Zobrazeno 1 - 10
of 26
pro vyhledávání: '"Matthew W Peterson"'
Autor:
Jared D Sharp, Atul K Singh, Sang Tae Park, Anna Lyubetskaya, Matthew W Peterson, Antonio L C Gomes, Lakshmi-Prasad Potluri, Sahadevan Raman, James E Galagan, Robert N Husson
Publikováno v:
PLoS ONE, Vol 11, Iss 3, p e0152145 (2016)
Expression of SigH, one of 12 Mycobacterium tuberculosis alternative sigma factors, is induced by heat, oxidative and nitric oxide stresses. SigH activation has been shown to increase expression of several genes, including genes involved in maintaini
Externí odkaz:
https://doaj.org/article/1bfa65289d2e40f5bfa25a9fe9a112fd
Autor:
Rachel M Berquist, Kristen M Gledhill, Matthew W Peterson, Allyson H Doan, Gregory T Baxter, Kara E Yopak, Ning Kang, H J Walker, Philip A Hastings, Lawrence R Frank
Publikováno v:
PLoS ONE, Vol 7, Iss 4, p e34499 (2012)
Museum fish collections possess a wealth of anatomical and morphological data that are essential for documenting and understanding biodiversity. Obtaining access to specimens for research, however, is not always practical and frequently conflicts wit
Externí odkaz:
https://doaj.org/article/15570b4d7da74125a46fb9732ae87a34
Autor:
Matthew W Peterson, Steven Z Fairchild, Tamara C Otto, Mojdeh Mohtashemi, Douglas M Cerasoli, Wenling E Chang
Publikováno v:
PLoS ONE, Vol 6, Iss 5, p e20335 (2011)
Human Serum paraoxonase 1 (HuPON1) is an enzyme that has been shown to hydrolyze a variety of chemicals including the nerve agent VX. While wildtype HuPON1 does not exhibit sufficient activity against VX to be used as an in vivo countermeasure, it ha
Externí odkaz:
https://doaj.org/article/1d58d3316629452080c13c1295c48823
Autor:
Tonia Korves, Patricia L. McDermott, Robyn Kozierok, John S. Aberdeen, Bradley A. Goodman, Matthew W. Peterson, Christopher D. Garay, Lynette Hirschman, Cheryl Clark
Publikováno v:
Frontiers in Artificial Intelligence, Vol 4 (2021)
Frontiers in Artificial Intelligence
Frontiers in Artificial Intelligence
There is a growing desire to create computer systems that can collaborate with humans on complex, open-ended activities. These activities typically have no set completion criteria and frequently involve multimodal communication, extensive world knowl
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e307fb888e437b40c9369523b7a6d05d
https://www.frontiersin.org/articles/10.3389/frai.2021.670009/full
https://www.frontiersin.org/articles/10.3389/frai.2021.670009/full
Autor:
Elham Azizi, Matthew W. Peterson, Kristina M. Smith, Jennifer M. Hurley, James E. Galagan, Cheng Wu, Jillian M. Emerson, Rigzin Dekhang, Nirmala Karunarathna, Jay C. Dunlap, Deborah Bell-Pedersen, Matthew S. Sachs, Teresa M. Lamb, Michael Freitag, Erin L. Bredeweg, Anna Lyubetskaya, Oneida Ibarra
Publikováno v:
G3: Genes|Genomes|Genetics
G3: Genes, Genomes, Genetics, Vol 7, Iss 1, Pp 129-142 (2017)
G3: Genes, Genomes, Genetics, Vol 7, Iss 1, Pp 129-142 (2017)
Light and the circadian clock have a profound effect on the biology of organisms through the regulation of large sets of genes. Toward understanding how light and the circadian clock regulate gene expression, we used genome-wide approaches to identif
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a5153ae6626824a471df65b5dd626d27
https://doi.org/10.1534/g3.116.034298
https://doi.org/10.1534/g3.116.034298
Autor:
Gwendowlyn S. Knapp, Zhuo Ma, Matthew W. Peterson, James E. Galagan, Anna Lyubetskaya, Kathleen A. McDonough, Antonio L.C. Gomes
Publikováno v:
Nucleic Acids Research
