Zobrazeno 1 - 10
of 61
pro vyhledávání: '"Matthew Ung"'
Autor:
Jing Zhang, Donghoon Lee, Vineet Dhiman, Peng Jiang, Jie Xu, Patrick McGillivray, Hongbo Yang, Jason Liu, William Meyerson, Declan Clarke, Mengting Gu, Shantao Li, Shaoke Lou, Jinrui Xu, Lucas Lochovsky, Matthew Ung, Lijia Ma, Shan Yu, Qin Cao, Arif Harmanci, Koon-Kiu Yan, Anurag Sethi, Gamze Gürsoy, Michael Rutenberg Schoenberg, Joel Rozowsky, Jonathan Warrell, Prashant Emani, Yucheng T. Yang, Timur Galeev, Xiangmeng Kong, Shuang Liu, Xiaotong Li, Jayanth Krishnan, Yanlin Feng, Juan Carlos Rivera-Mulia, Jessica Adrian, James R Broach, Michael Bolt, Jennifer Moran, Dominic Fitzgerald, Vishnu Dileep, Tingting Liu, Shenglin Mei, Takayo Sasaki, Claudia Trevilla-Garcia, Su Wang, Yanli Wang, Chongzhi Zang, Daifeng Wang, Robert J. Klein, Michael Snyder, David M. Gilbert, Kevin Yip, Chao Cheng, Feng Yue, X. Shirley Liu, Kevin P. White, Mark Gerstein
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-11 (2020)
ENCODE is a resource comprising thousands of functional genomic datasets. Here, the authors present custom annotation within ENCODE for cancer, highlighting a workflow that can help prioritise key elements in oncogenesis.
Externí odkaz:
https://doaj.org/article/d3ef1766b33842a5aa6bd3194efeba4e
Publikováno v:
PeerJ, Vol 8, p e8797 (2020)
Background The “dark matter” of the genome harbors several non-coding RNA species including Long non-coding RNAs (lncRNAs), which have been implicated in neoplasia but remain understudied. RNA-seq has provided deep insights into the nature of lnc
Externí odkaz:
https://doaj.org/article/d9375399280544b686c04d6ac5587f45
Autor:
William W. Feng, Owen Wilkins, Scott Bang, Matthew Ung, Jiaqi Li, Jennifer An, Carmen del Genio, Kaleigh Canfield, James DiRenzo, Wendy Wells, Arti Gaur, R. Brooks Robey, Jessie Yanxiang Guo, Ryan L. Powles, Christos Sotiriou, Lajos Pusztai, Maria Febbraio, Chao Cheng, William B. Kinlaw, Manabu Kurokawa
Publikováno v:
Cell Reports, Vol 29, Iss 11, Pp 3405-3420.e5 (2019)
Summary: Although it is established that fatty acid (FA) synthesis supports anabolic growth in cancer, the role of exogenous FA uptake remains elusive. Here we show that, during acquisition of resistance to HER2 inhibition, metabolic rewiring of brea
Externí odkaz:
https://doaj.org/article/a14657a83c5e46c19bc58549304e0355
Publikováno v:
PLoS Computational Biology, Vol 9, Iss 7, p e1003132 (2013)
Cell cycle is a complex and highly supervised process that must proceed with regulatory precision to achieve successful cellular division. Despite the wide application, microarray time course experiments have several limitations in identifying cell c
Externí odkaz:
https://doaj.org/article/b51780ab27814e5795a6570970c47d0d
Autor:
Mark A. Israel, Matthew Ung, Chao Cheng, Zhonghua Zhang, Yasuyuki Hitoshi, Huan Liu, Matthew C. Havrda, Cong Ran, Damian A. Almiron Bonnin
PDGFR expression in recurring GFAP/tTA:TRE/hPDGFB allografts resistant to hPDGFB suppression.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::64f723e14e884a32dc27f7d5f43106ee
https://doi.org/10.1158/1535-7163.22508590
https://doi.org/10.1158/1535-7163.22508590
Autor:
James DiRenzo, Chao Cheng, Andrew J. DeCastro, Matthew Ung, Pratima Cherukuri, Amanda L. Balboni
Supplemental Method. Oligonucleotide sequences used to amplify regions of the ID2 regulatory region in ChIP and ChIP-reChIP studies
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::381a60f49ac94f0af43339f5ca8d62c9
https://doi.org/10.1158/1541-7786.22514895
https://doi.org/10.1158/1541-7786.22514895
Autor:
James DiRenzo, Chao Cheng, Andrew J. DeCastro, Matthew Ung, Pratima Cherukuri, Amanda L. Balboni
Supplemental Figure S3. Shared P63 and Smad3 target genes enriched during TGFβ induced EMT. Analysis of shared p63 and Smad3 target genes enriched during a time course of TGFβ induced EMT. Each time point following TGFβ treatment is compared to ti
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6b835a6d91570d6c0a70739c28e0dde8
https://doi.org/10.1158/1541-7786.22514901
https://doi.org/10.1158/1541-7786.22514901
Autor:
Mark A. Israel, Matthew Ung, Chao Cheng, Zhonghua Zhang, Yasuyuki Hitoshi, Huan Liu, Matthew C. Havrda, Cong Ran, Damian A. Almiron Bonnin
Forward and reverse primers sequences.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0db9f192b6597d89f20404fa05f7225e
https://doi.org/10.1158/1535-7163.22508581.v1
https://doi.org/10.1158/1535-7163.22508581.v1
Autor:
Mark A. Israel, Matthew Ung, Chao Cheng, Zhonghua Zhang, Yasuyuki Hitoshi, Huan Liu, Matthew C. Havrda, Cong Ran, Damian A. Almiron Bonnin
Supplementary Figure Legends
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cce8f50e1af49b95c161c07aec04ecef
https://doi.org/10.1158/1535-7163.22508587
https://doi.org/10.1158/1535-7163.22508587
Autor:
Todd W. Miller, Matthew P. Goetz, Chao Cheng, Arminja N. Kettenbach, Eugene Demidenko, Judy C. Boughey, Jia Yu, Krishna R. Kalari, Liewei Wang, Megan A. Zeldenrust, Stephanie C. Liu, Wei Yang, Nicole A. Traphagen, Riley A. Hampsch, Matthew Ung, Jason D. Wells, Kevin Shee
Suppl Data and Methods Fig. S1. Flowchart of experimental approach. Fig. S2. Unsupervised hierarchical clustering of breast or ovarian cancer cell lines confirms known subtypes. Fig. S3. Validation of BR/OV-1 and -2 clusters of BRCA and OVCA cell lin
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1575eb5671b3a3ee12b9fd52e46d41ac
https://doi.org/10.1158/1078-0432.22473524.v1
https://doi.org/10.1158/1078-0432.22473524.v1