Zobrazeno 1 - 10
of 22
pro vyhledávání: '"Marta Matvienko"'
Autor:
Hamid Ashrafi, Amanda M. Hulse-Kemp, Fei Wang, S. Samuel Yang, Xueying Guan, Don C. Jones, Marta Matvienko, Keithanne Mockaitis, Z. Jeffrey Chen, David M. Stelly, Allen Van Deynze
Publikováno v:
The Plant Genome, Vol 8, Iss 2 (2015)
Upland cotton ( L.) has a narrow germplasm base, which constrains marker development and hampers intraspecific breeding. A pressing need exists for high-throughput single nucleotide polymorphism (SNP) markers that can be readily applied to germplasm
Externí odkaz:
https://doaj.org/article/3644bb5176d442639aa012b517fc0ac0
Autor:
Marta Matvienko, Alexander Kozik, Lutz Froenicke, Dean Lavelle, Belinda Martineau, Bertrand Perroud, Richard Michelmore
Publikováno v:
PLoS ONE, Vol 8, Iss 2, p e55913 (2013)
Several applications of high throughput genome and transcriptome sequencing would benefit from a reduction of the high-copy-number sequences in the libraries being sequenced and analyzed, particularly when applied to species with large genomes. We ad
Externí odkaz:
https://doaj.org/article/4ad0691cc9fd4b78b120e1f26a3f58b9
Autor:
Joseph G. Dubrovsky, Gustavo Rodríguez-Alonso, Marta Matvienko, Pedro E. Lázaro-Mixteco, Mayra L. López-Valle, Svetlana Shishkova, Selene Napsucialy-Mendivil
Publikováno v:
Scientific Reports, Vol 8, Iss 1, Pp 1-11 (2018)
Scientific Reports
Scientific Reports
Many Cactaceae species exhibit determinate growth of the primary root as a consequence of root apical meristem (RAM) exhaustion. The genetic regulation of this growth pattern is unknown. Here, we de novo assembled and annotated the root apex transcri
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8d790783217beb6f36edd90a9af056b1
http://link.springer.com/article/10.1038/s41598-018-26897-1
http://link.springer.com/article/10.1038/s41598-018-26897-1
Autor:
Jason Strever, Richard W Michelmore, Alexander Kozik, Marta Matvienko, John Hvala, Steven J. Knapp, Shunxue Tang, John M. Burke, Mark A. Chapman
Publikováno v:
Theoretical and Applied Genetics. 120:85-91
Due to their highly polymorphic and codominant nature, simple-sequence repeat (SSR) markers are a common choice for assaying genetic diversity and genetic mapping. In this paper, we describe the generation of an expressed-sequence tag (EST) collectio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4a88638035b9414c1e0cef6f8400167d
https://doi.org/10.1007/s00122-009-1161-8
https://doi.org/10.1007/s00122-009-1161-8
Autor:
Steven J. Knapp, Nolan C. Kane, Loren H. Rieseberg, Marta Matvienko, Alexander Kozik, Michael S. Barker, Richard W Michelmore
Publikováno v:
Molecular Biology and Evolution. 25:2445-2455
Of the approximately 250,000 species of flowering plants, nearly one in ten are members of the Compositae (Asteraceae), a diverse family found in almost every habitat on all continents except Antarctica. With an origin in the mid Eocene, the Composit
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::71d6261f55da24c4c9e348af16003141
https://doi.org/10.1093/molbev/msn187
https://doi.org/10.1093/molbev/msn187
Autor:
Z. Jeffrey Chen, Fei Wang, Don C. Jones, Xueying Guan, Allen Van Deynze, Hamid Ashrafi, Keithanne Mockaitis, Amanda M. Hulse-Kemp, Marta Matvienko, S. Samuel Yang, David M. Stelly
Publikováno v:
The Plant Genome, Vol 8, Iss 2 (2015)
Upland cotton (Gossypium hirsutum L.) has a narrow germplasm base, which constrains marker development and hampers intraspecific breeding. A pressing need exists for high-throughput single nucleotide polymorphism (SNP) markers that can be readily app
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::357b98c96c0574cfda7a146d0aeb6188
https://doi.org/10.3835/plantgenome2014.10.0068
https://doi.org/10.3835/plantgenome2014.10.0068
Autor:
David B. Neale, Christine G. Elsik, Marta Matvienko, Konstantin V. Krutovsky, Alexander Kozik
Publikováno v:
Tree Genetics & Genomes. 3:61-70
Putative single-copy genes and conserved ortholog sets (COS) were identified in model plant species thale cress (Arabidopsis thaliana), rice (Oryza sativa ssp. japonica), and poplar [black cottonwood, Populus trichocarpa (Torr. & Gray ex Brayshaw)] a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::b201146f6a1f81cdf2d50dac8a20c62c
https://doi.org/10.1007/s11295-006-0052-2
https://doi.org/10.1007/s11295-006-0052-2
Autor:
Richard W Michelmore, Manjula Govindarajulu, Joan Wong, Marta Matvienko, Huaqin Xu, Urszula Piskurewicz, Tadeusz Wroblewski, Alexander Kozik, Belinda Martineau
Publikováno v:
RNA (New York, N.Y.), vol 20, iss 12
The experimental induction of RNA silencing in plants often involves expression of transgenes encoding inverted repeat (IR) sequences to produce abundant dsRNAs that are processed into small RNAs (sRNAs). These sRNAs are key mediators of post-transcr
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a5c31f919a66d429778c179322d48027
https://europepmc.org/articles/PMC4238362/
https://europepmc.org/articles/PMC4238362/
Autor:
Christian D. Haudenschild, Blake C. Meyers, Jianchang Ning, Marta Matvienko, Shivakundan Singh Tej, Hassan Ghazal, Vikas Agrawal, Tam H. Vu
Publikováno v:
Nature Biotechnology. 22:1006-1011
Large-scale sequencing of short mRNA-derived tags can establish the qualitative and quantitative characteristics of a complex transcriptome. We sequenced 12,304,362 tags from five diverse libraries of Arabidopsis thaliana using massively parallel sig
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::672db42484b66dfa2183bdc81a391399
https://doi.org/10.1038/nbt992
https://doi.org/10.1038/nbt992
Publikováno v:
Plant Physiology and Biochemistry. 40:265-272
Quinones are widespread secondary metabolites that function as signal molecules between organisms in the rhizosphere. Quinones are particularly important in the exchange of chemical signals between plant roots, a phenomenon classically termed allelop
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::b114625421724471fcf2e5c253adf783
https://doi.org/10.1016/s0981-9428(02)01361-x
https://doi.org/10.1016/s0981-9428(02)01361-x