Zobrazeno 1 - 10
of 104
pro vyhledávání: '"Matthew Mah"'
Autor:
Swapan Mallick, Adam Micco, Matthew Mah, Harald Ringbauer, Iosif Lazaridis, Iñigo Olalde, Nick Patterson, David Reich
Publikováno v:
Scientific Data, Vol 11, Iss 1, Pp 1-10 (2024)
Abstract More than two hundred papers have reported genome-wide data from ancient humans. While the raw data for the vast majority are fully publicly available testifying to the commitment of the paleogenomics community to open data, formats for both
Externí odkaz:
https://doaj.org/article/da115f75caf14a74906b283eb8f6e3dd
Autor:
Kendra A. Sirak, Daniel M. Fernandes, Mark Lipson, Swapan Mallick, Matthew Mah, Iñigo Olalde, Harald Ringbauer, Nadin Rohland, Carla S. Hadden, Éadaoin Harney, Nicole Adamski, Rebecca Bernardos, Nasreen Broomandkhoshbacht, Kimberly Callan, Matthew Ferry, Ann Marie Lawson, Megan Michel, Jonas Oppenheimer, Kristin Stewardson, Fatma Zalzala, Nick Patterson, Ron Pinhasi, Jessica C. Thompson, Dennis Van Gerven, David Reich
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-14 (2021)
Little is known about the genetic landscape of people living in the Nile region prior to the Islamic migrations of the late 1st millennium CE. Here, the authors report genome-wide data for 66 ancient individuals to investigate the genetic ancestry of
Externí odkaz:
https://doaj.org/article/7ab5d169694645f19daf803054db3508
Publikováno v:
Genome Biology, Vol 21, Iss 1, Pp 1-22 (2020)
Abstract We report a method called ContamLD for estimating autosomal ancient DNA (aDNA) contamination by measuring the breakdown of linkage disequilibrium in a sequenced individual due to the introduction of contaminant DNA. ContamLD leverages the id
Externí odkaz:
https://doaj.org/article/73b44d6b88d74036bf99ebb502c2ad2d
Autor:
Carly Brielle Scott, Nadin Rohland, Anny Cárdenas, Matthew Mah, Vagheesh M. Narasimhan, Christian R Voostra, Mikhail V. Matz, Lauren T. Toth, David Reich
Publikováno v:
Molecular Ecology. 31:4979-4990
Ancient DNA (aDNA) has been applied to evolutionary questions across a wide variety of taxa. Here, we leverage aDNA from millennia-old coral fossil fragments for the first time to gain holistic insights into a rapidly declining western Atlantic reef
Autor:
Swapan Mallick, Adam Micco, Matthew Mah, Harald Ringbauer, Iosif Lazaridis, Iñigo Olalde, Nick Patterson, David Reich
More than two hundred papers have reported genome-wide data from ancient humans. While the raw data for the vast majority are fully publicly available testifying to the commitment of the paleogenomics community to open data, formats for both raw data
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::7c221395ba02e06dbc94e05fcd97c8d8
https://doi.org/10.1101/2023.04.06.535797
https://doi.org/10.1101/2023.04.06.535797
Autor:
Laurie J. Reitsema, Alissa Mittnik, Britney Kyle, Giulio Catalano, Pier Francesco Fabbri, Adam C. S. Kazmi, Katherine L. Reinberger, Luca Sineo, Stefano Vassallo, Rebecca Bernardos, Nasreen Broomandkhoshbacht, Kim Callan, Francesca Candilio, Olivia Cheronet, Elizabeth Curtis, Daniel Fernandes, Martina Lari, Ann Marie Lawson, Matthew Mah, Swapan Mallick, Kirsten Mandl, Adam Micco, Alessandra Modi, Jonas Oppenheimer, Kadir Toykan Özdogan, Nadin Rohland, Kristin Stewardson, Stefania Vai, Chiara Vergata, J. Noah Workman, Fatma Zalzala, Valentina Zaro, Alessandro Achilli, Achilles Anagnostopoulos, Cristian Capelli, Varnavas Constantinou, Hovirag Lancioni, Anna Olivieri, Anastasia Papadopoulou, Nikoleta Psatha, Ornella Semino, John Stamatoyannopoulos, Ioanna Valliannou, Evangelia Yannaki, Iosif Lazaridis, Nick Patterson, Harald Ringbauer, David Caramelli, Ron Pinhasi, David Reich
