Zobrazeno 1 - 10
of 232
pro vyhledávání: '"Mayank N"'
Autor:
Changxu Fan, Xiaoyun Xing, Samuel J. H. Murphy, Jennifer Poursine-Laurent, Heather Schmidt, Bijal A. Parikh, Jeesang Yoon, Mayank N. K. Choudhary, Naresha Saligrama, Sytse J. Piersma, Wayne M. Yokoyama, Ting Wang
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-19 (2024)
Abstract Comparative genomics has revealed the rapid expansion of multiple gene families involved in immunity. Members within each gene family often evolved distinct roles in immunity. However, less is known about the evolution of their epigenome and
Externí odkaz:
https://doaj.org/article/2e1544ec47b24a0fa0e54cc35c3f6b85
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-12 (2023)
Here the authors show transposable elements, formerly considered junk DNA, are a source of CTCF binding sites that contribute to species-specific 3D-genome structure, and may impact gene regulation during the course of mammalian evolution.
Externí odkaz:
https://doaj.org/article/3e5b04c52e4b40f4bb3b5cc423a9dd70
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-16 (2019)
Although most are silenced, certain transposable elements (TEs) have been co-opted by the host. Here, the authors quantify the epigenomic status of TEs using data from the Roadmap Epigenomics Project, provide a systematic profile of TE activity acros
Externí odkaz:
https://doaj.org/article/9be8243c98f04693903b38c681d2a1b9
Autor:
Rajesh P. N. Rao, Nisha Yadav, Mayank N. Vahia, Hrishikesh Joglekar, Ronojoy Adhikari, Iravatham Mahadevan
Publikováno v:
Computational Linguistics, Vol 36, Iss 4 (2021)
Externí odkaz:
https://doaj.org/article/094857c56ce048828d704be5cae673f1
Autor:
Yanli Wang, Fan Song, Bo Zhang, Lijun Zhang, Jie Xu, Da Kuang, Daofeng Li, Mayank N. K. Choudhary, Yun Li, Ming Hu, Ross Hardison, Ting Wang, Feng Yue
Publikováno v:
Genome Biology, Vol 19, Iss 1, Pp 1-12 (2018)
Abstract Here, we introduce the 3D Genome Browser, http://3dgenome.org, which allows users to conveniently explore both their own and over 300 publicly available chromatin interaction data of different types. We design a new binary data format for Hi
Externí odkaz:
https://doaj.org/article/4290e9e990e34eceaea270782e57743b
Autor:
Vasavi Sundaram, Mayank N. K. Choudhary, Erica Pehrsson, Xiaoyun Xing, Christopher Fiore, Manishi Pandey, Brett Maricque, Methma Udawatta, Duc Ngo, Yujie Chen, Asia Paguntalan, Tammy Ray, Ava Hughes, Barak A. Cohen, Ting Wang
Publikováno v:
Nature Communications, Vol 8, Iss 1, Pp 1-12 (2017)
The gene-battery model posits transposable elements (TEs) may becis-regulatory elements to control gene expression. Here, mouse-specific TEs are shown as binding sites for multiple collaborating transcription factors in embryonic stem cells, and act
Externí odkaz:
https://doaj.org/article/9182e1481f7b4fb78384a75c96e24065
Autor:
Mayank N. K. Choudhary, Ryan Z. Friedman, Julia T. Wang, Hyo Sik Jang, Xiaoyu Zhuo, Ting Wang
Publikováno v:
Genome Biology, Vol 21, Iss 1, Pp 1-2 (2020)
Following publication of the original paper [1], an error was reported in the processing of Fig. 2. The correct Fig. 2 is supplied below and the original article [1] has been corrected. The publishers apologize for the error.
Externí odkaz:
https://doaj.org/article/78850894676443dfa07e18b7f22ae685
Publikováno v:
PLoS ONE, Vol 12, Iss 5, p e0176985 (2017)
A diffusion equation has been used to study migration of early humans into the South Asian subcontinent. The diffusion equation is tempered by a set of parameters that account for geographical features like proximity to water resources, altitude, and
Externí odkaz:
https://doaj.org/article/0ec20ba96fb04f69b41b10dba2ac8a22
Publikováno v:
PLoS ONE, Vol 11, Iss 5, p e0154641 (2016)
BACKGROUND:Early human migration is largely determined by geography and human needs. These are both deterministic parameters when small populations move into unoccupied areas where conflicts and large group dynamics are not important. The early perio
Externí odkaz:
https://doaj.org/article/6cbb16c2de6f48438e0ebafc671ecc09
Autor:
Nisha Yadav, Hrishikesh Joglekar, Rajesh P N Rao, Mayank N Vahia, Ronojoy Adhikari, Iravatham Mahadevan
Publikováno v:
PLoS ONE, Vol 5, Iss 3, p e9506 (2010)
The Indus script is one of the major undeciphered scripts of the ancient world. The small size of the corpus, the absence of bilingual texts, and the lack of definite knowledge of the underlying language has frustrated efforts at decipherment since t
Externí odkaz:
https://doaj.org/article/e3f78267d9d04ad7ae5230aa2d864abf