Zobrazeno 1 - 10
of 57
pro vyhledávání: '"Matus, Valach"'
Autor:
Matus Valach, Sandrine Moreira, Celine Petitjean, Corinna Benz, Anzhelika Butenko, Olga Flegontova, Anna Nenarokova, Galina Prokopchuk, Tom Batstone, Pascal Lapébie, Lionnel Lemogo, Matt Sarrasin, Paul Stretenowich, Pragya Tripathi, Euki Yazaki, Takeshi Nara, Bernard Henrissat, B. Franz Lang, Michael W. Gray, Tom A. Williams, Julius Lukeš, Gertraud Burger
Publikováno v:
BMC Biology, Vol 21, Iss 1, Pp 1-17 (2023)
Abstract Background Diplonemid flagellates are among the most abundant and species-rich of known marine microeukaryotes, colonizing all habitats, depths, and geographic regions of the world ocean. However, little is known about their genomes, biology
Externí odkaz:
https://doaj.org/article/d52b66df69fd49b39786a1f81803704a
Autor:
Verena Endmayr, Cansu Tunc, Lara Ergin, Anna De Rosa, Rosa Weng, Lukas Wagner, Thin-Yau Yu, Andreas Fichtenbaum, Thomas Perkmann, Helmuth Haslacher, Nicolas Kozakowski, Carmen Schwaiger, Gerda Ricken, Simon Hametner, Sigrid Klotz, Lívia Almeida Dutra, Christian Lechner, Désirée de Simoni, Kai-Nicolas Poppert, Georg Johannes Müller, Susanne Pirker, Walter Pirker, Aleksandra Angelovski, Matus Valach, Michelangelo Maestri, Melania Guida, Roberta Ricciardi, Florian Frommlet, Daniela Sieghart, Miklos Pinter, Karl Kircher, Gottfried Artacker, Romana Höftberger, Inga Koneczny
Publikováno v:
Frontiers in Immunology, Vol 12 (2022)
BackgroundIgG4 is associated with two emerging groups of rare diseases: 1) IgG4 autoimmune diseases (IgG4-AID) and 2) IgG4-related diseases (IgG4-RLD). Anti-neuronal IgG4-AID include MuSK myasthenia gravis, LGI1- and Caspr2-encephalitis and autoimmun
Externí odkaz:
https://doaj.org/article/52df9cde5bcf4c4991369c2ebf5cf182
Autor:
Matus Valach, Corinna Benz, Lisbeth C Aguilar, Ondřej Gahura, Drahomíra Faktorová, Alena Zíková, Marlene Oeffinger, Gertraud Burger, Michael W Gray, Julius Lukeš
Publikováno v:
Nucleic Acids Research.
The mitochondrial ribosome (mitoribosome) has diverged drastically from its evolutionary progenitor, the bacterial ribosome. Structural and compositional diversity is particularly striking in the phylum Euglenozoa, with an extraordinary protein gain
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::43a68514548759078252f6848c2223c2
https://doi.org/10.1093/nar/gkad422
https://doi.org/10.1093/nar/gkad422
Autor:
Matus Valach, Lena Graf, Corinna Benz, Binnypreet Kaur, Drahomíra Faktorová, Gertraud Burger, Julius Lukeš
Publikováno v:
Environmental Microbiology. 22:3660-3670
Diplonemids are a group of highly diverse and abundant marine microeukaryotes that belong to the phylum Euglenozoa and form a sister clade to the well-studied, mostly parasitic kinetoplastids. Very little is known about the biology of diplonemids, as
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5831acb615951af20e89fa7e50e245a8
https://doi.org/10.1111/1462-2920.15130
https://doi.org/10.1111/1462-2920.15130
Autor:
Gertraud Burger, Matus Valach, Kristína Záhonová, Galina Prokopchuk, Drahomíra Faktorová, Julius Lukeš, Binnypreet Kaur
Publikováno v:
Nucleic Acids Research
Diplonemids are highly abundant heterotrophic marine protists. Previous studies showed that their strikingly bloated mitochondrial genome is unique because of systematic gene fragmentation and manifold RNA editing. Here we report a comparative study
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2bb86d417e8773770a2bd92ebd7ab946
https://doi.org/10.1093/nar/gkz1215
https://doi.org/10.1093/nar/gkz1215
Autor:
Verena, Endmayr, Cansu, Tunc, Lara, Ergin, Anna, De Rosa, Rosa, Weng, Lukas, Wagner, Thin-Yau, Yu, Andreas, Fichtenbaum, Thomas, Perkmann, Helmuth, Haslacher, Nicolas, Kozakowski, Carmen, Schwaiger, Gerda, Ricken, Simon, Hametner, Sigrid, Klotz, Lívia Almeida, Dutra, Christian, Lechner, Désirée, de Simoni, Kai-Nicolas, Poppert, Georg Johannes, Müller, Susanne, Pirker, Walter, Pirker, Aleksandra, Angelovski, Matus, Valach, Michelangelo, Maestri, Melania, Guida, Roberta, Ricciardi, Florian, Frommlet, Daniela, Sieghart, Miklos, Pinter, Karl, Kircher, Gottfried, Artacker, Romana, Höftberger, Inga, Koneczny
Publikováno v:
Frontiers in Immunology
Background IgG4 is associated with two emerging groups of rare diseases: 1) IgG4 autoimmune diseases (IgG4-AID) and 2) IgG4-related diseases (IgG4-RLD). Anti-neuronal IgG4-AID include MuSK myasthenia gravis, LGI1- and Caspr2-encephalitis and autoimmu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::a6632aed4f108e691a24834d2fdda217
