Zobrazeno 1 - 10
of 50
pro vyhledávání: '"Marike Palmer"'
Autor:
William B. Whitman, Maria Chuvochina, Brian P. Hedlund, Konstantinos T. Konstantinidis, Marike Palmer, Luis M. Rodriguez‐R, Iain Sutcliffe, Fengping Wang
Publikováno v:
mLife, Vol 3, Iss 1, Pp 1-13 (2024)
Abstract The SeqCode, formally called the Code of Nomenclature of Prokaryotes Described from Sequence Data, is a new code of nomenclature in which genome sequences are the nomenclatural types for the names of prokaryotic species. While similar to the
Externí odkaz:
https://doaj.org/article/1c192a1b0d29457c9e94fc3a05080c8d
Autor:
Jonathan K. Covington, Nicole Torosian, Allison M. Cook, Marike Palmer, Scott G. Bryan, Nancy O. Nou, Ritesh Mewalal, Miranda Harmon-Smith, Ian K. Blaby, Jan-Fang Cheng, Matthias Hess, Phillip J. Brumm, Nitin K. Singh, Kasthuri Venkateswaran, Brian P. Hedlund
Publikováno v:
Frontiers in Microbiology, Vol 15 (2024)
The aerobic hyperthermophile “Fervidibacter sacchari” catabolizes diverse polysaccharides and is the only cultivated member of the class “Fervidibacteria” within the phylum Armatimonadota. It encodes 117 putative glycoside hydrolases (GHs), i
Externí odkaz:
https://doaj.org/article/c9d177b4cfd84087b9adf9873a6ee38e
Autor:
Katherine C. Crosby, Mariah Rojas, Parul Sharma, Marcela A. Johnson, Reza Mazloom, Brian H. Kvitko, Theo H. M. Smits, Stephanus N. Venter, Teresa A. Coutinho, Lenwood S. Heath, Marike Palmer, Boris A. Vinatzer
Publikováno v:
Frontiers in Microbiology, Vol 14 (2023)
As the name of the genus Pantoea (“of all sorts and sources”) suggests, this genus includes bacteria with a wide range of provenances, including plants, animals, soils, components of the water cycle, and humans. Some members of the genus are path
Externí odkaz:
https://doaj.org/article/76ee312198f642b2bf148164947f05f4
Autor:
Yuan-Guo Xie, Zhen-Hao Luo, Bao-Zhu Fang, Jian-Yu Jiao, Qi-Jun Xie, Xing-Ru Cao, Yan-Ni Qu, Yan-Lin Qi, Yang-Zhi Rao, Yu-Xian Li, Yong-Hong Liu, Andrew Li, Cale Seymour, Marike Palmer, Brian P. Hedlund, Wen-Jun Li, Zheng-Shuang Hua
Publikováno v:
Microbiome, Vol 10, Iss 1, Pp 1-13 (2022)
Abstract Background Candidatus Nanohaloarchaeota, an archaeal phylum within the DPANN superphylum, is characterized by limited metabolic capabilities and limited phylogenetic diversity and until recently has been considered to exclusively inhabit hyp
Externí odkaz:
https://doaj.org/article/7a98d389e4b84cc994b98df2cdbd9e30
Autor:
Steffen Buessecker, Marike Palmer, Dengxun Lai, Joshua Dimapilis, Xavier Mayali, Damon Mosier, Jian-Yu Jiao, Daniel R. Colman, Lisa M. Keller, Emily St. John, Michelle Miranda, Cristina Gonzalez, Lizett Gonzalez, Christian Sam, Christopher Villa, Madeline Zhuo, Nicholas Bodman, Fernando Robles, Eric S. Boyd, Alysia D. Cox, Brian St. Clair, Zheng-Shuang Hua, Wen-Jun Li, Anna-Louise Reysenbach, Matthew B. Stott, Peter K. Weber, Jennifer Pett-Ridge, Anne E. Dekas, Brian P. Hedlund, Jeremy A. Dodsworth
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-13 (2022)
