Zobrazeno 1 - 10
of 40
pro vyhledávání: '"Mariusz Jaskólski"'
Publikováno v:
Frontiers in Molecular Biosciences, Vol 7 (2020)
We performed a PDB-wide survey of proteins to assess their cavity content, using the SPACEBALL algorithm to calculate the cavity volumes. In addition, we determined the hydropathy character of the cavities. We demonstrate that the cavities of most pr
Externí odkaz:
https://doaj.org/article/901e845d68584a2ba9ffdd55591c7538
Publikováno v:
Nauka.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::35e677227c22ae52fab577d3412709ba
https://doi.org/10.24425/nauka.2023.144949
https://doi.org/10.24425/nauka.2023.144949
Autor:
Alexander Wlodawer, Zbigniew Dauter, Pawel Rubach, Wladek Minor, Joanna I. Loch, Dariusz Brzezinski, Miroslaw Gilski, Mariusz Jaskolski
Publikováno v:
IUCrJ, Vol 11, Iss 6, Pp 966-976 (2024)
The absence of solvent molecules in high-resolution protein crystal structure models deposited in the Protein Data Bank (PDB) contradicts the fact that, for proteins crystallized from aqueous media, water molecules are always expected to bind to the
Externí odkaz:
https://doaj.org/article/34e7ad461dbc4d8db9c0437fa3c8e9c6
Autor:
Julian C.-H. Chen, Miroslaw Gilski, Changsoo Chang, Dominika Borek, Gerd Rosenbaum, Alex Lavens, Zbyszek Otwinowski, Maciej Kubicki, Zbigniew Dauter, Mariusz Jaskolski, Andrzej Joachimiak
Publikováno v:
IUCrJ, Vol 11, Iss 5, Pp 649-663 (2024)
Ultrahigh-resolution structures provide unprecedented details about protein dynamics, hydrogen bonding and solvent networks. The reported 0.70 Å, room-temperature crystal structure of crambin is the highest-resolution ambient-temperature structure o
Externí odkaz:
https://doaj.org/article/e26b3d5c70764b7eac47872354be1d15
Autor:
Marta Ignasiak-Kciuk, Karolina Nowicka-Bauer, Marta Grzechowiak, Tina Ravnsborg, Kamil Frąckowiak, Ole N. Jensen, Mariusz Jaskólski, Bronisław Marciniak
Publikováno v:
Free radical biology and medicine 198, 27-43 (2023). doi:10.1016/j.freeradbiomed.2023.01.022
Free radical biology and medicine 198, 27 - 43 (2023). doi:10.1016/j.freeradbiomed.2023.01.022
The mechanisms of one-electron protein oxidation are complicated and still not well-understood. In this work, we investigated the reaction of sensitiz
The mechanisms of one-electron protein oxidation are complicated and still not well-understood. In this work, we investigated the reaction of sensitiz
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4f4a4450e0ad6f0d7fec986ea23abcf7
https://bib-pubdb1.desy.de/record/585109
https://bib-pubdb1.desy.de/record/585109
Autor:
Laura Dabos, Joanna E. Raczynska, Pierre Bogaerts, Agustin Zavala, Delphine Girlich, Remy A. Bonnin, Laurent Dortet, Aurélie Peyrat, Pascal Retailleau, Bogdan I. Iorga, Mariusz Jaskólski, Youri Glupczynski, Thierry Naas
Publikováno v:
Antimicrobial agents and chemotherapy, Vol. 67, no.2, p. e0109522 (2023)
Antimicrobial Agents and Chemotherapy
Antimicrobial Agents and Chemotherapy, 2023, 67 (2), pp.e0109522. ⟨10.1128/aac.01095-22⟩
Antimicrobial Agents and Chemotherapy
Antimicrobial Agents and Chemotherapy, 2023, 67 (2), pp.e0109522. ⟨10.1128/aac.01095-22⟩
International audience; OXA-48-producing Enterobacterales have now widely disseminated throughout the world. Several variants have now been reported, differing by just a few amino-acid substitutions or deletions, mostly in the region of the loop β5-
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b3979854c5a25bd7c63b48e87b581d8b
https://hdl.handle.net/2078.1/273292
https://hdl.handle.net/2078.1/273292
Autor:
Karolina Nowicka-Bauer, Marta Ignasiak-Kciuk, Marta Grzechowiak, Tina Ravensborg, Kamil Frąckowiak, Ole N. Jensen, Mariusz Jaskólski, Bronisław Marciniak
Publikováno v:
Free Radical Biology and Medicine. 201:40
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::71dde7514ddbf290b8ed9dd97f0c42e4
https://doi.org/10.1016/j.freeradbiomed.2023.03.229
https://doi.org/10.1016/j.freeradbiomed.2023.03.229
Autor:
Emilia Iłowska, Jakub Barciszewski, Mariusz Jaskólski, Augustyn Moliński, Maciej Kozak, Aneta Szymańska
Publikováno v:
International Journal of Molecular Sciences; Volume 23; Issue 10; Pages: 5800
Amyloid fibrils have been known for many years. Unfortunately, their fame stems from negative aspects related to amyloid diseases. Nevertheless, due to their properties, they can be used as interesting nanomaterials. Apart from their remarkable stabi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e036083b8d61082dce61fa9b9f71c0ee
https://pubmed.ncbi.nlm.nih.gov/35628610
https://pubmed.ncbi.nlm.nih.gov/35628610
Autor:
Kinga Pokrywka, Marta Grzechowiak, Joanna Sliwiak, Paulina Worsztynowicz, Joanna I. Loch, Milosz Ruszkowski, Miroslaw Gilski, Mariusz Jaskolski
Publikováno v:
Frontiers in Chemistry, Vol 12 (2024)
ReAV, the inducible Class-3 L-asparaginase from the nitrogen-fixing symbiotic bacterium Rhizobium etli, is an interesting candidate for optimizing its enzymatic potential for antileukemic applications. Since it has no structural similarity to known e
Externí odkaz:
https://doaj.org/article/effdee2962954cadb411e19d05ca9610
Autor:
Joanna Sliwiak, Paulina Worsztynowicz, Kinga Pokrywka, Joanna I. Loch, Marta Grzechowiak, Mariusz Jaskolski
Publikováno v:
Frontiers in Chemistry, Vol 12 (2024)
L-Asparaginases, divided into three structural Classes, catalyze the hydrolysis of L-asparagine to L-aspartic acid and ammonia. The members of Class 3, ReAIV and ReAV, encoded in the genome of the nitrogen fixing Rhizobium etli, have the same fold, a
Externí odkaz:
https://doaj.org/article/3a0d808633184a3cb22ff775949393da