Zobrazeno 1 - 10
of 24
pro vyhledávání: '"Matthew J. Conroy"'
Autor:
Zhixu Ni, Michele Wölk, Geoff Jukes, Karla Mendivelso Espinosa, Robert Ahrends, Lucila Aimo, Jorge Alvarez-Jarreta, Simon Andrews, Robert Andrews, Alan Bridge, Geremy C. Clair, Matthew J. Conroy, Eoin Fahy, Caroline Gaud, Laura Goracci, Jürgen Hartler, Nils Hoffmann, Dominik Kopczyinki, Ansgar Korf, Andrea F. Lopez-Clavijo, Adnan Malik, Jacobo Miranda Ackerman, Martijn R. Molenaar, Claire O’Donovan, Tomáš Pluskal, Andrej Shevchenko, Denise Slenter, Gary Siuzdak, Martina Kutmon, Hiroshi Tsugawa, Egon L. Willighagen, Jianguo Xia, Valerie B. O’Donnell, Maria Fedorova
Publikováno v:
Nature Methods, 20, 193-204. Nature Publishing Group
Nat Methods
Nat Methods
Recent progress in mass spectrometry (MS) lipidomics has led to a rapid proliferation of studies across biology and biomedicine and facilitating important discoveries. These generate extremely large raw datasets requiring sophisticated tailored solut
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4703f5cdf9d5a93e8e3707020004fffc
https://doi.org/10.1038/s41592-022-01710-0
https://doi.org/10.1038/s41592-022-01710-0
Autor:
Masashi Yokochi, Ju Yaen Kim, Chenghua Shao, John M. Berrisford, Hongyang Yao, Miron Livny, Stephen Anyango, Abhik Mukhopadhyay, Romana Gáborová, Yi-Ping Tao, Monica Sekharan, Aleksandras Gutmanas, Jose M. Dana, Mandar Deshpande, Charmi Bhikadiya, Yannis Ioannidis, Pedro Romero, Jonathan R. Wedell, Eldon L. Ulrich, Gert-Jan Bekker, Chris Randle, Chunxiao Bi, Jeffrey C. Hoch, Nurul Nadzirin, Jaroslav Koča, Yumiko Kengaku, Jasmine Young, Cole Christie, John D. Westbrook, Naohiro Kobayashi, Alexander S. Rose, Sameer Velankar, David Sehnal, Lukáš Pravda, David R. Armstrong, Hasumi Cho, Genji Kurisu, Lora Mak, John L. Markley, Saqib Mir, Sutapa Ghosh, Ardan Patwardhan, Zukang Feng, Stephen K. Burley, Robert Lowe, David S. Goodsell, Hirofumi Suzuki, Maria Voigt, Paul Gane, Jose M. Duarte, Osman Salih, Irina Periskova, Matthew J. Conroy, Toshimichi Fujiwara, Yasuyo Ikegawa, Takahiro Kudou, Dimitri Maziuk, Typhaine Paysan-Lafosse, Brian P. Hudson, Christine Zardecki, Sreenath Nair, Gerard J. Kleywegt, Marina A. Zhuravleva, Shuchismita Dutta, Dmytro Guzenko, Kumaran Baskaran, Rachel Kramer Green, Ezra Peisach, Li Chen, Reiko Yamashita, Vladimir Guranovic, Yu-He Liang, Takeshi Iwata, Atsushi Nakagawa, Haruki Nakamura, Junko Sato, Radka Svobodová Vařeková, Helen M. Berman, Deepti Gupta, Luigi Di Costanzo, Mihaly Varadi, Yana Valasatava
Publikováno v:
Nucleic Acids Research
The Protein Data Bank (PDB) is the single global archive of experimentally determined three-dimensional (3D) structure data of biological macromolecules. Since 2003, the PDB has been managed by the Worldwide Protein Data Bank (wwPDB; wwpdb.org), an i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::270875b3782759eb0deca83927e6993c
https://doi.org/10.1093/nar/gky949
https://doi.org/10.1093/nar/gky949
Autor:
Stephen Anyango, Sanchayita Sen, David Sehnal, Mihaly Varadi, Deepti Gupta, Pauline Haslam, Lora Mak, Matthew J. Conroy, David R. Armstrong, Jose M. Dana, Younes Alhroub, John M. Berrisford, Nurul Nadzirin, Abhik Mukhopadhyay, Aleksandras Gutmanas, Gerard J. Kleywegt, Sameer Velankar, Mandar Deshpande, Saqib Mir, Oliver S. Smart, Alice R. Clark, Typhaine Paysan-Lafosse
Publikováno v:
Nucleic Acids Research
The Protein Data Bank in Europe (PDBe, pdbe.org) is actively engaged in the deposition, annotation, remediation, enrichment and dissemination of macromolecular structure data. This paper describes new developments and improvements at PDBe addressing
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::219259d279ff775b2fd386f52f8932a8
https://doi.org/10.1093/nar/gkx1070
https://doi.org/10.1093/nar/gkx1070
Autor:
Nurul Nadzirin, Stephen Anyango, Mandar Deshpande, Radka SvobodováVařeková, Saqib Mir, Osman Salih, Mihaly Varadi, Gerard J. Kleywegt, David R. Armstrong, Lukáš Pravda, Jose M. Dana, James Tolchard, Preeti Choudhary, Alice R. Clark, Paul Gane, Matthew J. Conroy, Hossam Zaki, Sreenath Nair, Sameer Velankar, Typhaine Paysan-Lafosse, Aleksandras Gutmanas, David Sehnal, Deepti Gupta, Jaroslav Koča, Oliver S. Smart, John M. Berrisford, Abhik Mukhopadhyay, Romana Gáborová, Pauline Haslam, Roisin Dunlop, Lora Mak
