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Emergence of an early SARS-CoV-2 epidemic in the United States.

Autor: Zeller M; Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA 92037, USA., Gangavarapu K; Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA 92037, USA., Anderson C; Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA 92037, USA., Smither AR; Department of Microbiology and Immunology, School of Medicine, Tulane University, New Orleans, LA 70112, USA., Vanchiere JA; Department of Pediatrics, Louisiana State University Health Sciences Center - Shreveport, Shreveport, LA 71130, USA., Rose R; BioInfoExperts LLC, Thibodaux, Louisiana, USA., Snyder DJ; Department of Microbiology and Molecular Genetics, University of Pittsburgh, School of Medicine, Pittsburgh, PA, 15219, USA.; Center for Evolutionary Biology and Medicine, University of Pittsburgh, Pittsburgh, PA, 15219, USA., Dudas G; Gothenburg Global Biodiversity Centre (GGBC), Gothenburg, Sweden., Watts A; Li Ka Shing Knowledge Institute, St. Michael's Hospital, Toronto, Canada.; Bluedot, Toronto, Canada., Matteson NL; Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA 92037, USA., Robles-Sikisaka R; Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA 92037, USA., Marshall M; Department of Civil and Systems Engineering, Johns Hopkins University, Baltimore, MD, USA., Feehan AK; Ochsner Clinic Foundation, New Orleans, Louisiana, USA., Sabino-Santos G Jr; Department of Tropical Medicine, School of Public Health and Tropical Medicine, Tulane University, New Orleans, LA 70112, USA.; Centre for Virology Research, Ribeirão Preto Medical School, University of Sao Paulo, Ribeirao Preto, SP 14049900, Brazil., Bell-Kareem AR; Department of Microbiology and Immunology, School of Medicine, Tulane University, New Orleans, LA 70112, USA., Hughes LD; Department of Integrative, Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA., Alkuzweny M; Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA 92037, USA., Snarski P; Heart and Vascular Institute, John W. Deming Department of Medicine, School of Medicine, Tulane University, New Orleans, LA 70112, USA.; Department of Physiology, Tulane University School of Medicine, New Orleans, LA 70112, USA; Department of Pediatrics, School of Medicine, University of California San Diego, La Jolla, California, USA., Garcia-Diaz J; Ochsner Clinic Foundation, New Orleans, Louisiana, USA., Scott RS; Department of Microbiology and Immunology, Louisiana State University Health Science Center Shreveport, Shreveport, LA 71103, USA; Center for Microbiome Innovation, Jacobs School of Engineering, University of California San Diego, La Jolla, California, USA., Melnik LI; Department of Microbiology and Immunology, School of Medicine, Tulane University, New Orleans, LA 70112, USA., Klitting R; Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA 92037, USA., McGraw M; Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA 92037, USA., Belda-Ferre P; Department of Physiology, Tulane University School of Medicine, New Orleans, LA 70112, USA; Department of Pediatrics, School of Medicine, University of California San Diego, La Jolla, California, USA.; Department of Microbiology and Immunology, Louisiana State University Health Science Center Shreveport, Shreveport, LA 71103, USA; Center for Microbiome Innovation, Jacobs School of Engineering, University of California San Diego, La Jolla, California, USA., DeHoff P; Department of Obstetrics, Gynecology, and Reproductive Science, University of California, San Diego, La Jolla, CA 92037, USA., Sathe S; Department of Cellular and Molecular Medicine, University of California at San Diego, La Jolla, California 92093, USA.; Stem Cell Program, University of California San Diego, La Jolla, CA 92093, USA., Marotz C; Department of Physiology, Tulane University School of Medicine, New Orleans, LA 70112, USA; Department of Pediatrics, School of Medicine, University of California San Diego, La Jolla, California, USA.; Scripps Institution of Oceanography, University of California San Diego, La Jolla, California, USA., Grubaugh N; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA., Nolan DJ; BioInfoExperts LLC, Thibodaux, Louisiana, USA., Drouin AC; Department of Microbiology and Immunology, School of Medicine, Tulane University, New Orleans, LA 70112, USA.; Department of Physiology, Tulane University School of Medicine, New Orleans, LA 