Bacterial pathogens adapt to changing environments within their hosts, and the signaling molecule adenosine 3', 5'-cyclic monophosphate (cAMP) facilitates this process. In this study, we characterized in vivo DNA binding and gene regulation by the cA
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e5085b228c33f67ace8d720f6e52e17d
https://doi.org/10.1093/nar/gkv420
https://doi.org/10.1093/nar/gkv420
Autor:
Cheng Wu, Jeffrey P. Townsend, Ying Zhang, Matthew S. Sachs, Erin L. Bredeweg, Rigzin Dekhang, Kristina M. Smith, Deborah Bell-Pedersen, Xiaoying Zhou, Fei Yang, Michael Freitag, Anna Lyubetskaya, Chandrashekara Mallappa, Jay C. Dunlap, Jeremy Zucker, Matthew W. Peterson, James E. Galagan
Publikováno v:
G3: Genes|Genomes|Genetics
The filamentous fungus Neurospora crassa responds to light in complex ways. To thoroughly study the transcriptional response of this organism to light, RNA-seq was used to analyze capped and polyadenylated mRNA prepared from mycelium grown for 24 hr
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7f7028332eef572c0aff708d1f37254f
https://doi.org/10.1534/g3.114.012617
https://doi.org/10.1534/g3.114.012617
Autor:
James E. Galagan, Jonathan M. Dreyfuss, Chris Mahwinney, Sahadevan Raman, Wen-Han Yu, Yang Liu, Robert P. Mohney, Julie Lamontagne, Irina Glotova, Hans-Joachim Mollenkopf, Linsday Sweet, Tige R. Rustad, Yves Van de Peer, Elham Azizi, Paul Drogaris, Julie Piquenot, Antonio L.C. Gomes, David R. Sherman, Diogo M. Camacho, Brent Honda, Christian Stolte, Adam D. Kennedy, Christopher D. Garay, Matthew W. Peterson, Kyle J. Minch, Thomas Abeel, Sang Tae Park, William Brabant, D. Branch Moody, Daniel Chelsky, Mark J. Hickey, Paul Iazzetti, Andrew S Krueger, Rene Allard, Brian Weiner, Anna Lyubetskaya, Jessica K. Winkler, Gary K. Schoolnik, Yiyong Zhou, Anca Dorhoi, Stefan H. E. Kaufmann, Peter Sisk, Jeremy Zucker, Suma Jaini, Gregory Dolganov
Publikováno v:
Nature. 499:178-183
We have taken the first steps towards a complete reconstruction of the Mycobacterium tuberculosis regulatory network based on ChIP-Seq and combined this reconstruction with system-wide profiling of messenger RNAs, proteins, metabolites and lipids dur
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::463928289c82d4432e2d5d01342cdd9f
https://doi.org/10.1038/nature12337
https://doi.org/10.1038/nature12337
Publikováno v:
BMC Bioinformatics
Background Pathogen metadata includes information about where and when a pathogen was collected and the type of environment it came from. Along with genomic nucleotide sequence data, this metadata is growing rapidly and becoming a valuable resource n
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4e4b69c998167ef19865b3f1075b088d
http://europepmc.org/articles/PMC5025631
http://europepmc.org/articles/PMC5025631
Autor:
James E. Galagan, Lakshmi-Prasad Potluri, Anna Lyubetskaya, Sang Tae Park, Robert N. Husson, Jared D. Sharp, Atul K. Singh, Matthew W. Peterson, Sahadevan Raman, Antonio L.C. Gomes
Publikováno v:
PLoS ONE, Vol 11, Iss 3, p e0152145 (2016)
PLoS ONE
PLoS ONE
Expression of SigH, one of 12 Mycobacterium tuberculosis alternative sigma factors, is induced by heat, oxidative and nitric oxide stresses. SigH activation has been shown to increase expression of several genes, including genes involved in maintaini
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d8d65fdecf6b4a12326d1ffac727bb83
https://doaj.org/article/1bfa65289d2e40f5bfa25a9fe9a112fd
https://doaj.org/article/1bfa65289d2e40f5bfa25a9fe9a112fd