Evaluation of AFLPs for germplasm fingerprinting and assessment of genetic diversity in cultivars of tomato (Lycopersicon esculentum L.)

Autor: Young-Hoon Park, Marilyn A. L. West, Dina A. St. Clair

Publikováno v: Genome. 47:510-518

Cultivated tomato (L. esculentum L.) germplasm exhibits limited genetic variation compared with wild Lycopersicon species. Amplified fragment length polymorphism (AFLP) markers were used to evaluate genetic variation among 74 cultivars, primarily fro

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f4dff67c0ead12d28f742ed7156b737b
https://doi.org/10.1139/g04-004

Natural variation among Arabidopsis thaliana accessions for transcriptome response to exogenous salicylic acid

Autor: Kyunga Kim, Richard W Michelmore, Dina A. St. Clair, Marilyn A. L. West, Daniel J. Kliebenstein, Hans C. van Leeuwen, Remco M. P. Van Poecke, Fumiaki Katagiri, Rebecca W. Doerge

Publikováno v: The Plant cell. 19(7)

Little is known about how gene expression variation within a given species controls phenotypic variation under different treatments or environments. Here, we surveyed the transcriptome response of seven diverse Arabidopsis thaliana accessions in resp

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c75cbaa29a9c6c6ba22390d527a6a3bf
https://pubmed.ncbi.nlm.nih.gov/17630278

Identification of QTLs Controlling Gene Expression Networks Defined a Priori

Autor: Dina A. St. Clair, Rebecca W. Doerge, Olivier Loudet, Hans C. van Leeuwen, Daniel J. Kliebenstein, Marilyn A. L. West

Publikováno v: Department of Statistics Faculty Publications
BMC bioinformatics, vol 7, iss 1
BMC Bioinformatics
BMC Bioinformatics, BioMed Central, 2006, 7 (308), n.p. ⟨10.1186/1471-2105-7-308⟩
BMC Bioinformatics, Vol 7, Iss 1, p 308 (2006)
BMC Bioinformatics 308 (7), n.p.. (2006)

Background Gene expression microarrays allow the quantification of transcript accumulation for many or all genes in a genome. This technology has been utilized for a range of investigations, from assessments of gene regulation in response to genetic

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::340372dda76d1b68477402e05d9c25fe
http://docs.lib.purdue.edu/cgi/viewcontent.cgi?article=1003&context=statpubs

Genomic survey of gene expression diversity in Arabidopsis thaliana

Autor: Dina A. St. Clair, Kyunga Kim, Richard W Michelmore, Marilyn A. L. West, Hans C. van Leeuwen, Rebecca W. Doerge, Daniel J. Kliebenstein

Publikováno v: Genetics. 172(2)

Differential gene expression controls variation in numerous plant traits, such as flowering time and plant/pest interactions, but little is known about the genomic distribution of the determinants of transcript levels and their associated variation.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eb5820412dbad43138757daec8e9ed9d
https://pubmed.ncbi.nlm.nih.gov/16204207

Arabidopsis LEAFY COTYLEDON1 is sufficient to induce embryo development in vegetative cells

Autor: Masa-aki Ohto, Robert L. Fischer, Tamar Lotan, Marilyn A. L. West, Kazutoshi Yamagishi, Russell S. Lo, John J. Harada, Robert B. Goldberg, Raymond W. Kwong, Kelly Matsudaira Yee

Publikováno v: Cell. 93(7)

The Arabidopsis LEAFY COTYLEDON1 (LEC1) gene is required for the specification of cotyledon identity and the completion of embryo maturation. We isolated the LEC1 gene and showed that it functions at an early developmental stage to maintain embryonic

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::36d0d09ce0c2d194b6650fa9b7f56f84
https://pubmed.ncbi.nlm.nih.gov/9657152