Zobrazeno 1 - 10
of 69
pro vyhledávání: '"Massingham Tim"'
Autor:
Massingham Tim, Goldman Nick
Publikováno v:
BMC Bioinformatics, Vol 13, Iss 1, p 145 (2012)
Abstract Background The Exact Call Chemistry for the SOLiD Next-Generation Sequencing platform augments the two-base-encoding chemistry with an additional round of ligation, using an alternative set of probes, that allows some mistakes made when read
Externí odkaz:
https://doaj.org/article/c0215e8b4aa74392a0ae9dc6be613ff6
Publikováno v:
BMC Bioinformatics, Vol 12, Iss 1, p 104 (2011)
Abstract Background The Monte Carlo simulation of sequence evolution is routinely used to assess the performance of phylogenetic inference methods and sequence alignment algorithms. Progress in the field of molecular evolution fuels the need for more
Externí odkaz:
https://doaj.org/article/10131c55683d42e2a5fc2401faf54f1b
In line with the importance of RNA-seq, the bioinformatics community has produced numerous data analysis tools incorporating methods to correct sample-specific biases. However, few advanced simulation tools exist to enable benchmarking of competing c
Externí odkaz:
http://arxiv.org/abs/1308.3172
Publikováno v:
Systematic Biology, 2017 Sep 01. 66(5), 769-785.
Externí odkaz:
https://www.jstor.org/stable/26408996
Autor:
San Mauro, Diego, Gower, David J., Cotton, James A., Zardoya, Rafael, Wilkinson, Mark, Massingham, Tim
Publikováno v:
Systematic Biology, 2012 Jul 01. 61(4), 661-674.
Externí odkaz:
https://www.jstor.org/stable/41677964
The accumulation of genome-scale molecular data sets for nonmodel taxa brings us ever closer to resolving the tree of life of all living organisms. However, despite the depth of data available, a number of studies that each used thousands of genes ha
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______805::9f122f917b01d8d12f3d7d58f6ac96a5
http://doc.rero.ch/record/332681/files/SYSBIO_66_5_769.pdf
http://doc.rero.ch/record/332681/files/SYSBIO_66_5_769.pdf
Autor:
San Mauro, Diego, Gower, David J., Massingham, Tim, Wilkinson, Mark, Zardoya, Rafael, Cotton, James A.
Publikováno v:
Systematic Biology, 2009 Aug 01. 58(4), 425-438.
Externí odkaz:
https://www.jstor.org/stable/25677524
Publikováno v:
Systematic Biology, 2007 Aug 01. 56(4), 609-622.
Externí odkaz:
https://www.jstor.org/stable/20143068
Autor:
Sipos, Botond1 sbotond@ebi.ac.uk, Massingham, Tim1, Stütz, Adrian M.2, Goldman, Nick1, Chunyu Liu3
Publikováno v:
PLoS ONE. Aug2012, Vol. 7 Issue 8, Special section p1-9. 9p.
Autor:
Lindblad-Toh, Kerstin, Garber, Manuel, Zuk, Or, Lin, Michael F, Parker, Brian J, Washietl, Stefan, Kheradpour, Pouya, Ernst, Jason, Jordan, Gregory, Mauceli, Evan, Ward, Lucas D, Lowe, Craig B, Holloway, Alisha K, Clamp, Michele, Gnerre, Sante, Alföldi, Jessica, Beal, Kathryn, Chang, Jean, Clawson, Hiram, Cuff, James, Di Palma, Federica, Fitzgerald, Stephen, Flicek, Paul, Guttman, Mitchell, Hubisz, Melissa J, Jaffe, David B, Jungreis, Irwin, Kent, W James, Kostka, Dennis, Lara, Marcia, Martins, Andre L, Massingham, Tim, Moltke, Ida, Raney, Brian J, Rasmussen, Matthew D, Robinson, Jim, Stark, Alexander, Vilella, Albert J, Wen, Jiayu, Xie, Xiaohui, Zody, Michael C, Broad Institute Sequencing Platform and Whole Genome Assembly Team, Baldwin, Jen, Bloom, Toby, Chin, Chee Whye, Heiman, Dave, Nicol, Robert, Nusbaum, Chad, Young, Sarah, Wilkinson, Jane, Worley, Kim C, Kovar, Christie L, Muzny, Donna M, Gibbs, Richard A, Baylor College of Medicine Human Genome Sequencing Center Sequencing Team, Cree, Andrew, Dihn, Huyen H, Fowler, Gerald, Jhangiani, Shalili, Joshi, Vandita, Lee, Sandra, Lewis, Lora R, Nazareth, Lynne V, Okwuonu, Geoffrey, Santibanez, Jireh, Warren, Wesley C, Mardis, Elaine R, Weinstock, George M, Wilson, Richard K, Genome Institute at Washington University, Delehaunty, Kim, Dooling, David, Fronik, Catrina, Fulton, Lucinda, Fulton, Bob, Graves, Tina, Minx, Patrick, Sodergren, Erica, Birney, Ewan, Margulies, Elliott H, Herrero, Javier, Green, Eric D, Haussler, David, Siepel, Adam, Goldman, Nick, Pollard, Katherine S, Pedersen, Jakob S, Lander, Eric S, Kellis, Manolis
Publikováno v:
Nature, vol 478, iss 7370
The comparison of related genomes has emerged as a powerful lens for genome interpretation. Here we report the sequencing and comparative analysis of 29 eutherian genomes. We confirm that at least 5.5% of the human genome has undergone purifying sele
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::a0d8574d4b46a2745b168a17cdd246c8
https://escholarship.org/uc/item/38v8j6fz
https://escholarship.org/uc/item/38v8j6fz