Publikováno v:
Proceedings of the National Academy of Sciences (PNAS)
Trade and colonization caused an unprecedented increase in Mediterranean human mobility in the first millennium BCE. Often seen as a dividing force, warfare is in fact another catalyst of culture contact. We provide insight into the demographic dynam
Autor:
Yue-Chen Liu, Rosalind Hunter-Anderson, Olivia Cheronet, Joanne Eakin, Frank Camacho, Michael Pietrusewsky, Nadin Rohland, Alexander Ioannidis, J. Stephen Athens, Michele Toomay Douglas, Rona Michi Ikehara-Quebral, Rebecca Bernardos, Brendan J. Culleton, Matthew Mah, Nicole Adamski, Nasreen Broomandkhoshbacht, Kimberly Callan, Ann Marie Lawson, Kirsten Mandl, Megan Michel, Jonas Oppenheimer, Kristin Stewardson, Fatma Zalzala, Kenneth Kidd, Judith Kidd, Theodore G. Schurr, Kathryn Auckland, Adrian V. S. Hill, Alexander J. Mentzer, Consuelo D. Quinto-Cortés, Kathryn Robson, Douglas J. Kennett, Nick Patterson, Carlos D. Bustamante, Andrés Moreno-Estrada, Matthew Spriggs, Miguel Vilar, Mark Lipson, Ron Pinhasi, David Reich
Publikováno v:
Science
Micronesia began to be peopled earlier than other parts of Remote Oceania, but the origins of its inhabitants remain unclear. We generated genome-wide data from 164 ancient and 112 modern individuals. Analysis reveals five migratory streams into Micr
Autor:
Wangwei Cai, Rukesh Shrestha, Masato Nishino, Longli Kang, Olivia Cheronet, Hui Li, Dashtseveg Tumen, Hui-Yuan Yeh, Jianxin Guo, Diimaajav Erdenebaatar, Swapan Mallick, Fatma Zalzala, Ching Jung Huang, Yuri G. Nikitin, Yi Chang Liu, Martine Robbeets, Alexey A. Tishkin, Zhou Yong Sun, Andrei V. Tabarev, Erdene Myagmar, Kimberly Callan, Liang Chen, Hua Du, Kadir T. Özdoğan, Li Jin, Hideaki Kanzawa-Kiriyama, Shi Yan, Enkhbayar Mijiddorj, Hana Looh, Dawei Li, Alexander N. Popov, Tie-Lin Yang, Xiao Ming Wu, Shao-Qing Wen, Ron Pinhasi, Nicole Adamski, Alexey A. Kovalev, Guangmao Xie, Song Lin, Rebecca Bernardos, Megan Michel, Chung Ching Shiung, Xiaomin Yang, Hong-Bing Yao, Guanglin He, Jing Zhao, Kirsten Mandl, Lan-Hai Wei, Chuan-Chao Wang, Tumur Ochir Iderkhangai, Manfei Zhang, Rong Lin, Olga A. Shubina, David Reich, Ling Xiang Wang, Brendan J. Culleton, Laurie Eccles, Kendra Sirak, Dongna Li, Zhao Zhang, Jamsranjav Bayarsaikhan, Richard Chuang, Jiun Yu Liu, Matthew Mah, Rong Hu, Jonas Oppenheimer, Kellie Sara Duffett Carlson, Kristin Stewardson, Nini, Hirofumi Matsumura, Stephan Schiffels, Nadin Rohland, Xi Hu, Johannes Krause, Denise Keating, Francesca Candilio, Ken ichi Shinoda, Ke Wang, Qiongying Deng, Suzanne Freilich, Ann Marie Lawson, Hu Qin Zhang, Nasreen Broomandkhoshbacht, Alexander M. Kim, Douglas J. Kennett
Publikováno v:
Nature
The deep population history of East Asia remains poorly understood owing to a lack of ancient DNA data and sparse sampling of present-day people1,2. Here we report genome-wide data from 166 East Asian individuals dating to between 6000 bc and ad 1000
Publikováno v:
Journal of Lipid Research, Vol 54, Iss 12, Pp 3345-3357 (2013)
Proprotein convertase subtilisin kexin-like 9 (PCSK9) promotes the degradation of low density lipoprotein receptor (LDLR) and plays an important role in regulating plasma LDL-cholesterol levels. We have shown that the epidermal growth factor precurso
Externí odkaz:
https://doaj.org/article/61a7481240244ad49016a38668aec78a
Publikováno v:
Genome research.
The strategy of in-solution enrichment for hundreds of thousands of single-nucleotide polymorphisms (SNPs) has been used to analyze >70% of individuals with genome-scale ancient DNA published to date. This approach makes it economical to study ancien