https://pubmed.ncbi.nlm.nih.gov/35095860
https://pubmed.ncbi.nlm.nih.gov/35095860
Autor:
Matus Valach
Variant protocol for transformation of Diplonema papillatum by electroporation using a "home-made" transformation buffer. The procedure was devised based on previously published protocols by Kaur et al. (DOI: 10.1111/1462-2920.14041) and Dyer et al.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::70d09af932b0ead8cde2b7482cfd9f7d
https://doi.org/10.17504/protocols.io.bq3nmyme
https://doi.org/10.17504/protocols.io.bq3nmyme
Autor:
Gertraud Burger, Matus Valach, Michael W. Gray, José Angel Gonzalez Alcazar, Matt Sarrasin, B. Franz Lang
Publikováno v:
Molecular Biology and Evolution
The mitoribosome, as known from studies in model organisms, deviates considerably from its ancestor, the bacterial ribosome. Deviations include substantial reduction of the mitochondrial ribosomal RNA (mt-rRNA) structure and acquisition of numerous m
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8a5f57e8b49703f59a290b138eb43bfc
https://pubmed.ncbi.nlm.nih.gov/32886790
https://pubmed.ncbi.nlm.nih.gov/32886790
Autor:
Matus Valach
A simple protocol for high-molecular weight (HMW) DNA extraction from Diplonema papillatum. The material was used to prepare a Nanopore library using a standard ligation kit (SQK-LSK109) for a subsequent Nanopore sequencing run with satisfactory resu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::7f4c289cbd2d7cc8ea462dd13ac6413b
https://doi.org/10.17504/protocols.io.bb5eiq3e
https://doi.org/10.17504/protocols.io.bb5eiq3e
Autor:
Deepak Nanjappa, Iñaki Ruiz-Trillo, Christopher J. Howe, Chris Bowler, Mariusz Nowacki, Anastasios D. Tsaousis, Noelia Lander, Christopher L. Dupont, Shinichiro Maruyama, Fulei Luan, Andrew E. Allen, Anna M. G. Novák Vanclová, Pamela A. Silver, Nastasia J. Freyria, Peter von Dassow, Elisabeth Hehenberger, Konomi Fujimura-Kamada, Julius Lukeš, Roberto Docampo, Deborah L. Robertson, Thomas E. Clemente, Sebastián R. Najle, Kathryn J. Coyne, Cristina Aresté, Brittany N. Sprecher, Lu Wang, Eleanna Kazana, Verónica Freire-Benéitez, Vladimír Hampl, Cecilia Balestreri, Isabel C. Nimmo, Mariana Rius, Yoshihisa Hirakawa, Arnab Pain, Jorge Ibañez, Elin Einarsson, Lev Tsypin, Heriberto Cerutti, Adrian C. Barbrook, G. Jason Smith, Alexandra Z. Worden, Jian Guo, Jean Claude Lozano, Virginia P. Edgcomb, Huan Zhang, Andrea Highfield, Isaac Núñez, Fatma Gomaa, Jan Pyrih, Natalia Ewa Janowicz, Sara J. Bender, Ross F. Waller, Tobias von der Haar, François-Yves Bouget, Matus Valach, Amanda Hopes, Luke M. Noble, Paulo A. Garcia, Nicholas A.T. Irwin, Tamara Matute, Jernej Turnšek, Ian Hu, Sandra Pucciarelli, Fernán Federici, Valérie Vergé, R. Ellen R. Nisbet, Miguel Angel Chiurillo, Mark Moosburner, Monika Abedin Sigg, Aaron P. Turkewitz, Albane Ruaud, Angela Piersanti, Sebastian G. Gornik, Peter R. Girguis, Adam C. Jones, Lawrence A. Klobutcher, Claudio H. Slamovits, Elena Casacuberta, Imen Lassadi, Elizabeth C. Cooney, Kodai Fukuda, Nicole King, Manuel Ares, Jonathan Z. Kaye, Lisa Sudek, Patrick Beardslee, Cristina Miceli, Xiaoxue Wen, Estienne C. Swart, Yuu Ishii, Ambar Kachale, Pia A. Elustondo, Esteban R. Haro-Contreras, Patrick J. Keeling, José A. Fernández Robledo, Glen L. Wheeler, Colin Brownlee, Rowena Stern, Joshua S. Rest, Susana A. Breglia, Senjie Lin, Duncan B. Coles, Jackie L. Collier, Drahomíra Faktorová, David S. Booth, April Woods, Binnypreet Kaur, Thomas Mock, Gertraud Burger, Jun Minagawa, Yutaka Hanawa, Zhu-Hong Li, Rachele Cesaroni
Publikováno v:
Nature Methods
Nature Methods, Nature Publishing Group, 2020, 17 (5), pp.481-494. ⟨10.1038/s41592-020-0796-x⟩
Nature Methods, Nature Publishing Group, 2020, ⟨10.1038/s41592-020-0796-x⟩
Digital.CSIC. Repositorio Institucional del CSIC
instname
Nature Methods, Nature Publishing Group, 2020, 17 (5), pp.481-494. ⟨10.1038/s41592-020-0796-x⟩
Nature Methods, Nature Publishing Group, 2020, ⟨10.1038/s41592-020-0796-x⟩
Digital.CSIC. Repositorio Institucional del CSIC
instname
Diverse microbial ecosystems underpin life in the sea. Among these microbes are many unicellular eukaryotes that span the diversity of the eukaryotic tree of life. However, genetic tractability has been limited to a few species, which do not represen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e2626a2a63747a5e98954e7333b8e730
http://hdl.handle.net/11581/428891
http://hdl.handle.net/11581/428891