Reproducible molecular networking of untargeted mass spectrometry data using GNPS

Autor: Daniel Petras, Aldo Moreno Ulloa, Cristopher A. Boya P., Fernando Vargas, Randy Mojica-Flores, Alan K. Jarmusch, Kunyang Sun, Marcelino Gutiérrez, Kyo Bin Kang, Richard M. Tehan, Mingxun Wang, Robert A. Keyzers, Alexander A. Aksenov, Justin J. J. van der Hooft, Christine M. Aceves, Fidele Tugizimana, Andrew W. Truman, Martin H. Christian, Angela I. Calderón, Javier Andres Tejeda Mora, Johant Lakey-Beitia, Nicole Tayler, Nicole Sikora, Andrés Mauricio Caraballo-Rodríguez, Kelly C. Weldon, Julia M. Gauglitz, Emily C. Gentry, Pieter C. Dorrestein, Yilue Zhang, Nuno Bandeira, Louis-Félix Nothias, Mélissa Nothias-Esposito, Nombuso Ndlovu, Irina Koester, Samuel Bertrand, Allegra T. Aron, Victor Vásquez-Chaves, Robin Schmid, Kerry L. McPhail, Madeleine Ernst, Catherine Roullier, Amina Bouslimani

Publikováno v: Nature protocols, 15, 1954-1991
Nature protocols 15 (2020)
Nature Protocols
Nature Protocols, Nature Publishing Group, 2020, 15 (6), pp.1954-1991. ⟨10.1038/s41596-020-0317-5⟩
Nature Protocols volume 15, pages1954–1991(2020)
Kérwá
Universidad de Costa Rica
instacron:UCR

Global Natural Product Social Molecular Networking (GNPS) is an interactive online small molecule–focused tandem mass spectrometry (MS2) data curation and analysis infrastructure. It is intended to provide as much chemical insight as possible into

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5146b3910a36ac060ac30de7833fdc12
https://doi.org/10.1038/s41596-020-0317-5

Viscosin-like lipopeptides from frog skin bacteria inhibit Aspergillus fumigatus and Batrachochytrium dendrobatidis detected by imaging mass spectrometry and molecular networking.

Autor: Martin H., Christian^1,2 (AUTHOR), Ibáñez, Roberto^3,4 (AUTHOR), Nothias, Louis-Félix⁵ (AUTHOR), Boya P., Cristopher A.^1,2 (AUTHOR), Reinert, Laura K.⁶ (AUTHOR), Rollins-Smith, Louise A.^6,7 (AUTHOR), Dorrestein, Pieter C.⁵ (AUTHOR), Gutiérrez, Marcelino¹ (AUTHOR) mgutierrez@indicasat.org.pa

Publikováno v: Scientific Reports. 2/28/2019, Vol. 9 Issue 1, p1-8. 8p.

A community resource for paired genomic and metabolomic data mining

Autor: Schorn, Michelle A, Verhoeven, Stefan, Ridder, Lars, Huber, Florian, Acharya, Deepa D, Aksenov, Alexander A, Aleti, Gajender, Moghaddam, Jamshid Amiri, Aron, Allegra T, Aziz, Saefuddin, Bauermeister, Anelize, Bauman, Katherine D, Baunach, Martin, Beemelmanns, Christine, Beman, J Michael, Berlanga-Clavero, María Victoria, Blacutt, Alex A, Bode, Helge B, Boullie, Anne, Brejnrod, Asker, Bugni, Tim S, Calteau, Alexandra, Cao, Liu, Carrión, Víctor J, Castelo-Branco, Raquel, Chanana, Shaurya, Chase, Alexander B, Chevrette, Marc G, Costa-Lotufo, Leticia V, Crawford, Jason M, Currie, Cameron R, Cuypers, Bart, Dang, Tam, de Rond, Tristan, Demko, Alyssa M, Dittmann, Elke, Du, Chao, Drozd, Christopher, Dujardin, Jean-Claude, Dutton, Rachel J, Edlund, Anna, Fewer, David P, Garg, Neha, Gauglitz, Julia M, Gentry, Emily C, Gerwick, Lena, Glukhov, Evgenia, Gross, Harald, Gugger, Muriel, Guillén Matus, Dulce G, Helfrich, Eric JN, Hempel, Benjamin-Florian, Hur, Jae-Seoun, Iorio, Marianna, Jensen, Paul R, Kang, Kyo Bin, Kaysser, Leonard, Kelleher, Neil L, Kim, Chung Sub, Kim, Ki Hyun, Koester, Irina, König, Gabriele M, Leao, Tiago, Lee, Seoung Rak, Lee, Yi-Yuan, Li, Xuanji, Little, Jessica C, Maloney, Katherine N, Männle, Daniel, Martin H, Christian, McAvoy, Andrew C, Metcalf, Willam W, Mohimani, Hosein, Molina-Santiago, Carlos, Moore, Bradley S, Mullowney, Michael W, Muskat, Mitchell, Nothias, Louis-Félix, O'Neill, Ellis C, Parkinson, Elizabeth I, Petras, Daniel, Piel, Jörn, Pierce, Emily C, Pires, Karine, Reher, Raphael, Romero, Diego, Roper, M Caroline, Rust, Michael, Saad, Hamada, Saenz, Carmen, Sanchez, Laura M, Sørensen, Søren Johannes, Sosio, Margherita, Süssmuth, Roderich D, Sweeney, Douglas, Tahlan, Kapil, Thomson, Regan J, Tobias, Nicholas J, Trindade-Silva, Amaro E, van Wezel, Gilles P

Publikováno v: Nature chemical biology, vol 17, iss 4

Genomics and metabolomics are widely used to explore specialized metabolite diversity. The Paired Omics Data Platform is a community initiative to systematically document links between metabolome and (meta)genome data, aiding identification of natura

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od_______325::ce4702db9eafe3cf55bd967cf6d21d32
https://escholarship.org/uc/item/4h57c4m0

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