70112, USA; Department of Pediatrics, School of Medicine, University of California San Diego, La Jolla, California, USA., Genemaras KJ; Department of Microbiology and Immunology, School of Medicine, Tulane University, New Orleans, LA 70112, USA.; Bioinnovation Program, Tulane University, New Orleans, LA 70118, USA., Chao K; Department of Microbiology and Immunology, School of Medicine, Tulane University, New Orleans, LA 70112, USA.; Bioinnovation Program, Tulane University, New Orleans, LA 70118, USA., Topol S; Scripps Research Translational Institute, La Jolla, CA 92037, USA., Spencer E; Scripps Research Translational Institute, La Jolla, CA 92037, USA., Nicholson L; Scripps Research Translational Institute, La Jolla, CA 92037, USA., Aigner S; Department of Cellular and Molecular Medicine, University of California at San Diego, La Jolla, California 92093, USA.; Stem Cell Program, University of California San Diego, La Jolla, CA 92093, USA.; Institute for Genomic Medicine, University of California, San Diego, La Jolla, California, USA., Yeo GW; Department of Cellular and Molecular Medicine, University of California at San Diego, La Jolla, California 92093, USA.; Stem Cell Program, University of California San Diego, La Jolla, CA 92093, USA.; Institute for Genomic Medicine, University of California, San Diego, La Jolla, California, USA., Farnaes L; Rady Children's Institute for Genomic Medicine, San Diego, CA 92123, USA; Rady Children's Hospital, San Diego, CA 92123, USA., Hobbs CA; Rady Children's Institute for Genomic Medicine, San Diego, CA 92123, USA; Rady Children's Hospital, San Diego, CA 92123, USA., Laurent LC; Department of Obstetrics, Gynecology, and Reproductive Science, University of California, San Diego, La Jolla, CA 92037, USA., Knight R; Department of Physiology, Tulane University School of Medicine, New Orleans, LA 70112, USA; Department of Pediatrics, School of Medicine, University of California San Diego, La Jolla, California, USA.; Department of Microbiology and Immunology, Louisiana State University Health Science Center Shreveport, Shreveport, LA 71103, USA; Center for Microbiome Innovation, Jacobs School of Engineering, University of California San Diego, La Jolla, California, USA.; Department of Computer Science and Engineering, Jacobs School of Engineering, University of California San Diego, La Jolla, California, USA.; Department of Bioengineering, University of California San Diego, La Jolla, California, USA., Hodcroft EB; Biozentrum, University of Basel, Basel, Switzerland., Khan K; Li Ka Shing Knowledge Institute, St. Michael's Hospital, Toronto, Canada.; Bluedot, Toronto, Canada.; Department of Medicine, University of Toronto, Toronto, Canada., Fusco DN; Department of Tropical Medicine, School of Public Health and Tropical Medicine, Tulane University, New Orleans, LA 70112, USA.; Department of Medicine, Tulane University School of Medicine, 1430 Tulane Avenue, New Orleans, LA, 70114, USA., Cooper VS; Department of Microbiology and Molecular Genetics, University of Pittsburgh, School of Medicine, Pittsburgh, PA, 15219, USA.; Center for Evolutionary Biology and Medicine, University of Pittsburgh, Pittsburgh, PA, 15219, USA., Lemey P; Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Belgium.; Global Virology Network., Gardner L; Department of Civil and Systems Engineering, Johns Hopkins University, Baltimore, MD, USA., Lamers SL; BioInfoExperts LLC, Thibodaux, Louisiana, USA., Kamil JP; Department of Microbiology and Immunology, Louisiana State University Health Science Center Shreveport, Shreveport, LA 71103, USA; Center for Microbiome Innovation, Jacobs School of Engineering, University of California San Diego, La Jolla, California, USA., Garry RF; Department of Microbiology and Immunology, School of Medicine, Tulane University, New Orleans, LA 70112, USA.; Zalgen Labs LLC, Germantown, MD, USA., Suchard MA; Department of Biostatistics, Fielding School of Public Health, University of California, Los Angeles, Los Angeles, CA 90095, USA.; Department of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA 90095, USA., Andersen KG; Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA 92037, USA.; Scripps Institution of Oceanography, University of California San Diego, La Jolla, California, USA.

Publikováno v: MedRxiv : the preprint server for health sciences [medRxiv] 2021 Feb 08. Date of Electronic Publication: 2021 Feb 08.