ProteINSIDE to Easily Investigate Proteomics Data from Ruminants: Application to Mine Proteome of Adipose and Muscle Tissues in Bovine Foetuses.

Autor: Nicolas Kaspric, Brigitte Picard, Matthieu Reichstadt, Jérémy Tournayre, Muriel Bonnet

Publikováno v: PLoS ONE, Vol 10, Iss 5, p e0128086 (2015)

Genomics experiments are widely acknowledged to produce a huge amount of data to be analysed. The challenge is to extract meaningful biological context for proteins or genes which is currently difficult because of the lack of an integrative workflow

Externí odkaz: https://doaj.org/article/93c53c6b46754464817f95da0de9fe36

Molecular signatures of muscle growth and composition deciphered by the meta-analysis of age-related public transcriptomics data

Autor: Matthieu Reichstadt, Florence Jaffrézic, Patrice Dehais, Denis Laloë, Christophe Klopp, Muriel Bonnet, Jeanne Bazile

Publikováno v: Physiological Genomics
Physiological Genomics, 2020, 52 (8), pp.322-332. ⟨10.1152/physiolgenomics.00020.2020⟩
Physiological Genomics, American Physiological Society, 2020, 52 (8), pp.322-332. ⟨10.1152/physiolgenomics.00020.2020⟩

The lean-to-fat ratio is a major issue in the beef meat industry from both carcass and meat production perspectives. This industrial perspective has motivated meat physiologists to use transcriptomics technologies to decipher mechanisms behind fat de

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d3b0b26a540554a36901d43e3ab75f26
https://doi.org/10.1152/physiolgenomics.00020.2020

'Do my qPCR calculation', a web tool

Autor: Céline Jousse, Jérémy Tournayre, Laurent Parry, Matthieu Reichstadt, Pierre Fafournoux

Publikováno v: Bioinformation
Bioinformation, 2019, 15 (5), pp.369-372. ⟨10.6026/97320630015369⟩
Bioinformation 5 (15), 369-372. (2019)

eCollection 2019; In order to automatically process qPCR raw data, we present the tool "Do my qPCR calculation". We offer a website to automatically calculate the data normalization and represent the different samples graphically in an Excel file. Th

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2fa49fd8bcdca6a0eb60448451108ebc
https://hal.archives-ouvertes.fr/hal-02172518/document

Meta-analysis of the comparison of the metabolic and contractile characteristics of two bovine muscles: Longissimus thoracis and semitendinosus

Autor: Laurent Journaux, Jean-François Hocquette, Catherine Jurie, Brigitte Picard, Sghaier Chriki, Matthieu Reichstadt, Didier Micol, Jean-Paul Brun

Publikováno v: Meat Science
Meat Science, Elsevier, 2012, 91 (4), pp.423-429. ⟨10.1016/j.meatsci.2012.02.026⟩

International audience; This study used the BIF-Beef data warehouse to determine whether semitendinosus (ST) was a muscle with a faster contraction speed and more glycolytic than longissimus thoracis (LT), regardless of the sex and breed of animals.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::37d34e8a874bb20c1b29a6897d466864
https://doi.org/10.1016/j.meatsci.2012.02.026

Fat and Muscle DB: integrating ‘omics’ data from adipose tissue and muscle

Autor: Jérémy Tournayre, Isabelle Cassar Malek, Matthieu Reichstadt, Brigitte Picard, Nicolas Kaspric, Muriel Bonnet

Publikováno v: 5. Management Committee Meeting and the 4. Meeting of Working Groups 1, 2, 3 of COST Action FA 1002
5. Management Committee Meeting and the 4. Meeting of Working Groups 1, 2, 3 of COST Action FA 1002, Nov 2014, Milan, Italy. pp.91-94
HAL
5ème Management Committee Meeting and the 4ème Meeting of Working Groups. 2014; 5. Management Committee Meeting and the 4. Meeting of Working Groups 1, 2, 3 of COST Action FA 1002, Milan, ITA, 2014-11-17-2014-11-18

International audience

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::ff3d1a79caf4d826bf2eb9fe82822ae0
https://hal.inrae.fr/hal-02739418/file/2014_Tournayre_Fat_1