Publikováno v:
Nucleic Acids Research
The Protein Data Bank in Europe (PDBe), a founding member of the Worldwide Protein Data Bank (wwPDB), actively participates in the deposition, curation, validation, archiving and dissemination of macromolecular structure data. PDBe supports diverse r
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::236ac72082b916bd123508bb7d267707
https://doi.org/10.1093/nar/gkz990
https://doi.org/10.1093/nar/gkz990
Autor:
Deepti Gupta, David R. Armstrong, Alice R. Clark, John M. Berrisford, Abhik Mukhopadhyay, Matthew J. Conroy
Publikováno v:
Encyclopedia of Bioinformatics and Computational Biology (2)
Structural biology has a long history of making experimental results freely available. The existence of these data in repositories, archives, and other resources, all called protein structure databases, are of great value to the scientific community.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::d1bfe80b8d7faa1f198324e8613e3ee4
https://doi.org/10.1016/b978-0-12-809633-8.20280-x
https://doi.org/10.1016/b978-0-12-809633-8.20280-x
Autor:
Sameer, Velankar, Younes, Alhroub, Anaëlle, Alili, Christoph, Best, Harry C, Boutselakis, Ségolène, Caboche, Matthew J, Conroy, Jose M, Dana, Glen, van Ginkel, Adel, Golovin, Swanand P, Gore, Aleksandras, Gutmanas, Pauline, Haslam, Miriam, Hirshberg, Melford, John, Ingvar, Lagerstedt, Saqib, Mir, Laurence E, Newman, Tom J, Oldfield, Chris J, Penkett, Jorge, Pineda-Castillo, Luana, Rinaldi, Gaurav, Sahni, Grégoire, Sawka, Sanchayita, Sen, Robert, Slowley, Alan Wilter, Sousa da Silva, Antonio, Suarez-Uruena, G Jawahar, Swaminathan, Martyn F, Symmons, Wim F, Vranken, Michael, Wainwright, Gerard J, Kleywegt
Publikováno v:
Nucleic Acids Research
The Protein Data Bank in Europe (PDBe; pdbe.org) is actively involved in managing the international archive of biomacromolecular structure data as one of the partners in the Worldwide Protein Data Bank (wwPDB; wwpdb.org). PDBe also develops new tools
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::909420b807ca0f164a3c162f52dd2f54
https://doi.org/10.1093/nar/gkq985
https://doi.org/10.1093/nar/gkq985
Autor:
Matthew J. Conroy, Sameer Velankar, Saqib Mir, David Sehnal, Adam Midlik, Jaroslav Koča, Mandar Deshpande, Radka Svobodová, Karel Berka
Publikováno v:
Acta Crystallographica Section A Foundations and Advances. 73:C669-C669
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::de5b00feb88b807f3a25ef111d1cc550
https://doi.org/10.1107/s2053273317089045
https://doi.org/10.1107/s2053273317089045
Autor:
Matthew J. Conroy, Sameer Velankar
Publikováno v:
Acta Crystallographica Section A Foundations and Advances. 73:C577-C577
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::6902a39767e2a2c0f21838b5ea909f8b
https://doi.org/10.1107/s2053273317089963
https://doi.org/10.1107/s2053273317089963
Autor:
Jonathan P. Waltho, C. Jeremy Craven, Garry L. Taylor, Matthew J. Conroy, Per A. Bullough, Clare Jelinska, Malcolm F. White, Andrea M. Hounslow
Publikováno v:
Structure. 13:963-971
Organisms growing at elevated temperatures face a particular challenge to maintain the integrity of their genetic material. All thermophilic and hyperthermophilic archaea encode one or more copies of the Alba (Sac10b) gene. Alba is an abundant, dimer
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2fb51be3f572204ed87da90898c840e8
https://doi.org/10.1016/j.str.2005.04.016
https://doi.org/10.1016/j.str.2005.04.016
Autor:
Lee D. Higgins, C. Jeremy Craven, Andrea M. Hounslow, Jonathan P. Waltho, Rosemary A. Staniforth, Anna Sanders, Matthew J. Conroy, Silva Giannini
Publikováno v:
Journal of Molecular Biology. 336:165-178
The cystatins were the first amyloidogenic proteins to be shown to oligomerize through a 3D domain swapping mechanism. Here we show that, under conditions leading to the formation of amyloid deposits, the domain-swapped dimer of chicken cystatin furt
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::aa87c397a05abe22f4cad7504d31c200
https://doi.org/10.1016/j.jmb.2003.12.011
https://doi.org/10.1016/j.jmb.2003.12.011