Zobrazeno 1 - 10
of 11
pro vyhledávání: '"Martin Hjelmare"'
Autor:
Kuan-Lun Tseng, Casper F. Winsnes, Kevin Hwang, Xuan Cao, Martin Hjelmare, Alexander Kiselev, Yuanhao Wu, Gu Yinzheng, Hongdong Zheng, Sergei Fironov, Shaikat M. Galib, Jun Lan, Constantin Kappel, Emma Lundberg, Dmytro Poplavskiy, Anthony J. Cesnik, Wei Ouyang, Xiaohan Yi, Hao Xu, Russel D. Wolfinger, Dmitry Buslov, Devin P. Sullivan, Jinbin Xie, Cheng Ju, Dmytro Panchenko, Zhifeng Gao, Chuanpeng Li, Park Jinmo, Christof Henkel, Runmin Wei, Shubin Dai, Xun Zhu, Bojan Tunguz, Lovisa Åkesson
Publikováno v:
Nature Methods
Pinpointing subcellular protein localizations from microscopy images is easy to the trained eye, but challenging to automate. Based on the Human Protein Atlas image collection, we held a competition to identify deep learning solutions to solve this t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4cef700d7da73a0f0a1229a040abbfaa
https://doi.org/10.1038/s41592-019-0658-6
https://doi.org/10.1038/s41592-019-0658-6
Publikováno v:
Nature Methods
Nature Methods, 2019, 16 (12), pp.1199-1200. ⟨10.1038/s41592-019-0627-0⟩
Nature Methods, Nature Publishing Group, 2019, 16 (12), pp.1199-1200. ⟨10.1038/s41592-019-0627-0⟩
Nature Methods, 2019, 16 (12), pp.1199-1200. ⟨10.1038/s41592-019-0627-0⟩
Nature Methods, Nature Publishing Group, 2019, 16 (12), pp.1199-1200. ⟨10.1038/s41592-019-0627-0⟩
International audience; Deep learning methods have shown extraordinary potential for analyzing very diverse biomedical data, but their dissemination beyond developers is hindered by important computational hurdles. We introduce ImJoy (https://imjoy.i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::807f79244dab4dc6f9ac03b5a8ea1ad1
http://arxiv.org/abs/1905.13105
http://arxiv.org/abs/1905.13105
Autor:
Charlotte Stadler, Lars Björk, Marie Skogs, Mathias Uhlén, Anthony A. Hyman, Martin Hjelmare, Rutger Schutten, Christian Gnann, Ina Poser, Emma Lundberg
Publikováno v:
Journal of Proteome Research. 16:147-155
Antibodies are indispensible research tools, yet the scientific community has not adopted standardized procedures to validate their specificity. Here we present a strategy to systematically validate antibodies for immunofluorescence (IF) applications
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c7a21e4148a869129f8f34f6ae58850e
https://doi.org/10.1021/acs.jproteome.6b00821
https://doi.org/10.1021/acs.jproteome.6b00821
Autor:
Wei Ouyang, Casper F. Winsnes, Martin Hjelmare, Anthony J. Cesnik, Lovisa Åkesson, Hao Xu, Devin P. Sullivan, Shubin Dai, Jun Lan, Park Jinmo, Shaikat M. Galib, Christof Henkel, Kevin Hwang, Dmytro Poplavskiy, Bojan Tunguz, Russel D. Wolfinger, Yinzheng Gu, Chuanpeng Li, Jinbin Xie, Dmitry Buslov, Sergei Fironov, Alexander Kiselev, Dmytro Panchenko, Xuan Cao, Runmin Wei, Yuanhao Wu, Xun Zhu, Kuan-Lun Tseng, Zhifeng Gao, Cheng Ju, Xiaohan Yi, Hongdong Zheng, Constantin Kappel, Emma Lundberg
Publikováno v:
Nature Methods
Pinpointing subcellular protein localizations from microscopy images is easy to the trained eye, but challenging to automate. Based on the Human Protein Atlas image collection, we held a competition to identify deep learning solutions to solve this t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8e199c2139297e0a5973213c0484dc92
https://doi.org/10.1038/s41592-020-0937-2
https://doi.org/10.1038/s41592-020-0937-2
Autor:
