Zobrazeno 1 - 9 of 9 pro vyhledávání: '"Marouane Ben Jelloul"'
1
Identify drug repurposing candidates by mining the Protein Data Bank
Autor: Laetitia Chanas-Martin, François Delfaud, Stewart A. Adcock, Marouane Ben Jelloul, Stéphane Richard, Fabrice Moriaud, Jean-Sébastien Surgand
Publikováno v: Briefings in Bioinformatics. 12:336-340
Predicting off-targets by computational methods is gaining increasing interest in early-stage drug discovery. Here, we present a computational method based on full 3D comparisons of 3D structures. When a similar binding site is detected in the Protei
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::abcc1aea43ae28ad0a88b7d007e0f483
https://doi.org/10.1093/bib/bbr017
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2
Towards complete validated models in the next generation ofARP/wARP
Autor: Francisco J. Fernandez, Marouane Ben Jelloul, Richard J. Morris, Serge X. Cohen, Venkataraman Parthasarathy, Gerard J. Kleywegt, Anastassis Perrakis, Mattheos Kakaris, Victor S. Lamzin
Publikováno v: Acta Crystallographica Section D: Biological Crystallography
Acta Crystallographica Section D: Biological Crystallography, International Union of Crystallography, 2004, 60 (12), pp.2222-2229. ⟨10.1107/S0907444904027556⟩
The design of a new versatile control system that will underlie future releases of the automated model-building package ARP/wARP is presented. A sophisticated expert system is under development that will transform ARP/wARP from a very useful model-bu
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c6fc5b3fb27946e9ebd713d7ba594090
https://doi.org/10.1107/s0907444904027556
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3
ARP/wARP and molecular replacement: the next generation
Autor: Fei Long, Alexei A. Vagin, Victor S. Lamzin, Puck Knipscheer, Garib N. Murshudov, Marouane Ben Jelloul, Anastassis Perrakis, Titia K. Sixma, Serge X. Cohen, Joyce H.G. Lebbink
Publikováno v: Acta Crystallographica Section D: Biological Crystallography
Acta Crystallographica Section D: Biological Crystallography, 64(1), 49-60. John Wiley & Sons Inc.
Acta Crystallographica Section D: Biological Crystallography, International Union of Crystallography, 2008, 64 (1), pp.49-60. ⟨10.1107/S0907444907047580⟩
A systematic test shows how ARP/wARP deals with automated model building for structures that have been solved by molecular replacement. A description of protocols in the flex-wARP control system and studies of two specific cases are also presented.
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::dec7bb4b139017bfd0819be2345d0b22
https://pubmed.ncbi.nlm.nih.gov/18094467
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4
Co-expression of protein complexes in prokaryotic and eukaryotic hosts: experimental procedures, database tracking and case studies
Autor: Arnaud Poterszman, Didier Busso, Natacha Rochel, Christophe Romier, Dino Moras, Valeria De Marco, Puck Knipscheer, Tamar Unger, Anastassis Perrakis, Titia K. Sixma, Gretel Buchwald, Evangelos Christodoulou, Marouane Ben Jelloul, Valerie Notenboom, Serge X. Cohen, Joyce H.G. Lebbink, Joel L. Sussman, Patrick H.N. Celie, Shira Albeck, Suzan van Gerwen
Publikováno v: Acta Crystallographica Section D: Biological Crystallography
Acta Crystallographica Section D: Biological Crystallography, International Union of Crystallography, 2006, 62 (Pt 10), pp.1232-42. ⟨10.1107/S0907444906031003⟩
Acta Crystallographica Section D: Biological Crystallography, 62(10), 1232-1242. John Wiley & Sons Inc.
Structure determination and functional characterization of macromolecular complexes requires the purification of the different subunits in large quantities and their assembly into a functional entity. Although isolation and structure determination of
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::860d9aae1aed0b057563fdb6ed820dc2
https://hal.archives-ouvertes.fr/hal-00188127
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5
Akademický článek
Identify drug repurposing candidates by mining the Protein Data Bank.
Autor: Moriaud, Fabrice, Richard, Stéphane B., Adcock, Stewart A., Chanas-Martin, Laetitia, Surgand, Jean-Sébastien, Ben Jelloul, Marouane, Delfaud, François
Publikováno v: Briefings in Bioinformatics. Jul2011, Vol. 12 Issue 4, p336-340. 5p. 1 Color Photograph, 2 Diagrams.
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7
Akademický článek
SPINE workshop on automated X-ray analysis: a progress report.
Autor: Bahar, M.1, Ballard, C.2, Cohen, S. X.3, Cowtan, K. D.4, Dodson, E. J.4, Emsley, P.4, Esnouf, R. M.1, Keegan, R.2, Lamzin, V.5, Langer, G.5, Levdikov, V.4, Long, F.4, Meier, C.1, Muller, A.4, Murshudov, G. N.4, Perrakis, A.3, Siebold, C.1, Stein, N.2, Turkenburg, M. G. W.4, Vagin, A. A.4
Publikováno v: Acta Crystallographica: Section D (Wiley-Blackwell). Oct2006, Vol. 62 Issue 10, p1170-1183. 14p.
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8
Akademický článek
Towards rationalization of crystallization screening for small- to medium-sized academic laboratories: the PACT/JCSG+ strategy.
Autor: Newman, Janet, Egan, David1, Walter, Thomas S.2, Meged, Ran3, Berry, Ian2, Jelloul, Marouane Ben, Sussman, Joel L.1, Stuart, David I.2, Perrakis, Anastassis1 a.perrakis@nki.nl
Publikováno v: Acta Crystallographica: Section D (Wiley-Blackwell). Oct2005, Vol. 61 Issue 10, p1426-1431. 6p.
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9
Akademický článek
Towards complete validated models in the next generation of ARP/wARP.
Autor: Cohen, Serge X.1, Morris, Richard J.2, Fernandez, Francisco J.1,3, Ben Jelloul, Marouane1, Kakaris, Mattheos1, Parthasarathy, Venkataraman3, Lamzin, Victor S.3, Kleywegt, Gerard J.4, Perrakis, Anastassis1 a.perrakis@nki.nl
Publikováno v: Acta Crystallographica: Section D (Wiley-Blackwell). Dec2004 Part 1, Vol. 60 Issue 12p1, p2222-2229. 8p.
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