegas, Nevada, USA., Hedlund BP; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA Ernesto.abelsantos@unlv.edu brian.hedlund@unlv.edu.; Nevada Institute of Personalized Medicine, University of Nevada, Las Vegas, Las Vegas, Nevada, USA.

Publikováno v: MSystems [mSystems] 2020 Feb 11; Vol. 5 (1). Date of Electronic Publication: 2020 Feb 11.

Thermus sediminis sp. nov., a thiosulfate-oxidizing and arsenate-reducing organism isolated from Little Hot Creek in the Long Valley Caldera, California.

Autor: Zhou EM; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, People's Republic of China.; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, 89154, USA., Xian WD; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, People's Republic of China., Mefferd CC; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, 89154, USA., Thomas SC; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, 89154, USA., Adegboruwa AL; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, 89154, USA., Williams N; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, 89154, USA.; Las Vegas High School PAL Program, Clark County School District, Las Vegas, NV, 89154, USA., Murugapiran SK; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, 89154, USA., Dodsworth JA; Department of Biology, California State University, San Bernardino, San Bernardino, CA, USA., Ganji R; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, 89154, USA., Li MM; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, People's Republic of China., Ding YP; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, People's Republic of China., Liu L; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, People's Republic of China., Woyke T; Department of Energy, Joint Genome Institute, Walnut Creek, CA, 94598, USA.; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA., Li WJ; State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, People's Republic of China. liwenjun3@mail.sysu.edu.cn., Hedlund BP; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, NV, 89154, USA. brian.hedlund@unlv.edu.; Nevada Institute of Personalized Medicine, University of Nevada, Las Vegas, Las Vegas, NV, 89154, USA. brian.hedlund@unlv.edu.

Publikováno v: Extremophiles : life under extreme conditions [Extremophiles] 2018 Nov; Vol. 22 (6), pp. 983-991. Date of Electronic Publication: 2018 Sep 15.

High-Quality Draft Genomes from Thermus caliditerrae YIM 77777 and T. tengchongensis YIM 77401, Isolates from Tengchong, China.

Autor: Mefferd CC; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA., Zhou EM; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou, China Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan Institute of Microbiology, Yunnan University, Kunming, China., Yu TT; Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan Institute of Microbiology, Yunnan University, Kunming, China., Ming H; Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan Institute of Microbiology, Yunnan University, Kunming, China., Murugapiran SK; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA., Huntemann M; Department of Energy Joint Genome Institute, Walnut Creek, California, USA., Clum A; Department of Energy Joint Genome Institute, Walnut Creek, California, USA., Pillay M; Department of Energy Joint Genome Institute, Walnut Creek, California, USA., Palaniappan K; Department of Energy Joint Genome Institute, Walnut Creek, California, USA., Varghese N; Department of Energy Joint Genome Institute, Walnut Creek, California, USA., Mikhailova N; Department of Energy Joint Genome Institute, Walnut Creek, California, USA., Stamatis D; Department of Energy Joint Genome Institute, Walnut Creek, California, USA., Reddy TB; Department of Energy Joint Genome Institute, Walnut Creek, California, USA., Ngan CY; Department of Energy Joint Genome Institute, Walnut Creek, California, USA., Daum C; Department of Energy Joint Genome Institute, Walnut Creek, California, USA., Duffy K; Department of Energy Joint Genome Institute, Walnut Creek, California, USA., Shapiro N; Department of Energy Joint Genome Institute, Walnut Creek, California, USA., Markowitz V; Department of Energy Joint Genome Institute, Walnut Creek, California, USA., Ivanova N; Department of Energy Joint Genome Institute, Walnut Creek, California, USA., Kyrpides N; Department of Energy Joint Genome Institute, Walnut Creek, California, USA., Williams AJ; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA SWCA Environmental Consultants, Las Vegas, Nevada, USA., Woyke T; Department of Energy Joint Genome Institute, Walnut Creek, California, USA., Li WJ; State Key Laboratory of Biocontrol and Guangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University, Guangzhou, China Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan Institute of Microbiology, Yunnan University, Kunming, China liwenjun@ms.xjb.ac.cn brian.hedlund@unlv.edu., Hedlund BP; School of Life Sciences, University of Nevada, Las Vegas, Las Vegas, Nevada, USA Nevada Institute of Personalized Medicine, University of Nevada, Las Vegas, Las Vegas, Nevada, USA liwenjun@ms.xjb.ac.cn brian.hedlund@unlv.edu.

Publikováno v: Genome announcements [Genome Announc] 2016 Apr 28; Vol. 4 (2). Date of Electronic Publication: 2016 Apr 28.