Zobrazeno 1 - 10
of 12
pro vyhledávání: '"Matt D. B. Halstead"'
Autor:
Poul M. F. Nielsen, Edmund J. Crampin, Matt D. B. Halstead, Sarala M. Wimalaratne, M. T. Cooling, Catherine M. Lloyd
Publikováno v:
Europe PubMed Central
Motivation: The Physiome Project was established in 1997 to develop tools to facilitate international collaboration in the physiological sciences and the sharing of biological models and experimental data. The CellML language was developed to represe
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::98f8574d740c9b7dc6bb374f61544b8a
https://doi.org/10.1093/bioinformatics/btp495
https://doi.org/10.1093/bioinformatics/btp495
Autor:
Andrew L. Miller, Peter Hunter, James R. Lawson, Taishin Nomura, Justin Marsh, Poul M. F. Nielsen, David P. Nickerson, Randall Britten, M. T. Cooling, Tommy Yu, Catherine M. Lloyd, Shankar Subramanium, Daniel A. Beard, Matt D. B. Halstead, Sarala M. Wimalaratne, Alan Garny
Publikováno v:
Philosophical transactions. Series A, Mathematical, physical, and engineering sciences
The development of standards for encoding mathematical models is an important component of model building and model sharing among scientists interested in understanding multi-scale physiological processes. CellML provides such a standard, particularl
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2ddee2a945c4101ece0a75b70fcef66c
http://europepmc.org/articles/PMC3268215
http://europepmc.org/articles/PMC3268215
Publikováno v:
Progress in Biophysics and Molecular Biology. 85:433-450
Advances in biotechnology and experimental techniques have lead to the elucidation of vast amounts of biological data. Mathematical models provide a method of analysing this data; however, there are two issues that need to be addressed: (1) the need
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e33f4a7c21ebbbbcbdcd2f039b2444d0
https://doi.org/10.1016/j.pbiomolbio.2004.01.004
https://doi.org/10.1016/j.pbiomolbio.2004.01.004
Autor:
Matt D. B. Halstead, Poul M. F. Nielsen, Nicolas P. Smith, Merryn H. Tawhai, Peter Hunter, Denis Noble, Edmund J. Crampin
Publikováno v:
Experimental Physiology. 89:1-26
Bioengineering analyses of physiological systems use the computational solution of physical conservation laws on anatomically detailed geometric models to understand the physiological function of intact organs in terms of the properties and behaviour
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::be709bdfd06496a4c2cede1537c569f7
https://doi.org/10.1113/expphysiol.2003.026740
https://doi.org/10.1113/expphysiol.2003.026740
Hindbrain Signal Processing in the Lateral line System of the Dwarf Scorpionfish Scopeana Papillosus
Publikováno v:
ResearcherID
Recordings were made from primary afferent fibres and secondary projection neurones (crest cells) in the mechanosensory lateral line system of the dwarf scorpionfish. Crest cells were identified by antidromic stimulation from the contralateral midbra
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6b637d5f50c2b7c7341df05e09bf5ae8
https://doi.org/10.1242/jeb.199.4.893
https://doi.org/10.1242/jeb.199.4.893
Publikováno v:
Reviews in Fish Biology and Fisheries. 5:399-416
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::2af8c70bc9568ef7ead75c032c6bf5d1
https://doi.org/10.1007/bf01103813
https://doi.org/10.1007/bf01103813
Autor:
Andrew K. Miller, M. T. Cooling, Peter Hunter, James R. Lawson, Dougal Cowan, Matt D. B. Halstead, Randall Britten, Sarala M. Wimalaratne, David P. Nickerson, Poul M. F. Nielsen, Tommy Yu, Alan Garny, Geoff Nunns
Publikováno v:
BMC Bioinformatics
BMC Bioinformatics, Vol 12, Iss 1, p 22 (2011)
BMC Bioinformatics, Vol 12, Iss 1, p 22 (2011)
Background Building repositories of computational models of biological systems ensures that published models are available for both education and further research, and can provide a source of smaller, previously verified models to integrate into a la
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bab08977713fac3aabe48f68a66b8aff
Autor:
Edmund J. Crampin, Matt D. B. Halstead, Catherine M. Lloyd, Sarala M. Wimalaratne, Poul M. F. Nielsen
Publikováno v:
Europe PubMed Central
Motivation: CellML is an implementation-independent model description language for specifying and exchanging biological processes. The focus of CellML is the representation of mathematical formulations of biological processes. The language captures t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6a4d478bc25349e0882b04ae8929b2dd
https://pubmed.ncbi.nlm.nih.gov/19564239
https://pubmed.ncbi.nlm.nih.gov/19564239
Publikováno v:
EMBC
Scopus-Elsevier
Scopus-Elsevier
With the development of standards for the description of experimental data and mathematical models of physiological processes has come the advent of publicly accessible repositories of such descriptions. To make these repositories acceptable to the c
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::12e6601289a7bf6d64ec900f4a36bf0e
https://doi.org/10.1109/iembs.2006.260202
https://doi.org/10.1109/iembs.2006.260202
Autor:
Michael Hucka, Julio Collado-Vides, Nicolas Le Novère, Pedro Mendes, Barry L. Wanner, Edda Klipp, Fabien Campagne, Matt D. B. Halstead, Edmund J. Crampin, Bruce E. Shapiro, Upinder S. Bhalla, Jacky L. Snoep, Poul M. F. Nielsen, Hugh D. Spence, Andrew Finney, Herbert M. Sauro
Publikováno v:
Nature Biotechnology
Most of the published quantitative models in biology are lost for the community because they are either not made available or they are insufficiently characterized to allow them to be reused. The lack of a standard description format, lack of stringe
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::46abead54b3bb81fa50abce3ba2d6163
https://pubmed.ncbi.nlm.nih.gov/16333295
https://pubmed.ncbi.nlm.nih.gov/16333295