Zobrazeno 1 - 10
of 21
pro vyhledávání: '"Martin, Stražar"'
Autor:
Martin Stražar, Vera P. Mourits, Valerie A. C. M. Koeken, L. Charlotte J. de Bree, Simone J. C. F. M. Moorlag, Leo A. B. Joosten, Reinout van Crevel, Hera Vlamakis, Mihai G. Netea, Ramnik J. Xavier
Publikováno v:
Genome Biology, Vol 22, Iss 1, Pp 1-22 (2021)
Abstract Background The bacillus Calmette-Guérin (BCG) vaccine protects against tuberculosis and heterologous infections but elicits high inter-individual variation in specific and nonspecific, or trained, immune responses. While the gut microbiome
Externí odkaz:
https://doaj.org/article/55e912bb35d948619f632bcf4e2b1b3d
Autor:
Martin Stražar, Godfrey S. Temba, Hera Vlamakis, Vesla I. Kullaya, Furaha Lyamuya, Blandina T. Mmbaga, Leo A. B. Joosten, Andre J. A. M. van der Ven, Mihai G. Netea, Quirijn de Mast, Ramnik J. Xavier
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-15 (2021)
The authors profile stool metagenomics and plasma metabolomics in Tanzanian individuals and uncover a gradient of gut microbial profiles, from rural through urban Tanzania towards Western populations. Integration with ex vivo blood microbial stimulat
Externí odkaz:
https://doaj.org/article/4fabd0c667e74e1cb3314abd5a61efb7
Autor:
Primož Godec, Matjaž Pančur, Nejc Ilenič, Andrej Čopar, Martin Stražar, Aleš Erjavec, Ajda Pretnar, Janez Demšar, Anže Starič, Marko Toplak, Lan Žagar, Jan Hartman, Hamilton Wang, Riccardo Bellazzi, Uroš Petrovič, Silvia Garagna, Maurizio Zuccotti, Dongsu Park, Gad Shaulsky, Blaž Zupan
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-7 (2019)
Deep learning approaches for image preprocessing and analysis offer important advantages, but these are rarely incorporated into user-friendly software. Here the authors present an easy-to-use visual programming toolbox integrating deep-learning and
Externí odkaz:
https://doaj.org/article/8fe78876de9a43e59a6f2f0dc33ed1f8
Autor:
Martin Stražar, Godfrey S. Temba, Hera Vlamakis, Vesla I. Kullaya, Furaha Lyamuya, Blandina T. Mmbaga, Leo A. B. Joosten, Andre J. A. M. van der Ven, Mihai G. Netea, Quirijn de Mast, Ramnik J. Xavier
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-1 (2021)
Externí odkaz:
https://doaj.org/article/038d8aa1cd1c48468112f32abf3b1265
Autor:
Martin Stražar, Godfrey S. Temba, Hera Vlamakis, Vesla I. Kullaya, Furaha Lyamuya, Blandina T. Mmbaga, Leo A. B. Joosten, Andre J. A. M. van der Ven, Mihai G. Netea, Quirijn de Mast, Ramnik J. Xavier
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-1 (2021)
Externí odkaz:
https://doaj.org/article/655a89b7a7cd4b66a58cf07643265820
Autor:
Samuel Goldman, Jeremy Wohlwend, Martin Stražar, Guy Haroush, Ramnik J. Xavier, Connor W. Coley
Metabolomic studies have succeeded in identifying small molecule metabolites that mediate cell signaling, competition, and disease pathology in part due to large-scale community efforts to measure mass spectra for thousands of metabolite standards. N
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c8bc92e8031c7283cb8db4a0220419e1
https://doi.org/10.1101/2022.12.30.522318
https://doi.org/10.1101/2022.12.30.522318
Mucosal and barrier tissues such as the gut, lung or skin, are composed of a complex network of cells and microbes forming a tight niche that prevents pathogen colonization and supports host-microbiome symbiosis. Characterizing these networks at high