Trace metals have been an important ingredient for life throughout Earth’s history. Here, the authors show that a member of an elusive archaeal lineage (Caldarchaeales or Aigarchaeota) requires tungsten for growth, and provide evidence that tungste
Externí odkaz:
https://doaj.org/article/2b7232bce59e491991864facdcf5638d
Autor:
Yan-Ni Qu, Yang-Zhi Rao, Yan-Ling Qi, Yu-Xian Li, Andrew Li, Marike Palmer, Brian P. Hedlund, Wen-Sheng Shu, Paul N. Evans, Guo-Xing Nie, Zheng-Shuang Hua, Wen-Jun Li
Publikováno v:
Cell Reports, Vol 42, Iss 3, Pp 112158- (2023)
Summary: The biology of Korarchaeia remains elusive due to the lack of genome representatives. Here, we reconstruct 10 closely related metagenome-assembled genomes from hot spring habitats and place them into a single species, proposed herein as Pang
Externí odkaz:
https://doaj.org/article/a482af97907c4b4ea6ec2f51cdcd87bc
Autor:
Jinfeng Pang, Marike Palmer, Henry J. Sun, Cale O. Seymour, Ling Zhang, Brian P. Hedlund, Fanjiang Zeng
Publikováno v:
Frontiers in Microbiology, Vol 12 (2021)
Bacteria in root nodules of legumes play important roles in promoting plant growth. In this study, we investigated root nodule-associated bacteria isolated from leguminous plants along an elevation gradient on the northern slope of the Kunlun Mountai
Externí odkaz:
https://doaj.org/article/ae5240afd24a4a96aff877e4b2aa3814
Autor:
Marike Palmer, Brian P. Hedlund, Simon Roux, Philippos K. Tsourkas, Ryan K. Doss, Casey Stamereilers, Astha Mehta, Jeremy A. Dodsworth, Michael Lodes, Scott Monsma, Tijana Glavina del Rio, Thomas W. Schoenfeld, Emiley A. Eloe-Fadrosh, David A. Mead
Publikováno v:
Frontiers in Microbiology, Vol 11 (2020)
Despite the high abundance of Aquificae in many geothermal systems, these bacteria are difficult to culture and no viruses infecting members of this phylum have been isolated. Here, we describe the complete, circular dsDNA Uncultivated Virus Genome (
Externí odkaz:
https://doaj.org/article/c24b5461008e423a80c5445e2e7e09cb
Autor:
Marike Palmer, Stephanus N. Venter, Alistair R. McTaggart, Martin P.A. Coetzee, Stephanie Van Wyk, Juanita R. Avontuur, Chrizelle W. Beukes, Gerda Fourie, Quentin C. Santana, Magriet A. Van Der Nest, Jochen Blom, Emma T. Steenkamp
Publikováno v:
PeerJ, Vol 7, p e6698 (2019)
With the increased availability of genome sequences for bacteria, it has become routine practice to construct genome-based phylogenies. These phylogenies have formed the basis for various taxonomic decisions, especially for resolving problematic rela
Externí odkaz:
https://doaj.org/article/2c738682cb524949bca2684dd192a902
Autor:
Chrizelle W. Beukes, Marike Palmer, Puseletso Manyaka, Wai Y. Chan, Juanita R. Avontuur, Elritha van Zyl, Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, Dimitrios Stamatis, T. B. K. Reddy, Chris Daum, Nicole Shapiro, Victor Markowitz, Natalia Ivanova, Nikos Kyrpides, Tanja Woyke, Jochen Blom, William B. Whitman, Stephanus N. Venter, Emma T. Steenkamp
Publikováno v:
Frontiers in Microbiology, Vol 9 (2018)
Externí odkaz:
https://doaj.org/article/f1a75360504a4465ac04d82b9bba1257