Zobrazeno 1 - 10
of 18
pro vyhledávání: '"Mark Rojas"'
Autor:
Mark Rojas, Georgiy Golovko, Kamil Khanipov, Levent Albayrak, Sergei Chumakov, B Montgomery Pettitt, Alex Y Strongin, Yuriy Fofanov
Publikováno v:
PLoS ONE, Vol 10, Iss 6, p e0127799 (2015)
The NCI-60 human tumor cell line panel has been used in a broad range of cancer research over the last two decades. A landmark 2013 whole exome sequencing study of this panel added an exceptional new resource for cancer biologists. The complementary
Externí odkaz:
https://doaj.org/article/88e4d30478a9427f8fff103270faac8f
Autor:
Levent Albayrak, James A. Dennett, Grant L. Hughes, Miguel A Saldana, Kamil Khanipov, Maria Pimenova, Emily A. Hornett, Mark Rojas, Greg C. Motl, Yuriy Fofanov, Chris L. Fredregill, George Golovko, Shivanand Hegde, Mustapha Debboun
Microbial interactions are an underappreciated force in shaping insect microbiome communities. Although pairwise patterns of symbiont interactions have been identified, we have a poor understanding regarding the scale and the nature of co-occurrence
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::002ed25322ffd84e6075d5d2bd7e571c
https://doi.org/10.1101/337311
https://doi.org/10.1101/337311
Autor:
Sergei Chumakov, Kamil Khanipov, Mark Rojas, Yuriy Fofanov, Levent Albayrak, George Golovko, Renato Salomon Arroyo Duarte, Maria Pimenova, William R. Widger, T. Pickthall
Microbial activities have detrimental effects on industrial infrastructure. If not controlled, microbial presence can result in corrosion, biofilm formation, and product degradation. Serial dilution tests are routinely used for evaluating presence an
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1d16d3a9b98b8a470c4fe5a8a01a9b59
https://doi.org/10.1101/323139
https://doi.org/10.1101/323139
Autor:
Tiffany F. Kautz, Dedeke Rockx-Brouwer, Edward I Patterson, Kamil Khanipov, Yuriy Fofanov, Georgiy Golovko, Naomi L. Forrester, Levent Albayrak, Mark Rojas
Publikováno v:
Virus Evolution
Viral diversity is theorized to play a significant role during virus infections, particularly for arthropod-borne viruses (arboviruses) that must infect both vertebrate and invertebrate hosts. To determine how viral diversity influences mosquito infe
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8df70dd7dce0eac0493cc41a3337d816
https://pubmed.ncbi.nlm.nih.gov/29479479
https://pubmed.ncbi.nlm.nih.gov/29479479
Autor:
Michael Kosoy, Yuriy Fofanov, George Golovko, Maria Pimenova, Kamil Khanipov, Mark Rojas, Levent Albayrak
Publikováno v:
BIBE
Bacterial adaptation through gene loss and acquisition are the fundamental mechanisms that determine the structure of the core and pan genomes. One of the challenges in identifying homologous genes required for the description of core and pan genomes
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::cf8a3f0b47682fcad753a63a6ec652a7
https://doi.org/10.1109/bibe.2017.00-46
https://doi.org/10.1109/bibe.2017.00-46
Autor:
Yuriy Fofanov, Mark Rojas, Nicholas A. Be, Crystal Jaing, Viacheslav Y. Fofanov, George Golovko, Jonathan E. Allen, Heather Koshinsky, James B. Thissen
Publikováno v:
Microbial Ecology
The organisms in aerosol microenvironments, especially densely populated urban areas, are relevant to maintenance of public health and detection of potential epidemic or biothreat agents. To examine aerosolized microorganisms in this environment, we
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::156e1f5df7904a0665d363e59aeac51b
http://europepmc.org/articles/PMC4312561
http://europepmc.org/articles/PMC4312561
Autor:
Kamil Khanipov, Yuriy Fofanov, Sanjeev K. Sahni, Hema P. Narra, Abha Sahni, Mark Rojas, Casey L. C. Schroeder
Publikováno v:
Scientific Reports
Small regulatory RNAs comprise critically important modulators of gene expression in bacteria, yet very little is known about their prevalence and functions in Rickettsia species. R. conorii, the causative agent of Mediterranean spotted fever, is a t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::43197b5e945f94bbaa262ff9b5d26f12
Autor:
Mark Rojas, Riya Shah, Hema P. Narra, Yuriy Fofanov, Abha Sahni, Sanjeev K. Sahni, Casey L. C. Schroeder, Kamil Khanipov, Jignesh Patel
Publikováno v:
Frontiers in Microbiology
Emerging evidence implicates a critically important role for bacterial small RNAs (sRNAs) as post-transcriptional regulators of physiology, metabolism, stress/adaptive responses, and virulence, but the roles of sRNAs in pathogenic Rickettsia species
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0cfd2bb5e831dd6afb68d9a556124179
http://europepmc.org/articles/PMC4896933
http://europepmc.org/articles/PMC4896933
Autor:
Levent Albayrak, Yuriy Fofanov, Nels A. Olson, Otto Dobretsberger, Georgiy Golovko, Maria Pimenova, Mark Rojas, Sergei Chumakov, Kamil Khanipov
Publikováno v:
BIBM
The storage, manipulation, and especially internet transfer of large amounts of data produced by High-Throughput Sequencing (HTS) instruments present major obstacles to utilizing the full potential of this promising technology. The current standard i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::60223a147b7dd5f3c2bc2d3004508be9
https://doi.org/10.1109/bibm.2015.7359838
https://doi.org/10.1109/bibm.2015.7359838
Autor:
Todd Z. DeSantis, Ping Hu, Keith Keller, Philip Hugenholtz, Gary L. Andersen, Thomas Huber, Daniel Dalevi, Mark Rojas, Eoin L. Brodie, Neils Larsen
Publikováno v:
Applied and Environmental Microbiology. 72:5069-5072
A 16S rRNA gene database ( http://greengenes.lbl.gov ) addresses limitations of public repositories by providing chimera screening, standard alignment, and taxonomic classification using multiple published taxonomies. It was found that there is incon
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5b019eef386753833502fd75802c8710
https://doi.org/10.1128/aem.03006-05
https://doi.org/10.1128/aem.03006-05