Patterns, mechanisms, and consequences of homoeologous exchange in allopolyploid angiosperms: a genomic and epigenomic perspective.

Autor: Deb SK; Department of Biological Sciences, The University of Alabama, Tuscaloosa, AL, 35487, USA.; Department of Forestry and Environmental Science, Shahjalal University of Science and Technology, Sylhet, 3114, Bangladesh., Edger PP; Department of Horticulture, Michigan State University, East Lansing, MI, 48823, USA.; Genetics and Genome Sciences Program, Michigan State University, East Lansing, MI, 48823, USA., Pires JC; Department of Soil and Crop Sciences, Colorado State University, Fort Collins, CO, 80523, USA., McKain MR; Department of Biological Sciences, The University of Alabama, Tuscaloosa, AL, 35487, USA.

Publikováno v: The New phytologist [New Phytol] 2023 Jun; Vol. 238 (6), pp. 2284-2304. Date of Electronic Publication: 2023 Apr 27.

Dynamic genome evolution in a model fern.

Autor: Marchant DB; Department of Biology, Stanford University, Stanford, CA, USA. danielm1@stanford.edu., Chen G; Central Laboratory, State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Zhejiang Academy of Agricultural Sciences, Hangzhou, China.; College of Agriculture, Yangtze University, Jingzhou, China., Cai S; College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.; School of Science, Western Sydney University, Penrith, New South Wales, Australia., Chen F; College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China., Schafran P; Boyce Thompson Institute, Ithaca, NY, USA., Jenkins J; Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA., Shu S; United States Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Plott C; Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA., Webber J; Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA., Lovell JT; Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.; United States Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., He G; United States Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Sandor L; United States Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Williams M; Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA., Rajasekar S; Arizona Genomics Institute, School of Plant Sciences, University of Arizona, Tucson, AZ, USA., Healey A; Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA., Barry K; United States Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Zhang Y; Institute of Bioinformatics, University of Georgia, Athens, GA, USA., Sessa E; Department of Biology, University of Florida, Gainesville, FL, USA., Dhakal RR; Department of Biological Sciences, University of Alabama in Huntsville, Huntsville, AL, USA., Wolf PG; Department of Biological Sciences, University of Alabama in Huntsville, Huntsville, AL, USA., Harkess A; Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.; Department of Crop, Soil, and Environmental Sciences, Auburn University, Auburn, AL, USA., Li FW; Boyce Thompson Institute, Ithaca, NY, USA.; Plant Biology Section, Cornell University, Ithaca, NY, USA., Rössner C; Justus-Liebig-University, Department of Biology and Chemistry, Institute of Botany, Gießen, Germany., Becker A; Justus-Liebig-University, Department of Biology and Chemistry, Institute of Botany, Gießen, Germany., Gramzow L; Matthias Schleiden Institute/Genetics, Friedrich Schiller University Jena, Jena, Germany., Xue D; College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China., Wu Y; College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, China., Tong T; College of Agriculture, Yangtze University, Jingzhou, China., Wang Y; Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China., Dai F; College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China., Hua S; Institute of Crops and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou, China., Wang H; State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Virology and Biotechnology, Zhejiang Academy of Agricultural Sciences, Hangzhou, China., Xu S; College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China., Xu F; College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China., Duan H; Institute for Forest Resources & Environment of Guizhou, Key Laboratory of Forest Cultivation in Plateau Mountain of Guizhou Province, College of Forestry, Guizhou University, Guiyang, China., Theißen G; Matthias Schleiden Institute/Genetics, Friedrich Schiller University Jena, Jena, Germany., McKain MR; Department of Biological Sciences, University of Alabama, Tuscaloosa, AL, USA., Li Z; Department of Integrative Biology, University of Texas at Austin, Austin, TX, USA., McKibben MTW; Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ, USA., Barker MS; Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ, USA., Schmitz RJ; Department of Genetics, University of Georgia, Athens, GA, USA., Stevenson DW; New York Botanical Garden, Bronx, NY, USA., Zumajo-Cardona C; New York Botanical Garden, Bronx, NY, USA., Ambrose BA; New York Botanical Garden, Bronx, NY, USA., Leebens-Mack JH; Department of Plant Biology, University of Georgia, Athens, GA, USA. jleebensmack@uga.edu., Grimwood J; Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA., Schmutz J; Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA.; United States Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Soltis PS; Florida Museum of Natural History, University of Florida, Gainesville, FL, USA. psoltis@flmnh.ufl.edu., Soltis DE; Department of Biology, University of Florida, Gainesville, FL, USA. dsoltis@ufl.edu.; Florida Museum of Natural History, University of Florida, Gainesville, FL, USA. dsoltis@ufl.edu., Chen ZH; School of Science, Western Sydney University, Penrith, New South Wales, Australia. z.chen@westernsydney.edu.au.; Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia. z.chen@westernsydney.edu.au.