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::251b584327b09edb2c3882105cb93330
https://doi.org/10.1101/2022.07.18.500470
https://doi.org/10.1101/2022.07.18.500470
A distinct clade of Bifidobacterium longum in the gut of Bangladeshi children thrives during weaning
Autor:
Tommi Vatanen, Qi Yan Ang, Léa Siegwald, Shafiqul Alam Sarker, Caroline I. Le Roy, Stéphane Duboux, Omar Delannoy-Bruno, Catherine Ngom-Bru, Claire L. Boulangé, Martin Stražar, Julian Avila-Pacheco, Amy Deik, Kerry Pierce, Kevin Bullock, Courtney Dennis, Shamima Sultana, Sharika Sayed, Mahbubar Rahman, Tahmeed Ahmed, Monica Modesto, Paola Mattarelli, Clary B. Clish, Hera Vlamakis, Damian R. Plichta, Olga Sakwinska, Ramnik J. Xavier
Publikováno v:
Cell. 185(23)
The gut microbiome has an important role in infant health and development. We characterized the fecal microbiome and metabolome of 222 young children in Dhaka, Bangladesh during the first two years of life. A distinct Bifidobacterium longum clade exp
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::83a218a5bdb8f69550cc963410c0ae1c
https://pubmed.ncbi.nlm.nih.gov/36323316
https://pubmed.ncbi.nlm.nih.gov/36323316
Autor:
Tommi Vatanen, Karolina S. Jabbar, Terhi Ruohtula, Jarno Honkanen, Julian Avila-Pacheco, Heli Siljander, Martin Stražar, Sami Oikarinen, Heikki Hyöty, Jorma Ilonen, Caroline M. Mitchell, Moran Yassour, Suvi M. Virtanen, Clary B. Clish, Damian R. Plichta, Hera Vlamakis, Mikael Knip, Ramnik J. Xavier
Publikováno v:
Cell. 185(26)
The perinatal period represents a critical window for cognitive and immune system development, promoted by maternal and infant gut microbiomes and their metabolites. Here, we tracked the co-development of microbiomes and metabolomes from late pregnan
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c464977273e955874ef1da8e727d78c0
https://pubmed.ncbi.nlm.nih.gov/36563663
https://pubmed.ncbi.nlm.nih.gov/36563663
Autor:
Simone J.C.F.M. Moorlag, Hera Vlamakis, L. Charlotte J. de Bree, Martin Stražar, Leo A. B. Joosten, Reinout van Crevel, Ramnik J. Xavier, Valerie A. C. M. Koeken, Mihai G. Netea, Vera P. Mourits
Publikováno v:
Genome Biology, 22, 1
Genome Biology, 22
Genome Biology, Vol 22, Iss 1, Pp 1-22 (2021)
Genome Biology
Stražar, M, Mourits, V P, Koeken, V A C M, de Bree, L C J, Moorlag, S J C F M, Joosten, L A B, van Crevel, R, Vlamakis, H, Netea, M G & Xavier, R J 2021, ' The influence of the gut microbiome on BCG-induced trained immunity ', Genome Biology, vol. 22, 275 . https://doi.org/10.1186/s13059-021-02482-0
Genome Biology, 22
Genome Biology, Vol 22, Iss 1, Pp 1-22 (2021)
Genome Biology
Stražar, M, Mourits, V P, Koeken, V A C M, de Bree, L C J, Moorlag, S J C F M, Joosten, L A B, van Crevel, R, Vlamakis, H, Netea, M G & Xavier, R J 2021, ' The influence of the gut microbiome on BCG-induced trained immunity ', Genome Biology, vol. 22, 275 . https://doi.org/10.1186/s13059-021-02482-0
Background The bacillus Calmette-Guérin (BCG) vaccine protects against tuberculosis and heterologous infections but elicits high inter-individual variation in specific and nonspecific, or trained, immune responses. While the gut microbiome is increa
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::224aadfc1d82bac4ce9a03f675a62ac1
https://doi.org/10.1186/s13059-021-02482-0
https://doi.org/10.1186/s13059-021-02482-0