Zobrazeno 1 - 10
of 25
pro vyhledávání: '"Marisol A. Ramirez Solano"'
Autor:
Austin N. Southard-Smith, Alan J. Simmons, Bob Chen, Angela L. Jones, Marisol A. Ramirez Solano, Paige N. Vega, Cherie’ R. Scurrah, Yue Zhao, Michael J. Brenan, Jiekun Xuan, Martha J. Shrubsole, Ely B. Porter, Xi Chen, Colin J. H. Brenan, Qi Liu, Lauren N. M. Quigley, Ken S. Lau
Publikováno v:
BMC Genomics, Vol 21, Iss 1, Pp 1-15 (2020)
Abstract Background The increasing demand of single-cell RNA-sequencing (scRNA-seq) experiments, such as the number of experiments and cells queried per experiment, necessitates higher sequencing depth coupled to high data quality. New high-throughpu
Externí odkaz:
https://doaj.org/article/85d9c14a13754f6b9a913a50e3805c93
Autor:
Ryan M. Allen, Shilin Zhao, Marisol A. Ramirez Solano, Wanying Zhu, Danielle L. Michell, Yuhuan Wang, Yu Shyr, Praveen Sethupathy, MacRae F. Linton, Gregory A. Graf, Quanhu Sheng, Kasey C. Vickers
Publikováno v:
Journal of Extracellular Vesicles, Vol 7, Iss 1 (2018)
To comprehensively study extracellular small RNAs (sRNA) by sequencing (sRNA-seq), we developed a novel pipeline to overcome current limitations in analysis entitled, “Tools for Integrative Genome analysis of Extracellular sRNAs (TIGER)”. To demo
Externí odkaz:
https://doaj.org/article/7a35d40986b3418c892ee4a7ab71ad1e
Autor:
Jia Li, Alan J. Simmons, Caroline V. Hawkins, Sophie Chiron, Marisol A. Ramirez-Solano, Naila Tasneem, Harsimran Kaur, Yanwen Xu, Frank Revetta, Paige N. Vega, Shunxing Bao, Can Cui, Regina N. Tyree, Larry W. Raber, Anna N. Conner, Jennifer M. Pilat, Justin Jacobse, Kara M. McNamara, Margaret M. Allaman, Gabriella A. Raffa, Alain P. Gobert, Mohammad Asim, Jeremy A. Goettel, Yash A. Choksi, Dawn B. Beaulieu, Robin L. Dalal, Sara N. Horst, Baldeep S. Pabla, Yuankai Huo, Bennett A. Landman, Joseph T. Roland, Elizabeth A. Scoville, David A. Schwartz, M. Kay Washington, Yu Shyr, Keith T. Wilson, Lori A. Coburn, Ken S. Lau, Qi Liu
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-19 (2024)
Abstract Crohn’s disease (CD) is a complex chronic inflammatory disorder with both gastrointestinal and extra-intestinal manifestations associated immune dysregulation. Analyzing 202,359 cells from 170 specimens across 83 patients, we identify a di
Externí odkaz:
https://doaj.org/article/0ba81d63e38741479e8c66302f19cf18
Publikováno v:
STAR Protocols, Vol 2, Iss 2, Pp 100450- (2021)
Summary: Single-cell RNA sequencing data require several processing procedures to arrive at interpretable results. While commercial platforms can serve as “one-stop shops” for data analysis, they relinquish the flexibility required for customized
Externí odkaz:
https://doaj.org/article/30a75f4ed09e4a2a875ae1bdffa4b74b
Autor:
Cody N. Heiser, Alan J. Simmons, Frank Revetta, Eliot T. McKinley, Marisol A. Ramirez-Solano, Jiawei Wang, Justin Shao, Gregory D. Ayers, Yu Wang, Sarah E. Glass, Harsimran Kaur, Andrea Rolong, Bob Chen, Paige N. Vega, Julia L. Drewes, Nabil Saleh, Simon Vandekar, Angela L. Jones, M. Kay Washington, Joseph T. Roland, Cynthia L. Sears, Qi Liu, Martha J. Shrubsole, Robert J. Coffey, Ken S. Lau
Colorectal cancer exhibits dynamic cellular and genetic heterogeneity during progression from precursor lesions toward malignancy. Leveraging spatial molecular information to construct a phylogeographic map of tumor evolution can reveal individualize
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::f125eec2cdb2d01b8f5b8cc75194818e
https://doi.org/10.1101/2023.03.09.530832
https://doi.org/10.1101/2023.03.09.530832
Autor:
Justin M M Cates, Qi Liu, Robert J. Matusik, Connor M Forbes, Ginger L. Milne, Dale E. Bjorling, Renjie Jin, Zunyi Y Wang, Marisol A. Ramirez-Solano, Douglas W. Strand, Stephanie C. Sanchez, Nicole L. Miller, Thomas C. Case
Publikováno v:
Prostate
Background Little is known about how benign prostatic hyperplasia (BPH) develops and why patients respond differently to medical therapy designed to reduce lower urinary tract symptoms (LUTS). The Medical Therapy of Prostatic Symptoms (MTOPS) trial r
Autor:
Ming-Zhi Zhang, Cynthia L. Toth, Wanying Zhu, Suwan Wang, Shirong Cao, Yinqiu Wang, Ryan M. Allen, Yu Pan, Danielle Contreras, Andrew S. Terker, Kasey C. Vickers, Xiaofeng Fan, Quanhu Sheng, Aolei Niu, Danielle L. Michell, Marisol A. Ramirez Solano, Raymond C. Harris, Agnes B. Fogo
Publikováno v:
Diabetes
Podocyte injury is important in development of diabetic nephropathy (DN). Although several studies have reported single cell-based RNA-seq of podocytes in type 1 DN (T1DN), the podocyte translating mRNA profile in type 2 DN (T2DN) has not been previo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::19532fc9d49877630fe5f642ad89e4d5
https://doi.org/10.2337/figshare.14888034
https://doi.org/10.2337/figshare.14888034
Publikováno v:
STAR Protocols, Vol 2, Iss 2, Pp 100450-(2021)
STAR Protocols
STAR Protocols
Summary Single-cell RNA sequencing data require several processing procedures to arrive at interpretable results. While commercial platforms can serve as “one-stop shops” for data analysis, they relinquish the flexibility required for customized
Autor:
Zhi-Qi Xu, Jianyong Zhong, Marisol A. Ramirez Solano, MacRae F. Linton, Kasey C. Vickers, Valentina Kon, Carrie B. Wiese, Quanhu Sheng, Youmin Zhang, Wanying Zhu
Publikováno v:
Atherosclerosis
Background and aims Cardiovascular disease (CVD) is the leading cause of death in chronic kidney disease (CKD) patients, however, the underlying mechanisms that link CKD and CVD are not fully understood and limited treatment options exist in this hig
Autor:
Marisol A. Ramirez Solano, Carine Beysen, Ryan M. Allen, Leslie R Sedgeman, Scott M. Turner, Kasey C. Vickers
Publikováno v:
American Journal of Physiology-Gastrointestinal and Liver Physiology. 315:G810-G823
Colesevelam is a bile acid sequestrant approved to treat both hyperlipidemia and type 2 diabetes, but the mechanism for its glucose-lowering effects is not fully understood. The aim of this study was to investigate the role of hepatic microRNAs (miRN