Publikováno v: Nature plants [Nat Plants] 2022 Sep; Vol. 8 (9), pp. 1038-1051. Date of Electronic Publication: 2022 Sep 01.

Chromosome-Scale Genome for a Red-Fruited, Perpetual Flowering and Runnerless Woodland Strawberry ( Fragaria vesca ).

Autor: Alger EI; Department of Horticulture, Michigan State University, East Lansing, MI, United States., Platts AE; Department of Horticulture, Michigan State University, East Lansing, MI, United States., Deb SK; Department of Biological Sciences, University of Alabama, Tuscaloosa, AL, United States.; Department of Forestry and Environmental Science, Shahjalal University of Science and Technology, Sylhet, Bangladesh., Luo X; Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD, United States., Ou S; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA, United States., Cao Y; College of Life Science, Inner Mongolia University, Hohhot, China., Hummer KE; USDA ARS National Clonal Germplasm Repository, Corvallis, OR, United States., Xiong Z; College of Life Science, Inner Mongolia University, Hohhot, China., Knapp SJ; Department of Plant Sciences, University of California, Davis, Davis, CA, United States., Liu Z; Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD, United States., McKain MR; Department of Biological Sciences, University of Alabama, Tuscaloosa, AL, United States., Edger PP; Department of Horticulture, Michigan State University, East Lansing, MI, United States.; Genetics and Genome Sciences Program, Michigan State University, East Lansing, MI, United States.

Publikováno v: Frontiers in genetics [Front Genet] 2021 Jul 16; Vol. 12, pp. 671371. Date of Electronic Publication: 2021 Jul 16 (Print Publication: 2021).

Botany is the root and the future of invasion biology.

Autor: Sutherland BL; Department of Biology, University of Louisiana at Lafayette, Lafayette, LA, USA., Barrett CF; Department of Biology, West Virginia University, Morgantown, WV, USA., Beck JB; Biological Sciences Department, Wichita State University, Wichita, KS, USA., Latvis M; Department of Natural Resources Management, South Dakota State University, Brookings, SD, USA., McKain MR; Department of Biological Sciences, University of Alabama, Tuscaloosa, AL, USA., Sigel EM; Department of Biological Sciences, University of New Hampshire, Durham, NH, USA., Kooyers NJ; Department of Biology, University of Louisiana at Lafayette, Lafayette, LA, USA.

Publikováno v: American journal of botany [Am J Bot] 2021 Apr; Vol. 108 (4), pp. 549-552. Date of Electronic Publication: 2021 Apr 23.

Hybridization History and Repetitive Element Content in the Genome of a Homoploid Hybrid, Yucca gloriosa (Asparagaceae).

Autor: Heyduk K; School of Life Sciences, University of Hawai'i at Mānoa, Honolulu, HI, United States.; Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT, United States., McAssey EV; School of Life Sciences, University of Hawai'i at Mānoa, Honolulu, HI, United States.; Department of Biological Sciences, Quinnipiac University, Hamden, CT, United States.; Department of Biology and Environmental Science, University of New Haven, West Haven, CT, United States., Grimwood J; HudsonAlpha Institute for Biotechnology, Huntsville, AL, United States., Shu S; Lawrence Berkeley National Laboratory, US Department of Energy Joint Genome Institute, Berkeley, CA, United States., Schmutz J; HudsonAlpha Institute for Biotechnology, Huntsville, AL, United States.; Lawrence Berkeley National Laboratory, US Department of Energy Joint Genome Institute, Berkeley, CA, United States., McKain MR; Department of Biological Sciences, University of Alabama, Tuscaloosa, AL, United States., Leebens-Mack J; Department of Plant Biology, University of Georgia, Athens, GA, United States.

Publikováno v: Frontiers in plant science [Front Plant Sci] 2021 Jan 15; Vol. 11, pp. 573767. Date of Electronic Publication: 2021 Jan 15 (Print Publication: 2020).