Xiaohan Yi, Anthony J. Cesnik, Kuan-Lun Tseng, Runmin Wei, Park Jinmo, Cheng Ju, Emma Lundberg, Shubin Dai, Jun Lan, Zhifeng Gao, Jinbin Xie, Martin Hjelmare, Dmytro Poplavskiy, Yuanhao Wu, Christof Henkel, Casper F. Winsnes, Hongdong Zheng, Devin P. Sullivan, Gu Yinzheng, Kevin Hwang, Russel D. Wolfinger, Wei Ouyang, Alexander Kiselev, Xun Zhu, Bojan Tunguz, Hao Xu, Lovisa Åkesson, Constantin Kappel, Sergei Fironov, Shaikat M. Galib, Dmitry Buslov, Chuanpeng Li, Xuan Cao, Dmytro Panchenko
Publikováno v:
Nature Methods
An amendment to this paper has been published and can be accessed via a link at the top of the paper.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5b4d184ba555b6b32949b63319a1c139
http://europepmc.org/articles/PMC7000326
http://europepmc.org/articles/PMC7000326
Autor:
Emma Lundberg, Hammou Ait Blal, Marie Skogs, Mathias Uhlén, Charlotte Stadler, Diana Mahdessian, Frida Danielsson, Martin Hjelmare, Mikaela Wiking
Publikováno v:
Journal of Proteome Research. 12:299-307
One of the major challenges of a chromosome-centric proteome project is to explore in a systematic manner the potential proteins identified from the chromosomal genome sequence, but not yet characterized on a protein level. Here, we describe the use
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e5d2e6692878713831ef70e2a305dceb
https://doi.org/10.1021/pr3009308
https://doi.org/10.1021/pr3009308
Autor:
Anna Bäckström, Fredrik Pontén, Jan Mulder, Lisa M. Breckels, Peter Thul, Anna Asplund, Evelina Sjöstedt, Lars Björk, Diana Mahdessian, Casper F. Winsnes, Jenny Fall, Hanna Tegel, Devin P. Sullivan, Rutger Schutten, Fredric Johansson, Mathias Uhlén, Charlotte Stadler, Linn Fagerberg, Kathryn S. Lilley, Martin Hjelmare, Johan Rockberg, Emma Lundberg, Laurent Gatto, Cecilia Lindskog, Christian Gnann, Marie Skogs, Åsa Sivertsson, Aikaterini Geladaki, Martin Zwahlen, Tove Alm, Sophia Hober, Claire M. Mulvey, Adil Mardinoglu, Sunjae Lee, Kalle von Feilitzen, Frida Danielsson, Cheng Zhang, Lovisa Åkesson, Per Oksvold, Mikaela Wiking, Peter Nilsson, Hammou Ait Blal, Jochen M. Schwenk
Publikováno v:
Science (New York, N.Y.). 356(6340)
Mapping the proteome Proteins function in the context of their environment, so an understanding of cellular processes requires a knowledge of protein localization. Thul et al. used immunofluorescence microscopy to map 12,003 human proteins at a singl
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8fa6bdd71fbfe2f2e49a68f818b9c962
https://pubmed.ncbi.nlm.nih.gov/28546174
https://pubmed.ncbi.nlm.nih.gov/28546174
Autor:
Kalle Jonasson, Charlotte Stadler, Mathias Uhlén, Emma Lundberg, Beate Neumann, Rainer Pepperkok, Martin Hjelmare
Publikováno v:
Journal of Proteomics; Vol 75
Journal of Proteomics
Journal of Proteomics
We have developed a platform for validation of antibody binding and protein subcellular localization data obtained from immunofluorescence using siRNA technology combined with automated confocal microscopy and image analysis. By combining the siRNA t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::76a0f7edb6955d55490562e9b39b0509
https://doi.org/10.1016/j.jprot.2012.01.030
https://doi.org/10.1016/j.jprot.2012.01.030
Autor:
Martin Hjelmare, Mathias Uhlén, Marie Skogs, Annica Åbergh, Mikaela Wiking, Emma Lundberg, Charlotte Stadler
Publikováno v:
New Biotechnology. 27:S16-S17
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::97f60f025a1632971ee11b5152e573bf
https://doi.org/10.1016/j.nbt.2010.01.330
https://doi.org/10.1016/j.nbt.2010.01.330
Autor:
Linn Fagerberg, Charlotte Stadler, Marie Skogs, Martin Hjelmare, Kalle Jonasson, Mikaela Wiking, Annica Åbergh, Mathias Uhlén, Emma Lundberg
Publikováno v:
Journal of Proteome Research; Aug2011, Vol. 10 Issue 8, p3766-3777, 12p