Marine Sponges as Chloroflexi Hot Spots: Genomic Insights and High-Resolution Visualization of an Abundant and Diverse Symbiotic Clade

Autor: Kristina Bayer, Martin T. Jahn, Beate M. Slaby, Lucas Moitinho-Silva, Ute Hentschel

Publikováno v: mSystems, Vol 3, Iss 6 (2018)

ABSTRACT Members of the widespread bacterial phylum Chloroflexi can dominate high-microbial-abundance (HMA) sponge microbiomes. In the Sponge Microbiome Project, Chloroflexi sequences amounted to 20 to 30% of the total microbiome of certain HMA spong

Externí odkaz: https://doaj.org/article/3a1bfcf4603f4c7cb24c5705a52718b2

Comparative analysis of amplicon and metagenomic sequencing methods reveals key features in the evolution of animal metaorganisms

Autor: Thomas Röder, Daniela Langfeldt, Ryszard Soluch, Femke-Anouska Heinsen, Hanna Domin, Andre Franke, Marc P. Höppner, Nancy Weiland-Bräuer, Cornelia Jaspers, Ateequr Rehman, Thorsten B. H. Reusch, Thomas C. G. Bosch, Malte C. Rühlemann, Tal Dagan, Philipp Rausch, Shauni Doms, Felix Sommer, Ute Hentschel, Sebastian Fraune, Martin T. Jahn, Philip Rosenstiel, Ruth A. Schmitz, John F. Baines, Katja Dierking, Hinrich Schulenburg, Jakob von Frieling, Britt Marie Hermes, Kohar Annie B. Kissoyan, Eva H. Stukenbrock

Publikováno v: Microbiome, Vol 7, Iss 1, Pp 1-19 (2019)
Microbiome
Rausch, P, Rühlemann, M, Hermes, B M, Doms, S, Dagan, T, Dierking, K, Domin, H, Fraune, S, von Frieling, J, Henschel, U, Heinsen, F-A, Höppner, M, Jahn, M T, Jaspers, C, Kissoyan, K A B, Langfeldt, D, Rehman, A, Reusch, T B H, Roeder, T, Schmitz, R A, Schulenburg, H, Soluch, R, Sommer, F, Stukenbrock, E, Weiland-Bräuer, N, Rosenstiel, P, Franke, A, Bosch, T & Baines, J F 2019, ' Comparative analysis of amplicon and metagenomic sequencing methods reveals key features in the evolution of animal metaorganisms ', Microbiome, vol. 7, 133 . https://doi.org/10.1186/s40168-019-0743-1
Rausch, P, Rühlemann, M, Hermes, B M, Doms, S, Dagan, T, Dierking, K, Domin, H, Fraune, S, Von Frieling, J, Hentschel, U, Heinsen, F A, Höppner, M, Jahn, M T, Jaspers, C, Kissoyan, K A B, Langfeldt, D, Rehman, A, Reusch, T B H, Roeder, T, Schmitz, R A, Schulenburg, H, Soluch, R, Sommer, F, Stukenbrock, E, Weiland-Bräuer, N, Rosenstiel, P, Franke, A, Bosch, T & Baines, J F 2019, ' Comparative analysis of amplicon and metagenomic sequencing methods reveals key features in the evolution of animal metaorganisms ', Microbiome, vol. 7, 133 . https://doi.org/10.1101/604314, https://doi.org/10.1186/s40168-019-0743-1
Rausch, P, Rühlemann, M, Hermes, B M, Doms, S, Dagan, T, Dierking, K, Domin, H, Fraune, S, Von Frieling, J, Humeida, U H, Heinsen, F A, Höppner, M, Jahn, M T, Jaspers, C, Kissoyan, K A B, Langfeldt, D, Rehman, A, Reusch, T B H, Roeder, T, Schmitz, R A, Schulenburg, H, Soluch, R, Sommer, F, Stukenbrock, E, Weiland-Bräuer, N, Rosenstiel, P C, Franke, A, Bosch, T & Baines, J F 2020, ' Comparative analysis of amplicon and metagenomic sequencing methods reveals key features in the evolution of animal metaorganisms ', bioRxiv . https://doi.org/10.1101/604314
Microbiome, 7 (1). Art.Nr. 133.

Background The interplay between hosts and their associated microbiome is now recognized as a fundamental basis of the ecology, evolution, and development of both players. These interdependencies inspired a new view of multicellular organisms as “m

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ac9629b536811aa2df83bd9bc6e8f4d3
http://link.springer.com/article/10.1186/s40168-019-0743-1

Decoding cellular dialogues between sponges, bacteria, and phages

Autor: Martin T. Jahn, Lara Schmittmann, Lucía Pita, Ute Hentschel

This chapter covers the current knowledge on interkingdom communication in marine sponge holobionts. Sponges (Porifera) are known to contain dense and diverse microbial symbiotic communities located extracellularly in the sponge tissue. Despite their

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::331fb2dfcacd01e27c578b72068c7689
https://doi.org/10.1201/9780429277375-4

Integrated metabolism in sponge–microbe symbiosis revealed by genome-centered metatranscriptomics

Autor: Ana I. S. Esteves, Torsten Thomas, Giampiero Batani, Lucas Moitinho-Silva, Martin T. Jahn, Cristina Díez-Vives

Publikováno v: The ISME Journal. 11:1651-1666

Despite an increased understanding of functions in sponge microbiomes, the interactions among the symbionts and between symbionts and host are not well characterized. Here we reconstructed the metabolic interactions within the sponge Cymbastela conce

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::119bef5b374973fbb128c155a2626b02
https://doi.org/10.1038/ismej.2017.25

A symbiont phage protein aids in eukaryote immune evasion

Autor: Ute Hentschel, Sebastian M. Markert, Stephanie T. Stengel, Lucía Pita, Ksenia Arkhipova, Anne Kupczok, Bas E. Dutilh, Christian Stigloher, Tim Lachnit, Marta Ribes, Martin T. Jahn, Philip Rosenstiel

Phages are increasingly recognized as important members of host associated microbial communities. While recent studies have revealed vast genomic diversity in the virosphere, the new frontier is to understand how newly discovered phages may affect hi

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9ce9b995670d793fb76c8002e89438a5
https://doi.org/10.1101/608950